RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 CUL5Q93034 780 aa21.1■□□□□ 0.97
SMPD1-208ENST00000533123 TNFRSF25Q93038 417 aa21.1■□□□□ 0.97
SMPD1-208ENST00000533123 NUP62CLQ9H1M0 184 aa21.1■□□□□ 0.97
SMPD1-208ENST00000533123 HOMER2Q9NSB8 354 aa21.1■□□□□ 0.97
SMPD1-208ENST00000533123 BIN2Q9UBW5 565 aaPredicted RBP21.1■□□□□ 0.97
SMPD1-208ENST00000533123 PCDHA6Q9UN73 950 aa21.1■□□□□ 0.97
SMPD1-208ENST00000533123 PCDHA8Q9Y5H6 950 aa21.1■□□□□ 0.97
SMPD1-208ENST00000533123 FAM155AB1AL88 458 aaPredicted RBP21.09■□□□□ 0.97
SMPD1-208ENST00000533123 OPLAHO14841 1288 aa21.09■□□□□ 0.97
SMPD1-208ENST00000533123 ALAS1P13196 640 aa21.09■□□□□ 0.97
SMPD1-208ENST00000533123 PLS1Q14651 629 aa21.09■□□□□ 0.97
SMPD1-208ENST00000533123 SLC39A14Q15043 492 aa21.09■□□□□ 0.97
SMPD1-208ENST00000533123 UBE2SQ16763 222 aa21.09■□□□□ 0.97
SMPD1-208ENST00000533123 TSPY26PQ9H489 355 aa21.09■□□□□ 0.97
SMPD1-208ENST00000533123 RIPK3Q9Y572 518 aa21.09■□□□□ 0.97
SMPD1-208ENST00000533123 MRPL12P52815 198 aaKnown RBP21.09■□□□□ 0.97
SMPD1-208ENST00000533123 USP17L6PQ6QN14 398 aa21.09■□□□□ 0.97
SMPD1-208ENST00000533123 LBX2Q6XYB7 198 aa21.09■□□□□ 0.97
SMPD1-208ENST00000533123 REXO1Q8N1G1 1221 aaKnown RBP21.09■□□□□ 0.97
SMPD1-208ENST00000533123 FSIP1Q8NA03 581 aa21.09■□□□□ 0.97
SMPD1-208ENST00000533123 CCDC102AQ96A19 550 aa21.09■□□□□ 0.97
SMPD1-208ENST00000533123 TMEM260Q9NX78 707 aa21.09■□□□□ 0.97
SMPD1-208ENST00000533123 JAKMIP3Q5VZ66 844 aa21.08■□□□□ 0.97
SMPD1-208ENST00000533123 ADALQ6DHV7 355 aa21.08■□□□□ 0.97
SMPD1-208ENST00000533123 SNRNP48Q6IEG0 339 aaKnown RBP21.08■□□□□ 0.97
SMPD1-208ENST00000533123 PIK3AP1Q6ZUJ8 805 aa21.08■□□□□ 0.97
SMPD1-208ENST00000533123 ANKRD23Q86SG2 305 aa21.08■□□□□ 0.97
SMPD1-208ENST00000533123 HHIPL1Q96JK4 782 aa21.08■□□□□ 0.97
SMPD1-208ENST00000533123 DDX19AQ9NUU7 478 aaKnown RBP21.08■□□□□ 0.97
SMPD1-208ENST00000533123 BTBD7Q9P203 1132 aa21.08■□□□□ 0.97
SMPD1-208ENST00000533123 MRPL11Q9Y3B7 192 aaKnown RBP21.08■□□□□ 0.97
SMPD1-208ENST00000533123 ABCB11O95342 1321 aa21.08■□□□□ 0.97
SMPD1-208ENST00000533123 LETM1O95202 739 aaPredicted RBP21.08■□□□□ 0.96
SMPD1-208ENST00000533123 APLP1P51693 650 aa21.08■□□□□ 0.96
SMPD1-208ENST00000533123 CYP4F22Q6NT55 531 aa21.08■□□□□ 0.96
SMPD1-208ENST00000533123 TBC1D5Q92609 795 aa21.08■□□□□ 0.96
SMPD1-208ENST00000533123 PAGR1Q9BTK6 254 aa21.08■□□□□ 0.96
SMPD1-208ENST00000533123 MEIS2O14770 477 aa21.07■□□□□ 0.96
SMPD1-208ENST00000533123 OAZ1P54368 228 aa21.07■□□□□ 0.96
SMPD1-208ENST00000533123 SNW1Q13573 536 aaKnown RBP21.07■□□□□ 0.96
SMPD1-208ENST00000533123 AXDND1Q5T1B0 1012 aaPredicted RBP21.07■□□□□ 0.96
SMPD1-208ENST00000533123 RNF214Q8ND24 703 aa21.07■□□□□ 0.96
SMPD1-208ENST00000533123 TNMDQ9H2S6 317 aa21.07■□□□□ 0.96
SMPD1-208ENST00000533123 CLSTN2Q9H4D0 955 aa21.07■□□□□ 0.96
SMPD1-208ENST00000533123 PNMA3Q9UL41 463 aa21.07■□□□□ 0.96
SMPD1-208ENST00000533123 TESPA1A2RU30 521 aaPredicted RBP21.06■□□□□ 0.96
SMPD1-208ENST00000533123 MANSC4A6NHS7 340 aaPredicted RBP21.06■□□□□ 0.96
SMPD1-208ENST00000533123 ATP2B1P20020 1258 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 STAT3P40763 770 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 MUM1L1Q5H9M0 696 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 CCDC73Q6ZRK6 1079 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 MRPS27Q92552 414 aaKnown RBP21.06■□□□□ 0.96
SMPD1-208ENST00000533123 TEX13BQ9BXU2 312 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 SLC45A1Q9Y2W3 748 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 PCDHB6Q9Y5E3 794 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 A0A1B0GVL5 298 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 A0A1W2PQ27 194 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 A0A1W2PQ64 194 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 A0A1W2PQD8 194 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 NFIBO00712 420 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 ATP2A1O14983 1001 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 CFBP00751 764 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 HOXA13P31271 388 aaPredicted RBP21.06■□□□□ 0.96
SMPD1-208ENST00000533123 RILPL1Q5EBL4 403 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 CKAP2LQ8IYA6 745 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 MB21D1Q8N884 522 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 SMCR8Q8TEV9 937 aaPredicted RBP21.06■□□□□ 0.96
SMPD1-208ENST00000533123 CLEC4DQ8WXI8 215 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 TRERF1Q96PN7 1200 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 ZIC5Q96T25 663 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 FUCA2Q9BTY2 467 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 TXNRD2Q9NNW7 524 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 CREBZFQ9NS37 354 aa21.06■□□□□ 0.96
SMPD1-208ENST00000533123 CCDC194A0A1B0GVG4 234 aa21.05■□□□□ 0.96
SMPD1-208ENST00000533123 CLK2P49760 499 aaKnown RBP21.05■□□□□ 0.96
SMPD1-208ENST00000533123 ENGASEQ8NFI3 743 aa21.05■□□□□ 0.96
SMPD1-208ENST00000533123 GLT8D2Q9H1C3 349 aa21.05■□□□□ 0.96
SMPD1-208ENST00000533123 RBPJLQ9UBG7 517 aa21.05■□□□□ 0.96
SMPD1-208ENST00000533123 IGF2BP3O00425 579 aaKnown RBP eCLIP21.05■□□□□ 0.96
SMPD1-208ENST00000533123 FAM160A1Q05DH4 1040 aa21.05■□□□□ 0.96
SMPD1-208ENST00000533123 PNMA2Q9UL42 364 aa21.05■□□□□ 0.96
SMPD1-208ENST00000533123 CNMDO75829 334 aa21.04■□□□□ 0.96
SMPD1-208ENST00000533123 NDUFA8P51970 172 aa21.04■□□□□ 0.96
SMPD1-208ENST00000533123 DEFB115Q30KQ5 88 aa21.04■□□□□ 0.96
SMPD1-208ENST00000533123 RNF146Q9NTX7 359 aa21.04■□□□□ 0.96
SMPD1-208ENST00000533123 WNT7AO00755 349 aa21.04■□□□□ 0.96
SMPD1-208ENST00000533123 PPP6R2O75170 966 aa21.04■□□□□ 0.96
SMPD1-208ENST00000533123 CLIC6Q96NY7 704 aa21.04■□□□□ 0.96
SMPD1-208ENST00000533123 SPATC1LQ9H0A9 340 aa21.04■□□□□ 0.96
SMPD1-208ENST00000533123 A0A0G2JMZ2 1700 aa21.03■□□□□ 0.96
SMPD1-208ENST00000533123 INF2Q27J81 1249 aa21.03■□□□□ 0.96
SMPD1-208ENST00000533123 Q3C1V9 767 aa21.03■□□□□ 0.96
SMPD1-208ENST00000533123 KRT25Q7Z3Z0 450 aa21.03■□□□□ 0.96
SMPD1-208ENST00000533123 FMR1NBQ8N0W7 255 aaPredicted RBP21.03■□□□□ 0.96
SMPD1-208ENST00000533123 GCOM1H8Y6P7 765 aaPredicted RBP21.02■□□□□ 0.96
SMPD1-208ENST00000533123 POLR2MP0CAP2 368 aa21.02■□□□□ 0.96
SMPD1-208ENST00000533123 RABGAP1Q9Y3P9 1069 aa21.02■□□□□ 0.96
SMPD1-208ENST00000533123 MRVI1Q9Y6F6 885 aa21.02■□□□□ 0.96
SMPD1-208ENST00000533123 RASSF10A6NK89 507 aa21.02■□□□□ 0.96
SMPD1-208ENST00000533123 PIK3CDO00329 1044 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms