RNA–Protein interactions for RNA: ENST00000534242.5

SHARPIN-209, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 2

Gene SHARPIN, Length 933 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-209ENST00000534242 SNHG28P0DPA3 235 aa26.88■■□□□ 1.89
SHARPIN-209ENST00000534242 SDSP20132 328 aa26.88■■□□□ 1.89
SHARPIN-209ENST00000534242 GRIN2CQ14957 1233 aa26.88■■□□□ 1.89
SHARPIN-209ENST00000534242 PWP2Q15269 919 aaKnown RBP26.88■■□□□ 1.89
SHARPIN-209ENST00000534242 DUSP28Q4G0W2 176 aa26.88■■□□□ 1.89
SHARPIN-209ENST00000534242 SLC30A10Q6XR72 485 aa26.88■■□□□ 1.89
SHARPIN-209ENST00000534242 ZNF365Q70YC5 407 aa26.88■■□□□ 1.89
SHARPIN-209ENST00000534242 TIFAQ96CG3 184 aa26.88■■□□□ 1.89
SHARPIN-209ENST00000534242 RNF41Q9H4P4 317 aaPredicted RBP26.88■■□□□ 1.89
SHARPIN-209ENST00000534242 PNMA2Q9UL42 364 aa26.88■■□□□ 1.89
SHARPIN-209ENST00000534242 MFAP1P55081 439 aaKnown RBP26.87■■□□□ 1.89
SHARPIN-209ENST00000534242 PSMC6P62333 389 aa26.87■■□□□ 1.89
SHARPIN-209ENST00000534242 HIPK3Q9H422 1215 aa26.87■■□□□ 1.89
SHARPIN-209ENST00000534242 RWDD1Q9H446 243 aaPredicted RBP26.87■■□□□ 1.89
SHARPIN-209ENST00000534242 NEDD4P46934 1319 aa26.87■■□□□ 1.89
SHARPIN-209ENST00000534242 CALML3P27482 149 aa26.86■■□□□ 1.89
SHARPIN-209ENST00000534242 RNF207Q6ZRF8 634 aa26.86■■□□□ 1.89
SHARPIN-209ENST00000534242 CHD1LQ86WJ1 897 aa26.86■■□□□ 1.89
SHARPIN-209ENST00000534242 ESR2Q92731 530 aa26.86■■□□□ 1.89
SHARPIN-209ENST00000534242 WDR11Q9BZH6 1224 aa26.86■■□□□ 1.89
SHARPIN-209ENST00000534242 ZNF576Q9H609 170 aa26.86■■□□□ 1.89
SHARPIN-209ENST00000534242 IL23AQ9NPF7 189 aa26.86■■□□□ 1.89
SHARPIN-209ENST00000534242 UMODL1Q5DID0 1318 aa26.86■■□□□ 1.89
SHARPIN-209ENST00000534242 WDR19Q8NEZ3 1342 aa26.86■■□□□ 1.89
SHARPIN-209ENST00000534242 RBM47A0AV96 593 aaKnown RBP26.85■■□□□ 1.89
SHARPIN-209ENST00000534242 B4GALT4O60513 344 aa26.85■■□□□ 1.89
SHARPIN-209ENST00000534242 PLEKHM2Q8IWE5 1019 aa26.85■■□□□ 1.89
SHARPIN-209ENST00000534242 ZKSCAN3Q9BRR0 538 aa26.85■■□□□ 1.89
SHARPIN-209ENST00000534242 PBX4Q9BYU1 374 aa26.85■■□□□ 1.89
SHARPIN-209ENST00000534242 TRPV6Q9H1D0 765 aa26.85■■□□□ 1.89
SHARPIN-209ENST00000534242 OSBPL3Q9H4L5 887 aa26.85■■□□□ 1.89
SHARPIN-209ENST00000534242 GRXCR1A8MXD5 290 aa26.84■■□□□ 1.89
SHARPIN-209ENST00000534242 ZNF213O14771 459 aa26.84■■□□□ 1.89
SHARPIN-209ENST00000534242 PBX2P40425 430 aa26.84■■□□□ 1.89
SHARPIN-209ENST00000534242 RPS6P62753 249 aaKnown RBP26.84■■□□□ 1.89
SHARPIN-209ENST00000534242 NOC4LQ9BVI4 516 aaKnown RBP26.84■■□□□ 1.89
SHARPIN-209ENST00000534242 CUL9Q8IWT3 2517 aa26.84■■□□□ 1.89
SHARPIN-209ENST00000534242 NUCB1Q02818 461 aa26.83■■□□□ 1.89
SHARPIN-209ENST00000534242 GPATCH4Q5T3I0 446 aaKnown RBP26.83■■□□□ 1.89
SHARPIN-209ENST00000534242 DGKHQ86XP1 1220 aa26.83■■□□□ 1.89
SHARPIN-209ENST00000534242 HERVK_113Q902F9 699 aa26.83■■□□□ 1.89
SHARPIN-209ENST00000534242 IGHDP01880 384 aa26.82■■□□□ 1.88
SHARPIN-209ENST00000534242 GOLGA8HP0CJ92 632 aa26.82■■□□□ 1.88
SHARPIN-209ENST00000534242 CCL23P55773 120 aa26.82■■□□□ 1.88
SHARPIN-209ENST00000534242 CWC27Q6UX04 472 aaKnown RBP26.82■■□□□ 1.88
SHARPIN-209ENST00000534242 MPHOSPH6Q99547 160 aaKnown RBP26.82■■□□□ 1.88
SHARPIN-209ENST00000534242 ALDH8A1Q9H2A2 487 aaPredicted RBP26.82■■□□□ 1.88
SHARPIN-209ENST00000534242 POLR3EQ9NVU0 708 aa26.82■■□□□ 1.88
SHARPIN-209ENST00000534242 FGBP02675 491 aa26.81■■□□□ 1.88
SHARPIN-209ENST00000534242 EDNRBP24530 442 aa26.81■■□□□ 1.88
SHARPIN-209ENST00000534242 NT5C2P49902 561 aa26.81■■□□□ 1.88
SHARPIN-209ENST00000534242 CPT1AP50416 773 aa26.81■■□□□ 1.88
SHARPIN-209ENST00000534242 PURAQ00577 322 aaKnown RBP26.81■■□□□ 1.88
SHARPIN-209ENST00000534242 PDE4DQ08499 809 aa26.81■■□□□ 1.88
SHARPIN-209ENST00000534242 DNERQ8NFT8 737 aa26.81■■□□□ 1.88
SHARPIN-209ENST00000534242 OR6J1Q8NGC5 347 aa26.81■■□□□ 1.88
SHARPIN-209ENST00000534242 WNT8AQ9H1J5 351 aa26.81■■□□□ 1.88
SHARPIN-209ENST00000534242 MTIF3Q9H2K0 278 aaKnown RBP26.81■■□□□ 1.88
SHARPIN-209ENST00000534242 CPVLQ9H3G5 476 aa26.81■■□□□ 1.88
SHARPIN-209ENST00000534242 CXXC1Q9P0U4 656 aaPredicted RBP26.81■■□□□ 1.88
SHARPIN-209ENST00000534242 EYSQ5T1H1 3165 aa26.8■■□□□ 1.88
SHARPIN-209ENST00000534242 USH1GQ495M9 461 aa26.8■■□□□ 1.88
SHARPIN-209ENST00000534242 UBA5Q9GZZ9 404 aa26.8■■□□□ 1.88
SHARPIN-209ENST00000534242 DIAPH3Q9NSV4 1193 aa26.8■■□□□ 1.88
SHARPIN-209ENST00000534242 KDM4AO75164 1064 aa26.79■■□□□ 1.88
SHARPIN-209ENST00000534242 MYL3P08590 195 aa26.79■■□□□ 1.88
SHARPIN-209ENST00000534242 PPP2R5BQ15173 497 aa26.79■■□□□ 1.88
SHARPIN-209ENST00000534242 CCDC178Q5BJE1 867 aa26.79■■□□□ 1.88
SHARPIN-209ENST00000534242 IQCA1Q86XH1 822 aa26.79■■□□□ 1.88
SHARPIN-209ENST00000534242 PNMA1Q8ND90 353 aa26.79■■□□□ 1.88
SHARPIN-209ENST00000534242 NKRFO15226 690 aaKnown RBP eCLIP26.78■■□□□ 1.88
SHARPIN-209ENST00000534242 OTOP2Q7RTS6 562 aa26.78■■□□□ 1.88
SHARPIN-209ENST00000534242 RGS22Q8NE09 1264 aa26.78■■□□□ 1.88
SHARPIN-209ENST00000534242 SCFD2Q8WU76 684 aa26.78■■□□□ 1.88
SHARPIN-209ENST00000534242 ANKS1AQ92625 1134 aa26.78■■□□□ 1.88
SHARPIN-209ENST00000534242 YTHDC1Q96MU7 727 aaKnown RBP26.78■■□□□ 1.88
SHARPIN-209ENST00000534242 MTG1Q9BT17 334 aaPredicted RBP26.78■■□□□ 1.88
SHARPIN-209ENST00000534242 GPHNQ9NQX3 736 aaPredicted RBP26.78■■□□□ 1.88
SHARPIN-209ENST00000534242 TRMT13Q9NUP7 481 aaKnown RBP26.78■■□□□ 1.88
SHARPIN-209ENST00000534242 TNKSO95271 1327 aa26.77■■□□□ 1.88
SHARPIN-209ENST00000534242 RAD50Q92878 1312 aa26.77■■□□□ 1.88
SHARPIN-209ENST00000534242 HIP1O00291 1037 aa26.77■■□□□ 1.88
SHARPIN-209ENST00000534242 RAB30Q15771 203 aa26.77■■□□□ 1.88
SHARPIN-209ENST00000534242 CDC37Q16543 378 aaPredicted RBP26.77■■□□□ 1.88
SHARPIN-209ENST00000534242 KAT14Q9H8E8 782 aa26.77■■□□□ 1.88
SHARPIN-209ENST00000534242 MSRAQ9UJ68 235 aa26.77■■□□□ 1.88
SHARPIN-209ENST00000534242 B4DLN1 442 aa26.76■■□□□ 1.87
SHARPIN-209ENST00000534242 B4E1Z4 1266 aa26.76■■□□□ 1.87
SHARPIN-209ENST00000534242 SUPT20HL2P0C7V6 817 aa26.76■■□□□ 1.87
SHARPIN-209ENST00000534242 MRPL12P52815 198 aaKnown RBP26.76■■□□□ 1.87
SHARPIN-209ENST00000534242 BRDTQ58F21 947 aaPredicted RBP26.76■■□□□ 1.87
SHARPIN-209ENST00000534242 RPUSD2Q8IZ73 545 aaKnown RBP26.76■■□□□ 1.87
SHARPIN-209ENST00000534242 USP38Q8NB14 1042 aa26.76■■□□□ 1.87
SHARPIN-209ENST00000534242 EXOC6Q8TAG9 804 aa26.76■■□□□ 1.87
SHARPIN-209ENST00000534242 COPS5Q92905 334 aa26.76■■□□□ 1.87
SHARPIN-209ENST00000534242 SCLYQ96I15 445 aa26.76■■□□□ 1.87
SHARPIN-209ENST00000534242 ZSCAN10Q96SZ4 725 aaPredicted RBP26.76■■□□□ 1.87
SHARPIN-209ENST00000534242 DSCC1Q9BVC3 393 aa26.76■■□□□ 1.87
SHARPIN-209ENST00000534242 LAMA4Q16363 1823 aa26.76■■□□□ 1.87
SHARPIN-209ENST00000534242 A6NJR5 290 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms