RNA–Protein interactions for RNA: ENST00000531939.5

IFT46-209, Transcript of intraflagellar transport 46, humanhuman

TSL 2

Gene IFT46, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-209ENST00000531939 LBX1P52954 281 aa8.42□□□□□ -1.06
IFT46-209ENST00000531939 AAMPQ13685 434 aa8.42□□□□□ -1.06
IFT46-209ENST00000531939 AOC3Q16853 763 aa8.42□□□□□ -1.06
IFT46-209ENST00000531939 LCE4AQ5TA78 99 aa8.42□□□□□ -1.06
IFT46-209ENST00000531939 CST9Q5W186 159 aa8.42□□□□□ -1.06
IFT46-209ENST00000531939 PHLDB3Q6NSJ2 640 aa8.42□□□□□ -1.06
IFT46-209ENST00000531939 USP50Q70EL3 339 aaPredicted RBP8.42□□□□□ -1.06
IFT46-209ENST00000531939 NIM1KQ8IY84 436 aa8.42□□□□□ -1.06
IFT46-209ENST00000531939 FAM168AQ92567 244 aa8.42□□□□□ -1.06
IFT46-209ENST00000531939 SLC38A3Q99624 504 aa8.42□□□□□ -1.06
IFT46-209ENST00000531939 CORO1BQ9BR76 489 aa8.42□□□□□ -1.06
IFT46-209ENST00000531939 UTP14AQ9BVJ6 771 aaKnown RBP8.42□□□□□ -1.06
IFT46-209ENST00000531939 VPS33BQ9H267 617 aa8.42□□□□□ -1.06
IFT46-209ENST00000531939 LATS2Q9NRM7 1088 aa8.42□□□□□ -1.06
IFT46-209ENST00000531939 BABAM1Q9NWV8 329 aa8.42□□□□□ -1.06
IFT46-209ENST00000531939 AP4E1Q9UPM8 1137 aa8.42□□□□□ -1.06
IFT46-209ENST00000531939 MAPK8IP3Q9UPT6 1336 aa8.42□□□□□ -1.06
IFT46-209ENST00000531939 DUOX1Q9NRD9 1551 aa8.42□□□□□ -1.06
IFT46-209ENST00000531939 LRRC37AA6NMS7 1700 aa8.42□□□□□ -1.06
IFT46-209ENST00000531939 DDX60Q8IY21 1712 aaKnown RBP8.42□□□□□ -1.06
IFT46-209ENST00000531939 SYNGAP1Q96PV0 1343 aa8.41□□□□□ -1.06
IFT46-209ENST00000531939 METTL12A8MUP2 240 aa8.41□□□□□ -1.06
IFT46-209ENST00000531939 TRAF5O00463 557 aa8.41□□□□□ -1.06
IFT46-209ENST00000531939 PPIP5K2O43314 1243 aa8.41□□□□□ -1.06
IFT46-209ENST00000531939 EIF2S2P20042 333 aaKnown RBP8.41□□□□□ -1.06
IFT46-209ENST00000531939 RIPK4P57078 832 aa8.41□□□□□ -1.06
IFT46-209ENST00000531939 ZNF423Q2M1K9 1284 aa8.41□□□□□ -1.06
IFT46-209ENST00000531939 KRTAP19-4Q3LI73 84 aa8.41□□□□□ -1.06
IFT46-209ENST00000531939 SPOCD1Q6ZMY3 1216 aa8.41□□□□□ -1.06
IFT46-209ENST00000531939 NLRP10Q86W26 655 aa8.41□□□□□ -1.06
IFT46-209ENST00000531939 WFDC3Q8IUB2 231 aa8.41□□□□□ -1.06
IFT46-209ENST00000531939 GLIS3Q8NEA6 775 aa8.41□□□□□ -1.06
IFT46-209ENST00000531939 PNNQ9H307 717 aaKnown RBP8.41□□□□□ -1.06
IFT46-209ENST00000531939 RC3H2Q9HBD1 1191 aaKnown RBP8.41□□□□□ -1.06
IFT46-209ENST00000531939 GPRC5DQ9NZD1 345 aa8.41□□□□□ -1.06
IFT46-209ENST00000531939 FOXD3Q9UJU5 478 aaPredicted RBP8.41□□□□□ -1.06
IFT46-209ENST00000531939 ABT1Q9ULW3 272 aaKnown RBP8.41□□□□□ -1.06
IFT46-209ENST00000531939 DAGLAQ9Y4D2 1042 aa8.41□□□□□ -1.06
IFT46-209ENST00000531939 IVNS1ABPQ9Y6Y0 642 aa8.41□□□□□ -1.06
IFT46-209ENST00000531939 COL4A1P02462 1669 aa8.4□□□□□ -1.06
IFT46-209ENST00000531939 PATL2C9JE40 543 aaKnown RBP8.4□□□□□ -1.06
IFT46-209ENST00000531939 BBOX1O75936 387 aa8.4□□□□□ -1.06
IFT46-209ENST00000531939 HCLS1P14317 486 aaPredicted RBP8.4□□□□□ -1.06
IFT46-209ENST00000531939 TMPOP42166 694 aaKnown RBP8.4□□□□□ -1.06
IFT46-209ENST00000531939 HNRNPUQ00839 825 aaKnown RBP eCLIP8.4□□□□□ -1.06
IFT46-209ENST00000531939 MAP2K1Q02750 393 aaPredicted RBP8.4□□□□□ -1.06
IFT46-209ENST00000531939 CXCL9Q07325 125 aa8.4□□□□□ -1.06
IFT46-209ENST00000531939 COPS6Q7L5N1 327 aa8.4□□□□□ -1.06
IFT46-209ENST00000531939 CCNJLQ8IV13 435 aa8.4□□□□□ -1.06
IFT46-209ENST00000531939 SP8Q8IXZ3 490 aa8.4□□□□□ -1.06
IFT46-209ENST00000531939 NETO1Q8TDF5 533 aa8.4□□□□□ -1.06
IFT46-209ENST00000531939 XAGE3Q8WTP9 111 aa8.4□□□□□ -1.06
IFT46-209ENST00000531939 CAPNS2Q96L46 248 aa8.4□□□□□ -1.06
IFT46-209ENST00000531939 GZF1Q9H116 711 aaPredicted RBP8.4□□□□□ -1.06
IFT46-209ENST00000531939 ZFYVE28Q9HCC9 887 aa8.4□□□□□ -1.06
IFT46-209ENST00000531939 ADARB2Q9NS39 739 aaKnown RBP8.4□□□□□ -1.06
IFT46-209ENST00000531939 PGAP2Q9UHJ9 254 aa8.4□□□□□ -1.06
IFT46-209ENST00000531939 VAV3Q9UKW4 847 aa8.4□□□□□ -1.06
IFT46-209ENST00000531939 ZNRF3Q9ULT6 936 aa8.4□□□□□ -1.06
IFT46-209ENST00000531939 POLR2AP24928 1970 aaKnown RBP8.4□□□□□ -1.06
IFT46-209ENST00000531939 YDJCA8MPS7 323 aa8.39□□□□□ -1.07
IFT46-209ENST00000531939 CHL1O00533 1208 aa8.39□□□□□ -1.07
IFT46-209ENST00000531939 GMPSP49915 693 aaPredicted RBP8.39□□□□□ -1.07
IFT46-209ENST00000531939 KIAA2012Q0VF49 1180 aa8.39□□□□□ -1.07
IFT46-209ENST00000531939 TCIRG1Q13488 830 aa8.39□□□□□ -1.07
IFT46-209ENST00000531939 GRAPQ13588 217 aa8.39□□□□□ -1.07
IFT46-209ENST00000531939 KRT24Q2M2I5 525 aa8.39□□□□□ -1.07
IFT46-209ENST00000531939 HSP90AB3PQ58FF7 597 aa8.39□□□□□ -1.07
IFT46-209ENST00000531939 CYP4F22Q6NT55 531 aa8.39□□□□□ -1.07
IFT46-209ENST00000531939 SUPT20HQ8NEM7 779 aa8.39□□□□□ -1.07
IFT46-209ENST00000531939 GRAPLQ8TC17 118 aaPredicted RBP8.39□□□□□ -1.07
IFT46-209ENST00000531939 GTF3C2Q8WUA4 911 aaPredicted RBP8.39□□□□□ -1.07
IFT46-209ENST00000531939 SH3TC1Q8TE82 1336 aa8.38□□□□□ -1.07
IFT46-209ENST00000531939 CDHR2Q9BYE9 1310 aa8.38□□□□□ -1.07
IFT46-209ENST00000531939 SHTN1A0MZ66 631 aa8.38□□□□□ -1.07
IFT46-209ENST00000531939 DYNC1LI2O43237 492 aaPredicted RBP8.38□□□□□ -1.07
IFT46-209ENST00000531939 CTSBP07858 339 aa8.38□□□□□ -1.07
IFT46-209ENST00000531939 NPR3P17342 541 aa8.38□□□□□ -1.07
IFT46-209ENST00000531939 ECE1P42892 770 aa8.38□□□□□ -1.07
IFT46-209ENST00000531939 AIMP1Q12904 312 aaKnown RBP8.38□□□□□ -1.07
IFT46-209ENST00000531939 BNIP3Q12983 259 aa8.38□□□□□ -1.07
IFT46-209ENST00000531939 RALBP1Q15311 655 aa8.38□□□□□ -1.07
IFT46-209ENST00000531939 CIAPIN1Q6FI81 312 aa8.38□□□□□ -1.07
IFT46-209ENST00000531939 DPP8Q6V1X1 898 aaPredicted RBP8.38□□□□□ -1.07
IFT46-209ENST00000531939 SAPCD2Q86UD0 394 aa8.38□□□□□ -1.07
IFT46-209ENST00000531939 BHLHE22Q8NFJ8 381 aaPredicted RBP8.38□□□□□ -1.07
IFT46-209ENST00000531939 ABHD8Q96I13 439 aa8.38□□□□□ -1.07
IFT46-209ENST00000531939 CASP8AP2Q9UKL3 1982 aa8.38□□□□□ -1.07
IFT46-209ENST00000531939 SCN9AQ15858 1988 aa8.37□□□□□ -1.07
IFT46-209ENST00000531939 AOC2O75106 756 aa8.37□□□□□ -1.07
IFT46-209ENST00000531939 RAD17O75943 681 aa8.37□□□□□ -1.07
IFT46-209ENST00000531939 FAM13AO94988 1023 aa8.37□□□□□ -1.07
IFT46-209ENST00000531939 CELF2O95319 508 aaKnown RBP8.37□□□□□ -1.07
IFT46-209ENST00000531939 PRKCQQ04759 706 aa8.37□□□□□ -1.07
IFT46-209ENST00000531939 LMOD3Q0VAK6 560 aa8.37□□□□□ -1.07
IFT46-209ENST00000531939 DDX46Q7L014 1031 aaKnown RBP8.37□□□□□ -1.07
IFT46-209ENST00000531939 PI4K2BQ8TCG2 481 aa8.37□□□□□ -1.07
IFT46-209ENST00000531939 GPR101Q96P66 508 aaPredicted RBP8.37□□□□□ -1.07
IFT46-209ENST00000531939 IPO9Q96P70 1041 aaKnown RBP8.37□□□□□ -1.07
IFT46-209ENST00000531939 ISCA1Q9BUE6 129 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms