RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 PRDM12Q9H4Q4 367 aa21.29■■□□□ 1
UBXN1-216ENST00000533908 TCP11L1Q9NUJ3 509 aa21.29■■□□□ 1
UBXN1-216ENST00000533908 ALDH5A1P51649 535 aaPredicted RBP21.28■■□□□ 1
UBXN1-216ENST00000533908 HAND2P61296 217 aa21.28■■□□□ 1
UBXN1-216ENST00000533908 NMIQ13287 307 aaPredicted RBP21.28■■□□□ 1
UBXN1-216ENST00000533908 DUSP28Q4G0W2 176 aa21.28■■□□□ 1
UBXN1-216ENST00000533908 OTOP2Q7RTS6 562 aa21.28■■□□□ 1
UBXN1-216ENST00000533908 SPTBN5Q9NRC6 3674 aaKnown RBP21.27■■□□□ 1
UBXN1-216ENST00000533908 RBM47A0AV96 593 aaKnown RBP21.27■■□□□ 1
UBXN1-216ENST00000533908 ZEB2O60315 1214 aa21.27■■□□□ 1
UBXN1-216ENST00000533908 PDHBP11177 359 aa21.27■■□□□ 1
UBXN1-216ENST00000533908 ADGRE1Q14246 886 aa21.27■■□□□ 1
UBXN1-216ENST00000533908 SLC30A10Q6XR72 485 aa21.27■■□□□ 1
UBXN1-216ENST00000533908 WDR11Q9BZH6 1224 aa21.27■■□□□ 1
UBXN1-216ENST00000533908 YBX2Q9Y2T7 364 aaKnown RBP21.27■■□□□ 1
UBXN1-216ENST00000533908 PTPDC1A2A3K4 754 aa21.26■□□□□ 0.99
UBXN1-216ENST00000533908 HDAC1Q13547 482 aaPredicted RBP21.26■□□□□ 0.99
UBXN1-216ENST00000533908 PPP1R13LQ8WUF5 828 aa21.26■□□□□ 0.99
UBXN1-216ENST00000533908 SCLYQ96I15 445 aa21.26■□□□□ 0.99
UBXN1-216ENST00000533908 ALDH8A1Q9H2A2 487 aaPredicted RBP21.26■□□□□ 0.99
UBXN1-216ENST00000533908 ADD3Q9UEY8 706 aaKnown RBP21.26■□□□□ 0.99
UBXN1-216ENST00000533908 CALML3P27482 149 aa21.25■□□□□ 0.99
UBXN1-216ENST00000533908 ZNF543Q08ER8 600 aa21.25■□□□□ 0.99
UBXN1-216ENST00000533908 TBC1D10CQ8IV04 446 aa21.25■□□□□ 0.99
UBXN1-216ENST00000533908 PPM1EQ8WY54 764 aa21.25■□□□□ 0.99
UBXN1-216ENST00000533908 TTC28Q96AY4 2481 aa21.25■□□□□ 0.99
UBXN1-216ENST00000533908 SEZ6LQ9BYH1 1024 aa21.25■□□□□ 0.99
UBXN1-216ENST00000533908 NKX2-4Q9H2Z4 354 aa21.25■□□□□ 0.99
UBXN1-216ENST00000533908 TRMT13Q9NUP7 481 aaKnown RBP21.25■□□□□ 0.99
UBXN1-216ENST00000533908 ZBTB47Q9UFB7 747 aaPredicted RBP21.25■□□□□ 0.99
UBXN1-216ENST00000533908 SNHG28P0DPA3 235 aa21.24■□□□□ 0.99
UBXN1-216ENST00000533908 CYP2C9P11712 490 aa21.24■□□□□ 0.99
UBXN1-216ENST00000533908 RABGGTBP53611 331 aa21.24■□□□□ 0.99
UBXN1-216ENST00000533908 PURAQ00577 322 aaKnown RBP21.24■□□□□ 0.99
UBXN1-216ENST00000533908 CPVLQ9H3G5 476 aa21.24■□□□□ 0.99
UBXN1-216ENST00000533908 MSRAQ9UJ68 235 aa21.24■□□□□ 0.99
UBXN1-216ENST00000533908 MYO9BQ13459 2157 aa21.24■□□□□ 0.99
UBXN1-216ENST00000533908 MYL3P08590 195 aa21.23■□□□□ 0.99
UBXN1-216ENST00000533908 MYOGP15173 224 aa21.23■□□□□ 0.99
UBXN1-216ENST00000533908 RPS6P62753 249 aaKnown RBP21.23■□□□□ 0.99
UBXN1-216ENST00000533908 AKNAD1Q5T1N1 836 aa21.23■□□□□ 0.99
UBXN1-216ENST00000533908 RNF207Q6ZRF8 634 aa21.23■□□□□ 0.99
UBXN1-216ENST00000533908 COPS5Q92905 334 aa21.23■□□□□ 0.99
UBXN1-216ENST00000533908 TTC14Q96N46 770 aa21.23■□□□□ 0.99
UBXN1-216ENST00000533908 ZKSCAN3Q9BRR0 538 aa21.23■□□□□ 0.99
UBXN1-216ENST00000533908 LNPKQ9C0E8 428 aa21.23■□□□□ 0.99
UBXN1-216ENST00000533908 GBF1Q92538 1859 aa21.23■□□□□ 0.99
UBXN1-216ENST00000533908 ZMYM6O95789 1325 aa21.23■□□□□ 0.99
UBXN1-216ENST00000533908 LOC102724159A0A0B4J2E5 919 aa21.22■□□□□ 0.99
UBXN1-216ENST00000533908 GOLGA8HP0CJ92 632 aa21.22■□□□□ 0.99
UBXN1-216ENST00000533908 EDNRBP24530 442 aa21.22■□□□□ 0.99
UBXN1-216ENST00000533908 PWP2Q15269 919 aaKnown RBP21.22■□□□□ 0.99
UBXN1-216ENST00000533908 RAB30Q15771 203 aa21.22■□□□□ 0.99
UBXN1-216ENST00000533908 MFSD6Q6ZSS7 791 aa21.22■□□□□ 0.99
UBXN1-216ENST00000533908 TBC1D5Q92609 795 aa21.22■□□□□ 0.99
UBXN1-216ENST00000533908 GAS2L1Q99501 681 aaPredicted RBP21.22■□□□□ 0.99
UBXN1-216ENST00000533908 POLR3EQ9NVU0 708 aa21.22■□□□□ 0.99
UBXN1-216ENST00000533908 CCDC171Q6TFL3 1326 aa21.22■□□□□ 0.99
UBXN1-216ENST00000533908 TTLL4Q14679 1199 aa21.21■□□□□ 0.99
UBXN1-216ENST00000533908 NBPF20Q3BBV1 942 aa21.21■□□□□ 0.99
UBXN1-216ENST00000533908 TJAP1Q5JTD0 557 aa21.21■□□□□ 0.99
UBXN1-216ENST00000533908 TICAM2Q86XR7 235 aa21.21■□□□□ 0.99
UBXN1-216ENST00000533908 OR6J1Q8NGC5 347 aa21.21■□□□□ 0.99
UBXN1-216ENST00000533908 SYMPKQ92797 1274 aaKnown RBP21.21■□□□□ 0.99
UBXN1-216ENST00000533908 UBA5Q9GZZ9 404 aa21.21■□□□□ 0.99
UBXN1-216ENST00000533908 TNKSO95271 1327 aa21.21■□□□□ 0.99
UBXN1-216ENST00000533908 NEDD4P46934 1319 aa21.21■□□□□ 0.99
UBXN1-216ENST00000533908 TRIM6-TRIM34B2RNG4 842 aa21.2■□□□□ 0.98
UBXN1-216ENST00000533908 CCDC85BQ15834 202 aaPredicted RBP21.2■□□□□ 0.98
UBXN1-216ENST00000533908 RPUSD2Q8IZ73 545 aaKnown RBP21.2■□□□□ 0.98
UBXN1-216ENST00000533908 RILPL2Q969X0 211 aa21.2■□□□□ 0.98
UBXN1-216ENST00000533908 MTG1Q9BT17 334 aaPredicted RBP21.2■□□□□ 0.98
UBXN1-216ENST00000533908 MTIF3Q9H2K0 278 aaKnown RBP21.2■□□□□ 0.98
UBXN1-216ENST00000533908 SLC28A3Q9HAS3 691 aa21.2■□□□□ 0.98
UBXN1-216ENST00000533908 SLC4A7Q9Y6M7 1214 aa21.2■□□□□ 0.98
UBXN1-216ENST00000533908 WDR19Q8NEZ3 1342 aa21.2■□□□□ 0.98
UBXN1-216ENST00000533908 A6NJR5 290 aa21.19■□□□□ 0.98
UBXN1-216ENST00000533908 ARIH2O95376 493 aa21.19■□□□□ 0.98
UBXN1-216ENST00000533908 SDSP20132 328 aa21.19■□□□□ 0.98
UBXN1-216ENST00000533908 IGFBP4P22692 258 aa21.19■□□□□ 0.98
UBXN1-216ENST00000533908 CPT1AP50416 773 aa21.19■□□□□ 0.98
UBXN1-216ENST00000533908 PDE4DQ08499 809 aa21.19■□□□□ 0.98
UBXN1-216ENST00000533908 CHD7Q9P2D1 2997 aa21.19■□□□□ 0.98
UBXN1-216ENST00000533908 SUPT20HL2P0C7V6 817 aa21.18■□□□□ 0.98
UBXN1-216ENST00000533908 USH1GQ495M9 461 aa21.18■□□□□ 0.98
UBXN1-216ENST00000533908 B4GALNT3Q6L9W6 998 aa21.18■□□□□ 0.98
UBXN1-216ENST00000533908 DEFB128Q7Z7B8 93 aa21.18■□□□□ 0.98
UBXN1-216ENST00000533908 SMC5Q8IY18 1101 aa21.18■□□□□ 0.98
UBXN1-216ENST00000533908 DNERQ8NFT8 737 aa21.18■□□□□ 0.98
UBXN1-216ENST00000533908 SCN10AQ9Y5Y9 1956 aa21.17■□□□□ 0.98
UBXN1-216ENST00000533908 SCN5AQ14524 2016 aa21.17■□□□□ 0.98
UBXN1-216ENST00000533908 TXNP10599 105 aaKnown RBP21.17■□□□□ 0.98
UBXN1-216ENST00000533908 PCP11498 1178 aaKnown RBP21.17■□□□□ 0.98
UBXN1-216ENST00000533908 PPP2R5BQ15173 497 aa21.17■□□□□ 0.98
UBXN1-216ENST00000533908 FAM47CQ5HY64 1035 aa21.17■□□□□ 0.98
UBXN1-216ENST00000533908 CCDC62Q6P9F0 684 aa21.17■□□□□ 0.98
UBXN1-216ENST00000533908 DGKHQ86XP1 1220 aa21.17■□□□□ 0.98
UBXN1-216ENST00000533908 RGS22Q8NE09 1264 aa21.17■□□□□ 0.98
UBXN1-216ENST00000533908 SCFD2Q8WU76 684 aa21.17■□□□□ 0.98
UBXN1-216ENST00000533908 TAAR1Q96RJ0 339 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms