RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 LUC7L2Q9Y383 392 aaKnown RBP13.4□□□□□ -0.26
ATM-222ENST00000533733 MYH7BA7E2Y1 1941 aa13.4□□□□□ -0.26
ATM-222ENST00000533733 KRT9P35527 623 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 FXR1P51114 621 aaKnown RBP eCLIP13.39□□□□□ -0.27
ATM-222ENST00000533733 ASIC1P78348 528 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 UNC13DQ70J99 1090 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 KRT27Q7Z3Y8 459 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 PODNQ7Z5L7 613 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 EHBP1Q8NDI1 1231 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 GOLGA1Q92805 767 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 CUL5Q93034 780 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 DNAJC7Q99615 494 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 CARD6Q9BX69 1037 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 LRWD1Q9UFC0 647 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 COL11A2P13942 1736 aaPredicted RBP13.39□□□□□ -0.27
ATM-222ENST00000533733 A0A1W2PQJ5 194 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 SRGNP10124 158 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 CDC25AP30304 524 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 KRT83P78385 493 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 CBX1P83916 185 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 KRT79Q5XKE5 535 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 TMCO3Q6UWJ1 677 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 ARHGAP27Q6ZUM4 889 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 IRF2BP1Q8IU81 584 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 CSGALNACT2Q8N6G5 542 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 CPLX3Q8WVH0 158 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 MTMR8Q96EF0 704 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 WDR24Q96S15 920 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 USP40Q9NVE5 1235 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 ZNHIT6Q9NWK9 470 aaKnown RBP13.39□□□□□ -0.27
ATM-222ENST00000533733 CDC23Q9UJX2 597 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 MTMR7Q9Y216 660 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 STK24Q9Y6E0 443 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 KDM3AQ9Y4C1 1321 aa13.39□□□□□ -0.27
ATM-222ENST00000533733 RGPD3A6NKT7 1758 aaPredicted RBP13.38□□□□□ -0.27
ATM-222ENST00000533733 RGPD4Q7Z3J3 1758 aa13.38□□□□□ -0.27
ATM-222ENST00000533733 CTAGE9A4FU28 777 aa13.38□□□□□ -0.27
ATM-222ENST00000533733 PP2D1A8MPX8 630 aa13.38□□□□□ -0.27
ATM-222ENST00000533733 AKR1B1P15121 316 aa13.38□□□□□ -0.27
ATM-222ENST00000533733 CYLC1P35663 651 aaPredicted RBP13.38□□□□□ -0.27
ATM-222ENST00000533733 TECP42680 631 aa13.38□□□□□ -0.27
ATM-222ENST00000533733 CLK2P49760 499 aaKnown RBP13.38□□□□□ -0.27
ATM-222ENST00000533733 CDK17Q00537 523 aa13.38□□□□□ -0.27
ATM-222ENST00000533733 LRRC63Q05C16 580 aa13.38□□□□□ -0.27
ATM-222ENST00000533733 PTPN21Q16825 1174 aa13.38□□□□□ -0.27
ATM-222ENST00000533733 DPP8Q6V1X1 898 aaPredicted RBP13.38□□□□□ -0.27
ATM-222ENST00000533733 RSRC2Q7L4I2 434 aaKnown RBP13.38□□□□□ -0.27
ATM-222ENST00000533733 ZSCAN29Q8IWY8 852 aaPredicted RBP13.38□□□□□ -0.27
ATM-222ENST00000533733 CCDC170Q8IYT3 715 aa13.38□□□□□ -0.27
ATM-222ENST00000533733 GUF1Q8N442 669 aaKnown RBP13.38□□□□□ -0.27
ATM-222ENST00000533733 DCAF4Q8WV16 495 aa13.38□□□□□ -0.27
ATM-222ENST00000533733 LARP4BQ92615 738 aaKnown RBP13.38□□□□□ -0.27
ATM-222ENST00000533733 MKL1Q969V6 931 aa13.38□□□□□ -0.27
ATM-222ENST00000533733 MASTLQ96GX5 879 aa13.38□□□□□ -0.27
ATM-222ENST00000533733 ERGIC2Q96RQ1 377 aa13.38□□□□□ -0.27
ATM-222ENST00000533733 DESI2Q9BSY9 194 aa13.38□□□□□ -0.27
ATM-222ENST00000533733 NT5C3AQ9H0P0 336 aa13.38□□□□□ -0.27
ATM-222ENST00000533733 HAUS4Q9H6D7 363 aa13.38□□□□□ -0.27
ATM-222ENST00000533733 MRPL44Q9H9J2 332 aaKnown RBP13.38□□□□□ -0.27
ATM-222ENST00000533733 VAT1LQ9HCJ6 419 aa13.38□□□□□ -0.27
ATM-222ENST00000533733 BIN2Q9UBW5 565 aaPredicted RBP13.38□□□□□ -0.27
ATM-222ENST00000533733 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.38□□□□□ -0.27
ATM-222ENST00000533733 V9GYY5 206 aaPredicted RBP13.38□□□□□ -0.27
ATM-222ENST00000533733 ZNF646O15015 1829 aaPredicted RBP13.37□□□□□ -0.27
ATM-222ENST00000533733 SIPA1L1O43166 1804 aa13.37□□□□□ -0.27
ATM-222ENST00000533733 G3V3G9 751 aa13.37□□□□□ -0.27
ATM-222ENST00000533733 ZBTB5O15062 677 aa13.37□□□□□ -0.27
ATM-222ENST00000533733 PICALMQ13492 652 aa13.37□□□□□ -0.27
ATM-222ENST00000533733 WHAMMP3Q1A5X7 153 aa13.37□□□□□ -0.27
ATM-222ENST00000533733 FKBP15Q5T1M5 1219 aa13.37□□□□□ -0.27
ATM-222ENST00000533733 DCAF8Q5TAQ9 597 aa13.37□□□□□ -0.27
ATM-222ENST00000533733 CENPPQ6IPU0 288 aa13.37□□□□□ -0.27
ATM-222ENST00000533733 MOXD1Q6UVY6 613 aa13.37□□□□□ -0.27
ATM-222ENST00000533733 SRGAP1Q7Z6B7 1085 aa13.37□□□□□ -0.27
ATM-222ENST00000533733 ZDHHC15Q96MV8 337 aa13.37□□□□□ -0.27
ATM-222ENST00000533733 TUBGCP2Q9BSJ2 902 aa13.37□□□□□ -0.27
ATM-222ENST00000533733 EPN1Q9Y6I3 576 aaPredicted RBP13.37□□□□□ -0.27
ATM-222ENST00000533733 COL2A1P02458 1487 aaPredicted RBP13.37□□□□□ -0.27
ATM-222ENST00000533733 ATAD5Q96QE3 1844 aa13.36□□□□□ -0.27
ATM-222ENST00000533733 SOCS7O14512 581 aa13.36□□□□□ -0.27
ATM-222ENST00000533733 PLSCR1O15162 318 aa13.36□□□□□ -0.27
ATM-222ENST00000533733 IPO7O95373 1038 aaKnown RBP13.36□□□□□ -0.27
ATM-222ENST00000533733 SHMT1P34896 483 aa13.36□□□□□ -0.27
ATM-222ENST00000533733 ZBED6P86452 979 aa13.36□□□□□ -0.27
ATM-222ENST00000533733 MTF1Q14872 753 aa13.36□□□□□ -0.27
ATM-222ENST00000533733 MEA1Q16626 185 aa13.36□□□□□ -0.27
ATM-222ENST00000533733 HYIQ5T013 277 aa13.36□□□□□ -0.27
ATM-222ENST00000533733 PROM2Q8N271 834 aa13.36□□□□□ -0.27
ATM-222ENST00000533733 NAPGQ99747 312 aaPredicted RBP13.36□□□□□ -0.27
ATM-222ENST00000533733 DUSP9Q99956 384 aaKnown RBP13.36□□□□□ -0.27
ATM-222ENST00000533733 MMTAG2Q9BU76 263 aaKnown RBP13.36□□□□□ -0.27
ATM-222ENST00000533733 UBA5Q9GZZ9 404 aa13.36□□□□□ -0.27
ATM-222ENST00000533733 QTRT2Q9H974 415 aaKnown RBP13.36□□□□□ -0.27
ATM-222ENST00000533733 JMJD4Q9H9V9 463 aa13.36□□□□□ -0.27
ATM-222ENST00000533733 NYAP2Q9P242 653 aa13.36□□□□□ -0.27
ATM-222ENST00000533733 SYNPO2Q9UMS6 1093 aa13.36□□□□□ -0.27
ATM-222ENST00000533733 TRIM49BA6NDI0 452 aa13.36□□□□□ -0.27
ATM-222ENST00000533733 FANCGO15287 622 aa13.36□□□□□ -0.27
ATM-222ENST00000533733 KIF20AO95235 890 aa13.36□□□□□ -0.27
ATM-222ENST00000533733 NDUFA10O95299 355 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms