RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 NKX3-2P78367 333 aa17.91■□□□□ 0.46
DEPDC7-204ENST00000532078 NMIQ13287 307 aaPredicted RBP17.91■□□□□ 0.46
DEPDC7-204ENST00000532078 MUM1L1Q5H9M0 696 aa17.91■□□□□ 0.46
DEPDC7-204ENST00000532078 NSMFQ6X4W1 530 aa17.91■□□□□ 0.46
DEPDC7-204ENST00000532078 LNPKQ9C0E8 428 aa17.91■□□□□ 0.46
DEPDC7-204ENST00000532078 RANBP17Q9H2T7 1088 aaKnown RBP17.91■□□□□ 0.46
DEPDC7-204ENST00000532078 TCP11L1Q9NUJ3 509 aa17.91■□□□□ 0.46
DEPDC7-204ENST00000532078 TBX21Q9UL17 535 aa17.91■□□□□ 0.46
DEPDC7-204ENST00000532078 ARVCFO00192 962 aa17.9■□□□□ 0.46
DEPDC7-204ENST00000532078 TIMP1P01033 207 aa17.9■□□□□ 0.46
DEPDC7-204ENST00000532078 CDK7P50613 346 aa17.9■□□□□ 0.46
DEPDC7-204ENST00000532078 EPHB4P54760 987 aa17.9■□□□□ 0.46
DEPDC7-204ENST00000532078 SYDE2Q5VT97 1194 aa17.9■□□□□ 0.46
DEPDC7-204ENST00000532078 BTNL9Q6UXG8 535 aa17.9■□□□□ 0.46
DEPDC7-204ENST00000532078 TLK2Q86UE8 772 aa17.9■□□□□ 0.46
DEPDC7-204ENST00000532078 ZNF589Q86UQ0 364 aaPredicted RBP17.9■□□□□ 0.46
DEPDC7-204ENST00000532078 TMEM47Q9BQJ4 181 aa17.9■□□□□ 0.46
DEPDC7-204ENST00000532078 ASTN1O14525 1302 aa17.9■□□□□ 0.46
DEPDC7-204ENST00000532078 LCTP09848 1927 aa17.9■□□□□ 0.46
DEPDC7-204ENST00000532078 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.89■□□□□ 0.45
DEPDC7-204ENST00000532078 CTAGE5O15320 804 aa17.89■□□□□ 0.45
DEPDC7-204ENST00000532078 TLR3O15455 904 aaKnown RBP17.89■□□□□ 0.45
DEPDC7-204ENST00000532078 PDE4AP27815 886 aa17.89■□□□□ 0.45
DEPDC7-204ENST00000532078 LCE2DQ5TA82 110 aaPredicted RBP17.89■□□□□ 0.45
DEPDC7-204ENST00000532078 SMC5Q8IY18 1101 aa17.89■□□□□ 0.45
DEPDC7-204ENST00000532078 ZNF710Q8N1W2 664 aa17.89■□□□□ 0.45
DEPDC7-204ENST00000532078 RILPL2Q969X0 211 aa17.89■□□□□ 0.45
DEPDC7-204ENST00000532078 AP5M1Q9H0R1 490 aa17.89■□□□□ 0.45
DEPDC7-204ENST00000532078 RWDD1Q9H446 243 aaPredicted RBP17.89■□□□□ 0.45
DEPDC7-204ENST00000532078 VTA1Q9NP79 307 aa17.89■□□□□ 0.45
DEPDC7-204ENST00000532078 PNMA2Q9UL42 364 aa17.89■□□□□ 0.45
DEPDC7-204ENST00000532078 TMEM265A0A087WTH1 108 aa17.88■□□□□ 0.45
DEPDC7-204ENST00000532078 CABYRO75952 493 aa17.88■□□□□ 0.45
DEPDC7-204ENST00000532078 SLC16A2P36021 539 aa17.88■□□□□ 0.45
DEPDC7-204ENST00000532078 HAND2P61296 217 aa17.88■□□□□ 0.45
DEPDC7-204ENST00000532078 FOXK1P85037 733 aa17.88■□□□□ 0.45
DEPDC7-204ENST00000532078 BEX3Q00994 111 aa17.88■□□□□ 0.45
DEPDC7-204ENST00000532078 PPIGQ13427 754 aaKnown RBP eCLIP17.88■□□□□ 0.45
DEPDC7-204ENST00000532078 FSCN1Q16658 493 aaKnown RBP17.88■□□□□ 0.45
DEPDC7-204ENST00000532078 AKNAD1Q5T1N1 836 aa17.88■□□□□ 0.45
DEPDC7-204ENST00000532078 TTBK2Q6IQ55 1244 aa17.88■□□□□ 0.45
DEPDC7-204ENST00000532078 MFSD5Q6N075 450 aa17.88■□□□□ 0.45
DEPDC7-204ENST00000532078 MFSD6Q6ZSS7 791 aa17.88■□□□□ 0.45
DEPDC7-204ENST00000532078 FBXO16Q8IX29 292 aaPredicted RBP17.88■□□□□ 0.45
DEPDC7-204ENST00000532078 SEMA6BQ9H3T3 888 aa17.88■□□□□ 0.45
DEPDC7-204ENST00000532078 RNF41Q9H4P4 317 aaPredicted RBP17.88■□□□□ 0.45
DEPDC7-204ENST00000532078 GPCPD1Q9NPB8 672 aa17.88■□□□□ 0.45
DEPDC7-204ENST00000532078 ADD3Q9UEY8 706 aaKnown RBP17.88■□□□□ 0.45
DEPDC7-204ENST00000532078 GNEQ9Y223 722 aaKnown RBP17.88■□□□□ 0.45
DEPDC7-204ENST00000532078 FRMPD2Q68DX3 1309 aaPredicted RBP17.88■□□□□ 0.45
DEPDC7-204ENST00000532078 LAMA4Q16363 1823 aa17.88■□□□□ 0.45
DEPDC7-204ENST00000532078 LOC102724159A0A0B4J2E5 919 aa17.87■□□□□ 0.45
DEPDC7-204ENST00000532078 ZEB2O60315 1214 aa17.87■□□□□ 0.45
DEPDC7-204ENST00000532078 PWP2Q15269 919 aaKnown RBP17.87■□□□□ 0.45
DEPDC7-204ENST00000532078 IQSEC1Q6DN90 963 aa17.87■□□□□ 0.45
DEPDC7-204ENST00000532078 TBC1D10CQ8IV04 446 aa17.87■□□□□ 0.45
DEPDC7-204ENST00000532078 FAM126BQ8IXS8 530 aa17.87■□□□□ 0.45
DEPDC7-204ENST00000532078 MORC4Q8TE76 937 aa17.87■□□□□ 0.45
DEPDC7-204ENST00000532078 TTC14Q96N46 770 aa17.87■□□□□ 0.45
DEPDC7-204ENST00000532078 CDX2Q99626 313 aaPredicted RBP17.87■□□□□ 0.45
DEPDC7-204ENST00000532078 PDHBP11177 359 aa17.86■□□□□ 0.45
DEPDC7-204ENST00000532078 SMPD1P17405 629 aa17.86■□□□□ 0.45
DEPDC7-204ENST00000532078 NT5C2P49902 561 aa17.86■□□□□ 0.45
DEPDC7-204ENST00000532078 BAATQ14032 418 aaPredicted RBP17.86■□□□□ 0.45
DEPDC7-204ENST00000532078 B4GALNT3Q6L9W6 998 aa17.86■□□□□ 0.45
DEPDC7-204ENST00000532078 TAPT1Q6NXT6 567 aa17.86■□□□□ 0.45
DEPDC7-204ENST00000532078 CXCL17Q6UXB2 119 aa17.86■□□□□ 0.45
DEPDC7-204ENST00000532078 EEPD1Q7L9B9 569 aa17.86■□□□□ 0.45
DEPDC7-204ENST00000532078 CHD1LQ86WJ1 897 aa17.86■□□□□ 0.45
DEPDC7-204ENST00000532078 TMEM199Q8N511 208 aa17.86■□□□□ 0.45
DEPDC7-204ENST00000532078 ESR2Q92731 530 aa17.86■□□□□ 0.45
DEPDC7-204ENST00000532078 SEZ6LQ9BYH1 1024 aa17.86■□□□□ 0.45
DEPDC7-204ENST00000532078 TTYH1Q9H313 450 aaPredicted RBP17.86■□□□□ 0.45
DEPDC7-204ENST00000532078 Q9Y3F1 56 aa17.86■□□□□ 0.45
DEPDC7-204ENST00000532078 DDX49Q9Y6V7 483 aaKnown RBP17.86■□□□□ 0.45
DEPDC7-204ENST00000532078 EYSQ5T1H1 3165 aa17.86■□□□□ 0.45
DEPDC7-204ENST00000532078 PTPDC1A2A3K4 754 aa17.85■□□□□ 0.45
DEPDC7-204ENST00000532078 NFIBO00712 420 aa17.85■□□□□ 0.45
DEPDC7-204ENST00000532078 DYNC1LI2O43237 492 aaPredicted RBP17.85■□□□□ 0.45
DEPDC7-204ENST00000532078 SDSP20132 328 aa17.85■□□□□ 0.45
DEPDC7-204ENST00000532078 ALDH5A1P51649 535 aaPredicted RBP17.85■□□□□ 0.45
DEPDC7-204ENST00000532078 ZNF543Q08ER8 600 aa17.85■□□□□ 0.45
DEPDC7-204ENST00000532078 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.85■□□□□ 0.45
DEPDC7-204ENST00000532078 SLC43A3Q8NBI5 491 aa17.85■□□□□ 0.45
DEPDC7-204ENST00000532078 WDR19Q8NEZ3 1342 aa17.85■□□□□ 0.45
DEPDC7-204ENST00000532078 PPP1R12CQ9BZL4 782 aa17.85■□□□□ 0.45
DEPDC7-204ENST00000532078 OSBPL3Q9H4L5 887 aa17.85■□□□□ 0.45
DEPDC7-204ENST00000532078 PDGFCQ9NRA1 345 aa17.85■□□□□ 0.45
DEPDC7-204ENST00000532078 NEDD4P46934 1319 aa17.84■□□□□ 0.45
DEPDC7-204ENST00000532078 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.84■□□□□ 0.45
DEPDC7-204ENST00000532078 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.84■□□□□ 0.45
DEPDC7-204ENST00000532078 CD4P01730 458 aa17.84■□□□□ 0.45
DEPDC7-204ENST00000532078 SNHG28P0DPA3 235 aa17.84■□□□□ 0.45
DEPDC7-204ENST00000532078 NUCB1Q02818 461 aa17.84■□□□□ 0.45
DEPDC7-204ENST00000532078 ITGA7Q13683 1181 aa17.84■□□□□ 0.45
DEPDC7-204ENST00000532078 GPATCH4Q5T3I0 446 aaKnown RBP17.84■□□□□ 0.45
DEPDC7-204ENST00000532078 PSRC1Q6PGN9 363 aaPredicted RBP17.84■□□□□ 0.45
DEPDC7-204ENST00000532078 KIAA1211Q6ZU35 1233 aa17.84■□□□□ 0.45
DEPDC7-204ENST00000532078 PLEKHM2Q8IWE5 1019 aa17.84■□□□□ 0.45
DEPDC7-204ENST00000532078 PURBQ96QR8 312 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms