RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 CREG2Q8IUH2 290 aa18.52■□□□□ 0.56
CTSB-228ENST00000533455 SMARCC1Q92922 1105 aaPredicted RBP18.52■□□□□ 0.56
CTSB-228ENST00000533455 SH2D4AQ9H788 454 aa18.52■□□□□ 0.56
CTSB-228ENST00000533455 PLAGL2Q9UPG8 496 aa18.52■□□□□ 0.56
CTSB-228ENST00000533455 DUSP10Q9Y6W6 482 aa18.52■□□□□ 0.56
CTSB-228ENST00000533455 CYTH3O43739 400 aa18.52■□□□□ 0.55
CTSB-228ENST00000533455 USO1O60763 962 aaKnown RBP18.52■□□□□ 0.55
CTSB-228ENST00000533455 TACC1O75410 805 aa18.52■□□□□ 0.55
CTSB-228ENST00000533455 KLRK1P26718 216 aa18.52■□□□□ 0.55
CTSB-228ENST00000533455 PRDX5P30044 214 aa18.52■□□□□ 0.55
CTSB-228ENST00000533455 MAGEA9P43362 315 aa18.52■□□□□ 0.55
CTSB-228ENST00000533455 CYP27A1Q02318 531 aa18.52■□□□□ 0.55
CTSB-228ENST00000533455 CELF1Q92879 486 aaKnown RBP18.52■□□□□ 0.55
CTSB-228ENST00000533455 CCDC42Q96M95 316 aa18.52■□□□□ 0.55
CTSB-228ENST00000533455 JADE2Q9NQC1 790 aa18.52■□□□□ 0.55
CTSB-228ENST00000533455 MCM9Q9NXL9 1143 aa18.52■□□□□ 0.55
CTSB-228ENST00000533455 LRWD1Q9UFC0 647 aa18.52■□□□□ 0.55
CTSB-228ENST00000533455 MACROD2A1Z1Q3 448 aa18.51■□□□□ 0.55
CTSB-228ENST00000533455 USP17L8P0C7I0 530 aa18.51■□□□□ 0.55
CTSB-228ENST00000533455 HIBADHP31937 336 aaKnown RBP18.51■□□□□ 0.55
CTSB-228ENST00000533455 CORO7P57737 925 aa18.51■□□□□ 0.55
CTSB-228ENST00000533455 ASIC1P78348 528 aa18.51■□□□□ 0.55
CTSB-228ENST00000533455 TXNRD1Q16881 649 aa18.51■□□□□ 0.55
CTSB-228ENST00000533455 CNNM4Q6P4Q7 775 aa18.51■□□□□ 0.55
CTSB-228ENST00000533455 KRT25Q7Z3Z0 450 aa18.51■□□□□ 0.55
CTSB-228ENST00000533455 HEATR3Q7Z4Q2 680 aa18.51■□□□□ 0.55
CTSB-228ENST00000533455 GSPT2Q8IYD1 628 aaKnown RBP18.51■□□□□ 0.55
CTSB-228ENST00000533455 PCMTD1Q96MG8 357 aaPredicted RBP18.51■□□□□ 0.55
CTSB-228ENST00000533455 RSPH14Q9UHP6 348 aa18.51■□□□□ 0.55
CTSB-228ENST00000533455 ZNF831Q5JPB2 1677 aa18.51■□□□□ 0.55
CTSB-228ENST00000533455 ABCB11O95342 1321 aa18.51■□□□□ 0.55
CTSB-228ENST00000533455 PALM3A6NDB9 673 aaPredicted RBP18.5■□□□□ 0.55
CTSB-228ENST00000533455 ZMYND10O75800 440 aa18.5■□□□□ 0.55
CTSB-228ENST00000533455 AMPD3Q01432 767 aa18.5■□□□□ 0.55
CTSB-228ENST00000533455 RIN2Q8WYP3 895 aaPredicted RBP18.5■□□□□ 0.55
CTSB-228ENST00000533455 LZTS2Q9BRK4 669 aa18.5■□□□□ 0.55
CTSB-228ENST00000533455 ZMYND12Q9H0C1 365 aa18.5■□□□□ 0.55
CTSB-228ENST00000533455 SIK3Q9Y2K2 1263 aa18.5■□□□□ 0.55
CTSB-228ENST00000533455 ORC2Q13416 577 aaPredicted RBP18.5■□□□□ 0.55
CTSB-228ENST00000533455 SLC10A5Q5PT55 438 aa18.5■□□□□ 0.55
CTSB-228ENST00000533455 CENPPQ6IPU0 288 aa18.5■□□□□ 0.55
CTSB-228ENST00000533455 KIAA0895Q8NCT3 520 aa18.5■□□□□ 0.55
CTSB-228ENST00000533455 FAM76AQ8TAV0 307 aa18.5■□□□□ 0.55
CTSB-228ENST00000533455 CDCA7Q9BWT1 371 aaPredicted RBP18.5■□□□□ 0.55
CTSB-228ENST00000533455 EFCC1Q9HA90 598 aa18.5■□□□□ 0.55
CTSB-228ENST00000533455 ARHGAP20Q9P2F6 1191 aa18.5■□□□□ 0.55
CTSB-228ENST00000533455 PCDHA13Q9Y5I0 950 aa18.5■□□□□ 0.55
CTSB-228ENST00000533455 CAPN6Q9Y6Q1 641 aa18.5■□□□□ 0.55
CTSB-228ENST00000533455 MYH10P35580 1976 aa18.5■□□□□ 0.55
CTSB-228ENST00000533455 GOLGA6BA6NDN3 693 aa18.49■□□□□ 0.55
CTSB-228ENST00000533455 FCER1AP12319 257 aa18.49■□□□□ 0.55
CTSB-228ENST00000533455 CCDC96Q2M329 555 aa18.49■□□□□ 0.55
CTSB-228ENST00000533455 IFIH1Q9BYX4 1025 aaKnown RBP18.49■□□□□ 0.55
CTSB-228ENST00000533455 SEMA6BQ9H3T3 888 aa18.49■□□□□ 0.55
CTSB-228ENST00000533455 TCP1P17987 556 aaKnown RBP18.49■□□□□ 0.55
CTSB-228ENST00000533455 NONOQ15233 471 aaKnown RBP eCLIP18.49■□□□□ 0.552e-11■■■■■ 33.7
CTSB-228ENST00000533455 VWA3BQ502W6 1294 aa18.49■□□□□ 0.55
CTSB-228ENST00000533455 KRT26Q7Z3Y9 468 aa18.49■□□□□ 0.55
CTSB-228ENST00000533455 SPZ1Q9BXG8 430 aa18.49■□□□□ 0.55
CTSB-228ENST00000533455 ANKRD2Q9GZV1 360 aa18.49■□□□□ 0.55
CTSB-228ENST00000533455 HYOU1Q9Y4L1 999 aa18.49■□□□□ 0.55
CTSB-228ENST00000533455 VGLL3A8MV65 326 aa18.48■□□□□ 0.55
CTSB-228ENST00000533455 PJA2O43164 708 aa18.48■□□□□ 0.55
CTSB-228ENST00000533455 PLEKP08567 350 aaPredicted RBP18.48■□□□□ 0.55
CTSB-228ENST00000533455 TNFRSF8P28908 595 aa18.48■□□□□ 0.55
CTSB-228ENST00000533455 HOXA7P31268 230 aaPredicted RBP18.48■□□□□ 0.55
CTSB-228ENST00000533455 KIF11P52732 1056 aa18.48■□□□□ 0.55
CTSB-228ENST00000533455 SPTY2D1Q68D10 685 aaPredicted RBP18.48■□□□□ 0.55
CTSB-228ENST00000533455 GDAP1L1Q96MZ0 367 aa18.48■□□□□ 0.55
CTSB-228ENST00000533455 SH3GL2Q99962 352 aa18.48■□□□□ 0.55
CTSB-228ENST00000533455 MMTAG2Q9BU76 263 aaKnown RBP18.48■□□□□ 0.55
CTSB-228ENST00000533455 COL24A1Q17RW2 1714 aa18.48■□□□□ 0.55
CTSB-228ENST00000533455 SBF2Q86WG5 1849 aa18.47■□□□□ 0.55
CTSB-228ENST00000533455 GOLGA6CA6NDK9 693 aa18.47■□□□□ 0.55
CTSB-228ENST00000533455 RGL2O15211 777 aa18.47■□□□□ 0.55
CTSB-228ENST00000533455 GOLGA6DP0CG33 693 aa18.47■□□□□ 0.55
CTSB-228ENST00000533455 SF3B2Q13435 895 aaKnown RBP18.47■□□□□ 0.55
CTSB-228ENST00000533455 MAN2A1Q16706 1144 aa18.47■□□□□ 0.55
CTSB-228ENST00000533455 SPATA4Q8NEY3 305 aa18.47■□□□□ 0.55
CTSB-228ENST00000533455 SMCR8Q8TEV9 937 aaPredicted RBP18.47■□□□□ 0.55
CTSB-228ENST00000533455 GOLGA6AQ9NYA3 693 aa18.47■□□□□ 0.55
CTSB-228ENST00000533455 NKRFO15226 690 aaKnown RBP eCLIP18.47■□□□□ 0.552e-7■■□□□ 14
CTSB-228ENST00000533455 NEK8Q86SG6 692 aa18.47■□□□□ 0.55
CTSB-228ENST00000533455 CCDC155Q8N6L0 562 aa18.47■□□□□ 0.55
CTSB-228ENST00000533455 DYNLL2Q96FJ2 89 aa18.47■□□□□ 0.55
CTSB-228ENST00000533455 EEF2KMTQ96G04 330 aa18.47■□□□□ 0.55
CTSB-228ENST00000533455 ZFP91Q96JP5 570 aaPredicted RBP18.47■□□□□ 0.55
CTSB-228ENST00000533455 ALS2CR12Q96Q35 445 aa18.47■□□□□ 0.55
CTSB-228ENST00000533455 OSBPL9Q96SU4 736 aa18.47■□□□□ 0.55
CTSB-228ENST00000533455 NDST4Q9H3R1 872 aa18.47■□□□□ 0.55
CTSB-228ENST00000533455 MLXIPQ9HAP2 919 aa18.47■□□□□ 0.55
CTSB-228ENST00000533455 TFCP2L1Q9NZI6 479 aa18.47■□□□□ 0.55
CTSB-228ENST00000533455 CDK5RAP2Q96SN8 1893 aa18.47■□□□□ 0.55
CTSB-228ENST00000533455 IRS2Q9Y4H2 1338 aa18.46■□□□□ 0.55
CTSB-228ENST00000533455 PVALEFA0A1B0GWK0 134 aa18.46■□□□□ 0.55
CTSB-228ENST00000533455 USP17L3A6NCW0 530 aa18.46■□□□□ 0.55
CTSB-228ENST00000533455 USP17L4A6NCW7 530 aa18.46■□□□□ 0.55
CTSB-228ENST00000533455 GOLGA8KD6RF30 607 aa18.46■□□□□ 0.55
CTSB-228ENST00000533455 MOCS3O95396 460 aa18.46■□□□□ 0.55
CTSB-228ENST00000533455 TSPY3P0CV98 308 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms