RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 ZSWIM5Q9P217 1185 aa13.26□□□□□ -0.29
CLCF1-202ENST00000533438 CTNNA3Q9UI47 895 aa13.26□□□□□ -0.29
CLCF1-202ENST00000533438 PNMA2Q9UL42 364 aa13.26□□□□□ -0.29
CLCF1-202ENST00000533438 CDH23Q9H251 3354 aa13.25□□□□□ -0.29
CLCF1-202ENST00000533438 TNKSO95271 1327 aa13.25□□□□□ -0.29
CLCF1-202ENST00000533438 RAD50Q92878 1312 aa13.25□□□□□ -0.29
CLCF1-202ENST00000533438 TMEM265A0A087WTH1 108 aa13.25□□□□□ -0.29
CLCF1-202ENST00000533438 A0A0U1RQG5 324 aaPredicted RBP13.25□□□□□ -0.29
CLCF1-202ENST00000533438 PTPDC1A2A3K4 754 aa13.25□□□□□ -0.29
CLCF1-202ENST00000533438 DCDC2CA8MYV0 355 aa13.25□□□□□ -0.29
CLCF1-202ENST00000533438 GOLGA8HP0CJ92 632 aa13.25□□□□□ -0.29
CLCF1-202ENST00000533438 RAG1P15918 1043 aa13.25□□□□□ -0.29
CLCF1-202ENST00000533438 PTGS1P23219 599 aa13.25□□□□□ -0.29
CLCF1-202ENST00000533438 BEX3Q00994 111 aa13.25□□□□□ -0.29
CLCF1-202ENST00000533438 TMEM63BQ5T3F8 832 aa13.25□□□□□ -0.29
CLCF1-202ENST00000533438 IQSEC1Q6DN90 963 aa13.25□□□□□ -0.29
CLCF1-202ENST00000533438 SLC30A10Q6XR72 485 aa13.25□□□□□ -0.29
CLCF1-202ENST00000533438 ENAHQ8N8S7 591 aaPredicted RBP13.25□□□□□ -0.29
CLCF1-202ENST00000533438 KAT14Q9H8E8 782 aa13.25□□□□□ -0.29
CLCF1-202ENST00000533438 ADD3Q9UEY8 706 aaKnown RBP13.25□□□□□ -0.29
CLCF1-202ENST00000533438 TBX21Q9UL17 535 aa13.25□□□□□ -0.29
CLCF1-202ENST00000533438 Q9Y3F1 56 aa13.25□□□□□ -0.29
CLCF1-202ENST00000533438 RBM47A0AV96 593 aaKnown RBP13.24□□□□□ -0.29
CLCF1-202ENST00000533438 ARVCFO00192 962 aa13.24□□□□□ -0.29
CLCF1-202ENST00000533438 EPHB4P54760 987 aa13.24□□□□□ -0.29
CLCF1-202ENST00000533438 FAM126BQ8IXS8 530 aa13.24□□□□□ -0.29
CLCF1-202ENST00000533438 SLC43A3Q8NBI5 491 aa13.24□□□□□ -0.29
CLCF1-202ENST00000533438 KRT23Q9C075 422 aa13.24□□□□□ -0.29
CLCF1-202ENST00000533438 UBA5Q9GZZ9 404 aa13.24□□□□□ -0.29
CLCF1-202ENST00000533438 TTYH1Q9H313 450 aaPredicted RBP13.24□□□□□ -0.29
CLCF1-202ENST00000533438 CPVLQ9H3G5 476 aa13.24□□□□□ -0.29
CLCF1-202ENST00000533438 CNNM2Q9H8M5 875 aa13.24□□□□□ -0.29
CLCF1-202ENST00000533438 KIAA1217Q5T5P2 1943 aa13.23□□□□□ -0.29
CLCF1-202ENST00000533438 DYNC1LI2O43237 492 aaPredicted RBP13.23□□□□□ -0.29
CLCF1-202ENST00000533438 TIMP1P01033 207 aa13.23□□□□□ -0.29
CLCF1-202ENST00000533438 CD4P01730 458 aa13.23□□□□□ -0.29
CLCF1-202ENST00000533438 EDNRBP24530 442 aa13.23□□□□□ -0.29
CLCF1-202ENST00000533438 CALML3P27482 149 aa13.23□□□□□ -0.29
CLCF1-202ENST00000533438 RPS6P62753 249 aaKnown RBP13.23□□□□□ -0.29
CLCF1-202ENST00000533438 FPGSQ05932 587 aa13.23□□□□□ -0.29
CLCF1-202ENST00000533438 FSCN1Q16658 493 aaKnown RBP13.23□□□□□ -0.29
CLCF1-202ENST00000533438 DUSP28Q4G0W2 176 aa13.23□□□□□ -0.29
CLCF1-202ENST00000533438 ASPRV1Q53RT3 343 aa13.23□□□□□ -0.29
CLCF1-202ENST00000533438 RNF207Q6ZRF8 634 aa13.23□□□□□ -0.29
CLCF1-202ENST00000533438 KIAA1211Q6ZU35 1233 aa13.23□□□□□ -0.29
CLCF1-202ENST00000533438 NOL8Q76FK4 1167 aaKnown RBP13.23□□□□□ -0.29
CLCF1-202ENST00000533438 ADGRF4Q8IZF3 695 aa13.23□□□□□ -0.29
CLCF1-202ENST00000533438 DNERQ8NFT8 737 aa13.23□□□□□ -0.29
CLCF1-202ENST00000533438 VTI1AQ96AJ9 217 aa13.23□□□□□ -0.29
CLCF1-202ENST00000533438 MAF1Q9H063 256 aa13.23□□□□□ -0.29
CLCF1-202ENST00000533438 AP5M1Q9H0R1 490 aa13.23□□□□□ -0.29
CLCF1-202ENST00000533438 GRIN2DO15399 1336 aa13.22□□□□□ -0.29
CLCF1-202ENST00000533438 CABYRO75952 493 aa13.22□□□□□ -0.29
CLCF1-202ENST00000533438 CHMLP26374 656 aa13.22□□□□□ -0.29
CLCF1-202ENST00000533438 SEC23AQ15436 765 aa13.22□□□□□ -0.29
CLCF1-202ENST00000533438 CDC37Q16543 378 aaPredicted RBP13.22□□□□□ -0.29
CLCF1-202ENST00000533438 USH1GQ495M9 461 aa13.22□□□□□ -0.29
CLCF1-202ENST00000533438 MFSD5Q6N075 450 aa13.22□□□□□ -0.29
CLCF1-202ENST00000533438 CXCL17Q6UXB2 119 aa13.22□□□□□ -0.29
CLCF1-202ENST00000533438 RGS22Q8NE09 1264 aa13.22□□□□□ -0.29
CLCF1-202ENST00000533438 PRDM6Q9NQX0 595 aa13.22□□□□□ -0.29
CLCF1-202ENST00000533438 ABCB11O95342 1321 aa13.21□□□□□ -0.29
CLCF1-202ENST00000533438 TLR3O15455 904 aaKnown RBP13.21□□□□□ -0.29
CLCF1-202ENST00000533438 ZEB2O60315 1214 aa13.21□□□□□ -0.29
CLCF1-202ENST00000533438 CYP21A2P08686 494 aa13.21□□□□□ -0.29
CLCF1-202ENST00000533438 PARP1P09874 1014 aaKnown RBP13.21□□□□□ -0.29
CLCF1-202ENST00000533438 PTH1RQ03431 593 aa13.21□□□□□ -0.29
CLCF1-202ENST00000533438 ITGA7Q13683 1181 aa13.21□□□□□ -0.29
CLCF1-202ENST00000533438 CYB5R4Q7L1T6 521 aa13.21□□□□□ -0.29
CLCF1-202ENST00000533438 MAFAQ8NHW3 353 aaPredicted RBP13.21□□□□□ -0.29
CLCF1-202ENST00000533438 RUFY2Q8WXA3 655 aa13.21□□□□□ -0.29
CLCF1-202ENST00000533438 FAM161BQ96MY7 647 aa13.21□□□□□ -0.29
CLCF1-202ENST00000533438 UBAC1Q9BSL1 405 aa13.21□□□□□ -0.29
CLCF1-202ENST00000533438 SEZ6LQ9BYH1 1024 aa13.21□□□□□ -0.29
CLCF1-202ENST00000533438 WDR11Q9BZH6 1224 aa13.21□□□□□ -0.29
CLCF1-202ENST00000533438 SCN10AQ9Y5Y9 1956 aa13.21□□□□□ -0.29
CLCF1-202ENST00000533438 CHD9Q3L8U1 2897 aa13.21□□□□□ -0.3
CLCF1-202ENST00000533438 QRICH1Q2TAL8 776 aa13.2□□□□□ -0.3
CLCF1-202ENST00000533438 IFIT1BQ5T764 474 aaKnown RBP13.2□□□□□ -0.3
CLCF1-202ENST00000533438 STAG2Q8N3U4 1231 aa13.2□□□□□ -0.3
CLCF1-202ENST00000533438 TBC1D5Q92609 795 aa13.2□□□□□ -0.3
CLCF1-202ENST00000533438 SYMPKQ92797 1274 aaKnown RBP13.2□□□□□ -0.3
CLCF1-202ENST00000533438 RNPC3Q96LT9 517 aaKnown RBP13.2□□□□□ -0.3
CLCF1-202ENST00000533438 MPHOSPH6Q99547 160 aaKnown RBP13.2□□□□□ -0.3
CLCF1-202ENST00000533438 JMJD4Q9H9V9 463 aa13.2□□□□□ -0.3
CLCF1-202ENST00000533438 NKRFO15226 690 aaKnown RBP eCLIP13.19□□□□□ -0.32e-7■■■■■ 28.4
CLCF1-202ENST00000533438 SGSM2O43147 1006 aa13.19□□□□□ -0.3
CLCF1-202ENST00000533438 B4GALT4O60513 344 aa13.19□□□□□ -0.3
CLCF1-202ENST00000533438 PSMC6P62333 389 aa13.19□□□□□ -0.3
CLCF1-202ENST00000533438 PDE4DQ08499 809 aa13.19□□□□□ -0.3
CLCF1-202ENST00000533438 C16orf59Q7L2K0 433 aa13.19□□□□□ -0.3
CLCF1-202ENST00000533438 MTMR8Q96EF0 704 aa13.19□□□□□ -0.3
CLCF1-202ENST00000533438 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.19□□□□□ -0.3
CLCF1-202ENST00000533438 COL20A1Q9P218 1284 aa13.19□□□□□ -0.3
CLCF1-202ENST00000533438 MAD2L2Q9UI95 211 aa13.19□□□□□ -0.3
CLCF1-202ENST00000533438 U3KPZ7 1027 aaPredicted RBP13.19□□□□□ -0.3
CLCF1-202ENST00000533438 B4DLN1 442 aa13.18□□□□□ -0.3
CLCF1-202ENST00000533438 CSF2RAP15509 400 aa13.18□□□□□ -0.3
CLCF1-202ENST00000533438 CPT1AP50416 773 aa13.18□□□□□ -0.3
CLCF1-202ENST00000533438 MRPL12P52815 198 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms