RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 FGBP02675 491 aa10.25□□□□□ -0.77
COPB1-210ENST00000533533 CHMLP26374 656 aa10.25□□□□□ -0.77
COPB1-210ENST00000533533 SLC1A4P43007 532 aa10.25□□□□□ -0.77
COPB1-210ENST00000533533 TFAP4Q01664 338 aa10.25□□□□□ -0.77
COPB1-210ENST00000533533 IKQ13123 557 aaPredicted RBP10.25□□□□□ -0.77
COPB1-210ENST00000533533 ITGA7Q13683 1181 aa10.25□□□□□ -0.77
COPB1-210ENST00000533533 RAB30Q15771 203 aa10.25□□□□□ -0.77
COPB1-210ENST00000533533 FSCN1Q16658 493 aaKnown RBP10.25□□□□□ -0.77
COPB1-210ENST00000533533 TKFCQ3LXA3 575 aa10.25□□□□□ -0.77
COPB1-210ENST00000533533 RRP12Q5JTH9 1297 aaKnown RBP10.25□□□□□ -0.77
COPB1-210ENST00000533533 TLK2Q86UE8 772 aa10.25□□□□□ -0.77
COPB1-210ENST00000533533 FAM160B2Q86V87 743 aa10.25□□□□□ -0.77
COPB1-210ENST00000533533 STAG1Q8WVM7 1258 aa10.25□□□□□ -0.77
COPB1-210ENST00000533533 ATXN2LQ8WWM7 1075 aaKnown RBP10.25□□□□□ -0.77
COPB1-210ENST00000533533 PPM1EQ8WY54 764 aa10.25□□□□□ -0.77
COPB1-210ENST00000533533 TRERF1Q96PN7 1200 aa10.25□□□□□ -0.77
COPB1-210ENST00000533533 MTIF3Q9H2K0 278 aaKnown RBP10.25□□□□□ -0.77
COPB1-210ENST00000533533 HIPK3Q9H422 1215 aa10.25□□□□□ -0.77
COPB1-210ENST00000533533 MSRAQ9UJ68 235 aa10.25□□□□□ -0.77
COPB1-210ENST00000533533 TRIP12Q14669 1992 aaPredicted RBP10.25□□□□□ -0.77
COPB1-210ENST00000533533 TET1Q8NFU7 2136 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 XIRP2A4UGR9 3374 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 FOXP2O15409 715 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 DYNC1LI2O43237 492 aaPredicted RBP10.24□□□□□ -0.77
COPB1-210ENST00000533533 ZEB2O60315 1214 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 RANBP6O60518 1105 aaKnown RBP10.24□□□□□ -0.77
COPB1-210ENST00000533533 ALAS1P13196 640 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 SMPD1P17405 629 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 PTGS1P23219 599 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 MCCP23508 829 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 ADGRE1Q14246 886 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 ALX1Q15699 326 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 PPP4R3BQ5MIZ7 849 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 IQSEC1Q6DN90 963 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 CHMP4CQ96CF2 233 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 SEZ6LQ9BYH1 1024 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 AP5M1Q9H0R1 490 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 INCENPQ9NQS7 918 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 PDGFCQ9NRA1 345 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 Q9Y3F1 56 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 DDX49Q9Y6V7 483 aaKnown RBP10.24□□□□□ -0.77
COPB1-210ENST00000533533 SCN10AQ9Y5Y9 1956 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 GRIN2DO15399 1336 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 UMODL1Q5DID0 1318 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 SCN5AQ14524 2016 aa10.24□□□□□ -0.77
COPB1-210ENST00000533533 TSPY2A6NKD2 308 aa10.23□□□□□ -0.77
COPB1-210ENST00000533533 ZNF213O14771 459 aa10.23□□□□□ -0.77
COPB1-210ENST00000533533 BMP2KLQ5H9B9 411 aa10.23□□□□□ -0.77
COPB1-210ENST00000533533 RCSD1Q6JBY9 416 aa10.23□□□□□ -0.77
COPB1-210ENST00000533533 TAPT1Q6NXT6 567 aa10.23□□□□□ -0.77
COPB1-210ENST00000533533 CASC1Q6TDU7 716 aa10.23□□□□□ -0.77
COPB1-210ENST00000533533 KIAA1211Q6ZU35 1233 aa10.23□□□□□ -0.77
COPB1-210ENST00000533533 KCTD1Q719H9 257 aa10.23□□□□□ -0.77
COPB1-210ENST00000533533 EEPD1Q7L9B9 569 aa10.23□□□□□ -0.77
COPB1-210ENST00000533533 OTOP2Q7RTS6 562 aa10.23□□□□□ -0.77
COPB1-210ENST00000533533 FBXO16Q8IX29 292 aaPredicted RBP10.23□□□□□ -0.77
COPB1-210ENST00000533533 ASB2Q96Q27 587 aa10.23□□□□□ -0.77
COPB1-210ENST00000533533 NOC4LQ9BVI4 516 aaKnown RBP10.23□□□□□ -0.77
COPB1-210ENST00000533533 TRPV6Q9H1D0 765 aa10.23□□□□□ -0.77
COPB1-210ENST00000533533 IL25Q9H293 177 aa10.23□□□□□ -0.77
COPB1-210ENST00000533533 NKX2-4Q9H2Z4 354 aa10.23□□□□□ -0.77
COPB1-210ENST00000533533 SLC28A3Q9HAS3 691 aa10.23□□□□□ -0.77
COPB1-210ENST00000533533 CYP39A1Q9NYL5 469 aa10.23□□□□□ -0.77
COPB1-210ENST00000533533 THEGQ9P2T0 379 aa10.23□□□□□ -0.77
COPB1-210ENST00000533533 PRR12Q9ULL5 1215 aa10.23□□□□□ -0.77
COPB1-210ENST00000533533 STX8Q9UNK0 236 aa10.23□□□□□ -0.77
COPB1-210ENST00000533533 YBX2Q9Y2T7 364 aaKnown RBP10.23□□□□□ -0.77
COPB1-210ENST00000533533 RAD50Q92878 1312 aa10.23□□□□□ -0.77
COPB1-210ENST00000533533 PIEZO1Q92508 2521 aa10.22□□□□□ -0.77
COPB1-210ENST00000533533 B4GALT4O60513 344 aa10.22□□□□□ -0.77
COPB1-210ENST00000533533 IGFBP4P22692 258 aa10.22□□□□□ -0.77
COPB1-210ENST00000533533 CCL23P55773 120 aa10.22□□□□□ -0.77
COPB1-210ENST00000533533 SNAP25P60880 206 aa10.22□□□□□ -0.77
COPB1-210ENST00000533533 MRPS5P82675 430 aaKnown RBP10.22□□□□□ -0.77
COPB1-210ENST00000533533 CCDC85BQ15834 202 aaPredicted RBP10.22□□□□□ -0.77
COPB1-210ENST00000533533 IMMTQ16891 758 aaKnown RBP10.22□□□□□ -0.77
COPB1-210ENST00000533533 MUM1L1Q5H9M0 696 aa10.22□□□□□ -0.77
COPB1-210ENST00000533533 TMEM63BQ5T3F8 832 aa10.22□□□□□ -0.77
COPB1-210ENST00000533533 NSMFQ6X4W1 530 aa10.22□□□□□ -0.77
COPB1-210ENST00000533533 MFSD6Q6ZSS7 791 aa10.22□□□□□ -0.77
COPB1-210ENST00000533533 RPUSD2Q8IZ73 545 aaKnown RBP10.22□□□□□ -0.77
COPB1-210ENST00000533533 MORC4Q8TE76 937 aa10.22□□□□□ -0.77
COPB1-210ENST00000533533 DSCC1Q9BVC3 393 aa10.22□□□□□ -0.77
COPB1-210ENST00000533533 WNT8AQ9H1J5 351 aa10.22□□□□□ -0.77
COPB1-210ENST00000533533 VTA1Q9NP79 307 aa10.22□□□□□ -0.77
COPB1-210ENST00000533533 IL17RBQ9NRM6 502 aa10.22□□□□□ -0.77
COPB1-210ENST00000533533 CTNNA3Q9UI47 895 aa10.22□□□□□ -0.77
COPB1-210ENST00000533533 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.22□□□□□ -0.776e-6■■□□□ 13.9
COPB1-210ENST00000533533 SGSM2O43147 1006 aa10.21□□□□□ -0.77
COPB1-210ENST00000533533 NMT2O60551 498 aa10.21□□□□□ -0.77
COPB1-210ENST00000533533 CDC45O75419 566 aa10.21□□□□□ -0.77
COPB1-210ENST00000533533 ICAM1P05362 532 aa10.21□□□□□ -0.77
COPB1-210ENST00000533533 PRR29P0C7W0 189 aa10.21□□□□□ -0.77
COPB1-210ENST00000533533 RABGGTBP53611 331 aa10.21□□□□□ -0.77
COPB1-210ENST00000533533 PSMC6P62333 389 aa10.21□□□□□ -0.77
COPB1-210ENST00000533533 DUSP28Q4G0W2 176 aa10.21□□□□□ -0.77
COPB1-210ENST00000533533 RASGRP2Q7LDG7 609 aa10.21□□□□□ -0.77
COPB1-210ENST00000533533 ADAMTS19Q8TE59 1207 aa10.21□□□□□ -0.77
COPB1-210ENST00000533533 VWCEQ96DN2 955 aa10.21□□□□□ -0.77
COPB1-210ENST00000533533 PURBQ96QR8 312 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms