RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 CALML3P27482 149 aa19.73■□□□□ 0.75
CPSF1-207ENST00000531727 TMEM63BQ5T3F8 832 aa19.73■□□□□ 0.75
CPSF1-207ENST00000531727 RNF207Q6ZRF8 634 aa19.73■□□□□ 0.75
CPSF1-207ENST00000531727 PNMA1Q8ND90 353 aa19.73■□□□□ 0.75
CPSF1-207ENST00000531727 ANKS1AQ92625 1134 aa19.73■□□□□ 0.75
CPSF1-207ENST00000531727 CTNNA3Q9UI47 895 aa19.73■□□□□ 0.75
CPSF1-207ENST00000531727 B4E1Z4 1266 aa19.72■□□□□ 0.75
CPSF1-207ENST00000531727 CD4P01730 458 aa19.72■□□□□ 0.75
CPSF1-207ENST00000531727 IMMTQ16891 758 aaKnown RBP19.72■□□□□ 0.75
CPSF1-207ENST00000531727 DUSP28Q4G0W2 176 aa19.72■□□□□ 0.75
CPSF1-207ENST00000531727 ZSCAN10Q96SZ4 725 aaPredicted RBP19.72■□□□□ 0.75
CPSF1-207ENST00000531727 KAT14Q9H8E8 782 aa19.72■□□□□ 0.75
CPSF1-207ENST00000531727 RBM47A0AV96 593 aaKnown RBP19.71■□□□□ 0.75
CPSF1-207ENST00000531727 RPS6P62753 249 aaKnown RBP19.71■□□□□ 0.75
CPSF1-207ENST00000531727 PPIGQ13427 754 aaKnown RBP eCLIP19.71■□□□□ 0.759e-11■■■□□ 17.1
CPSF1-207ENST00000531727 ITGA7Q13683 1181 aa19.71■□□□□ 0.75
CPSF1-207ENST00000531727 ENAHQ8N8S7 591 aaPredicted RBP19.71■□□□□ 0.75
CPSF1-207ENST00000531727 MPHOSPH6Q99547 160 aaKnown RBP19.71■□□□□ 0.75
CPSF1-207ENST00000531727 SEZ6LQ9BYH1 1024 aa19.71■□□□□ 0.75
CPSF1-207ENST00000531727 WDR11Q9BZH6 1224 aa19.71■□□□□ 0.75
CPSF1-207ENST00000531727 UBA5Q9GZZ9 404 aa19.71■□□□□ 0.75
CPSF1-207ENST00000531727 SEMA6BQ9H3T3 888 aa19.71■□□□□ 0.75
CPSF1-207ENST00000531727 ZSWIM5Q9P217 1185 aa19.71■□□□□ 0.75
CPSF1-207ENST00000531727 SUPT16HQ9Y5B9 1047 aaKnown RBP19.71■□□□□ 0.75
CPSF1-207ENST00000531727 GRIN2DO15399 1336 aa19.71■□□□□ 0.75
CPSF1-207ENST00000531727 USH1GQ495M9 461 aa19.7■□□□□ 0.74
CPSF1-207ENST00000531727 ASPRV1Q53RT3 343 aa19.7■□□□□ 0.74
CPSF1-207ENST00000531727 TMEM199Q8N511 208 aa19.7■□□□□ 0.74
CPSF1-207ENST00000531727 DNERQ8NFT8 737 aa19.7■□□□□ 0.74
CPSF1-207ENST00000531727 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.7■□□□□ 0.742e-20■□□□□ 9.4
CPSF1-207ENST00000531727 PPP1R12CQ9BZL4 782 aa19.7■□□□□ 0.74
CPSF1-207ENST00000531727 KRT23Q9C075 422 aa19.7■□□□□ 0.74
CPSF1-207ENST00000531727 CPVLQ9H3G5 476 aa19.7■□□□□ 0.74
CPSF1-207ENST00000531727 GSPT1P15170 499 aaKnown RBP19.69■□□□□ 0.74
CPSF1-207ENST00000531727 CSF2RAP15509 400 aa19.69■□□□□ 0.74
CPSF1-207ENST00000531727 EDNRBP24530 442 aa19.69■□□□□ 0.74
CPSF1-207ENST00000531727 PDE4AP27815 886 aa19.69■□□□□ 0.74
CPSF1-207ENST00000531727 PDE4DQ08499 809 aa19.69■□□□□ 0.74
CPSF1-207ENST00000531727 RGS22Q8NE09 1264 aa19.69■□□□□ 0.74
CPSF1-207ENST00000531727 CDX2Q99626 313 aaPredicted RBP19.69■□□□□ 0.74
CPSF1-207ENST00000531727 IL25Q9H293 177 aa19.69■□□□□ 0.74
CPSF1-207ENST00000531727 TTYH1Q9H313 450 aaPredicted RBP19.69■□□□□ 0.74
CPSF1-207ENST00000531727 CNNM2Q9H8M5 875 aa19.69■□□□□ 0.74
CPSF1-207ENST00000531727 TNKSO95271 1327 aa19.69■□□□□ 0.74
CPSF1-207ENST00000531727 TMEM265A0A087WTH1 108 aa19.68■□□□□ 0.74
CPSF1-207ENST00000531727 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.68■□□□□ 0.74
CPSF1-207ENST00000531727 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.68■□□□□ 0.74
CPSF1-207ENST00000531727 CDC37Q16543 378 aaPredicted RBP19.68■□□□□ 0.74
CPSF1-207ENST00000531727 TMEM240Q5SV17 173 aa19.68■□□□□ 0.74
CPSF1-207ENST00000531727 TTC22Q5TAA0 569 aa19.68■□□□□ 0.74
CPSF1-207ENST00000531727 C16orf59Q7L2K0 433 aa19.68■□□□□ 0.74
CPSF1-207ENST00000531727 ADGRF4Q8IZF3 695 aa19.68■□□□□ 0.74
CPSF1-207ENST00000531727 MAF1Q9H063 256 aa19.68■□□□□ 0.74
CPSF1-207ENST00000531727 POLR3EQ9NVU0 708 aa19.68■□□□□ 0.74
CPSF1-207ENST00000531727 B4DLN1 442 aa19.67■□□□□ 0.74
CPSF1-207ENST00000531727 CYP2C18P33260 490 aa19.67■□□□□ 0.74
CPSF1-207ENST00000531727 CPT1AP50416 773 aa19.67■□□□□ 0.74
CPSF1-207ENST00000531727 MRPL12P52815 198 aaKnown RBP19.67■□□□□ 0.74
CPSF1-207ENST00000531727 PSMC6P62333 389 aa19.67■□□□□ 0.74
CPSF1-207ENST00000531727 OR6J1Q8NGC5 347 aa19.67■□□□□ 0.74
CPSF1-207ENST00000531727 UBAC1Q9BSL1 405 aa19.67■□□□□ 0.74
CPSF1-207ENST00000531727 HIPK3Q9H422 1215 aa19.67■□□□□ 0.74
CPSF1-207ENST00000531727 ABCB11O95342 1321 aa19.67■□□□□ 0.74
CPSF1-207ENST00000531727 RAD50Q92878 1312 aa19.67■□□□□ 0.74
CPSF1-207ENST00000531727 DLL1O00548 723 aa19.66■□□□□ 0.74
CPSF1-207ENST00000531727 NKRFO15226 690 aaKnown RBP eCLIP19.66■□□□□ 0.74
CPSF1-207ENST00000531727 B4GALT4O60513 344 aa19.66■□□□□ 0.74
CPSF1-207ENST00000531727 PARP1P09874 1014 aaKnown RBP19.66■□□□□ 0.74
CPSF1-207ENST00000531727 PPP2R5BQ15173 497 aa19.66■□□□□ 0.74
CPSF1-207ENST00000531727 PSRC1Q6PGN9 363 aaPredicted RBP19.66■□□□□ 0.74
CPSF1-207ENST00000531727 SCFD2Q8WU76 684 aa19.66■□□□□ 0.74
CPSF1-207ENST00000531727 TRPV6Q9H1D0 765 aa19.66■□□□□ 0.74
CPSF1-207ENST00000531727 MYH6P13533 1939 aa19.66■□□□□ 0.74
CPSF1-207ENST00000531727 ACRP10323 421 aa19.65■□□□□ 0.74
CPSF1-207ENST00000531727 DNAJB2P25686 324 aa19.65■□□□□ 0.74
CPSF1-207ENST00000531727 PURAQ00577 322 aaKnown RBP19.65■□□□□ 0.74
CPSF1-207ENST00000531727 IFIT1BQ5T764 474 aaKnown RBP19.65■□□□□ 0.74
CPSF1-207ENST00000531727 RASIP1Q5U651 963 aa19.65■□□□□ 0.74
CPSF1-207ENST00000531727 ZNF365Q70YC5 407 aa19.65■□□□□ 0.74
CPSF1-207ENST00000531727 NOC4LQ9BVI4 516 aaKnown RBP19.65■□□□□ 0.74
CPSF1-207ENST00000531727 IL23AQ9NPF7 189 aa19.65■□□□□ 0.74
CPSF1-207ENST00000531727 DHX16O60231 1041 aaKnown RBP19.64■□□□□ 0.73
CPSF1-207ENST00000531727 MYL3P08590 195 aa19.64■□□□□ 0.73
CPSF1-207ENST00000531727 SEC23AQ15436 765 aa19.64■□□□□ 0.73
CPSF1-207ENST00000531727 QRICH1Q2TAL8 776 aa19.64■□□□□ 0.73
CPSF1-207ENST00000531727 BRDTQ58F21 947 aaPredicted RBP19.64■□□□□ 0.73
CPSF1-207ENST00000531727 SYTL5Q8TDW5 730 aaPredicted RBP19.64■□□□□ 0.73
CPSF1-207ENST00000531727 MYLIPQ8WY64 445 aa19.64■□□□□ 0.73
CPSF1-207ENST00000531727 TBC1D5Q92609 795 aa19.64■□□□□ 0.73
CPSF1-207ENST00000531727 MTG1Q9BT17 334 aaPredicted RBP19.64■□□□□ 0.73
CPSF1-207ENST00000531727 ALDH8A1Q9H2A2 487 aaPredicted RBP19.64■□□□□ 0.73
CPSF1-207ENST00000531727 JMJD4Q9H9V9 463 aa19.64■□□□□ 0.73
CPSF1-207ENST00000531727 UMODL1Q5DID0 1318 aa19.64■□□□□ 0.73
CPSF1-207ENST00000531727 TTLL4Q14679 1199 aa19.63■□□□□ 0.73
CPSF1-207ENST00000531727 CYB5R4Q7L1T6 521 aa19.63■□□□□ 0.73
CPSF1-207ENST00000531727 FBXO11Q86XK2 927 aa19.63■□□□□ 0.73
CPSF1-207ENST00000531727 MCF2L2Q86YR7 1114 aa19.63■□□□□ 0.73
CPSF1-207ENST00000531727 RUFY2Q8WXA3 655 aa19.63■□□□□ 0.73
CPSF1-207ENST00000531727 VAT1LQ9HCJ6 419 aa19.63■□□□□ 0.73
CPSF1-207ENST00000531727 GPHNQ9NQX3 736 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms