RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 HAND2P61296 217 aa21.73■■□□□ 1.07
SSSCA1-206ENST00000531405 BTNL9Q6UXG8 535 aa21.73■■□□□ 1.07
SSSCA1-206ENST00000531405 ZNF589Q86UQ0 364 aaPredicted RBP21.73■■□□□ 1.07
SSSCA1-206ENST00000531405 MORC4Q8TE76 937 aa21.73■■□□□ 1.07
SSSCA1-206ENST00000531405 SCN10AQ9Y5Y9 1956 aa21.73■■□□□ 1.07
SSSCA1-206ENST00000531405 TRIP12Q14669 1992 aaPredicted RBP21.72■■□□□ 1.07
SSSCA1-206ENST00000531405 ZEB2O60315 1214 aa21.72■■□□□ 1.07
SSSCA1-206ENST00000531405 HSPD1P10809 573 aaKnown RBP21.72■■□□□ 1.07
SSSCA1-206ENST00000531405 NMIQ13287 307 aaPredicted RBP21.72■■□□□ 1.07
SSSCA1-206ENST00000531405 MCMDC2Q4G0Z9 681 aa21.72■■□□□ 1.07
SSSCA1-206ENST00000531405 SLC30A10Q6XR72 485 aa21.72■■□□□ 1.07
SSSCA1-206ENST00000531405 NOC4LQ9BVI4 516 aaKnown RBP21.72■■□□□ 1.07
SSSCA1-206ENST00000531405 Q9Y3F1 56 aa21.72■■□□□ 1.07
SSSCA1-206ENST00000531405 TANC1Q9C0D5 1861 aa21.71■■□□□ 1.07
SSSCA1-206ENST00000531405 KIAA1217Q5T5P2 1943 aa21.71■■□□□ 1.07
SSSCA1-206ENST00000531405 PTPDC1A2A3K4 754 aa21.71■■□□□ 1.07
SSSCA1-206ENST00000531405 HERVK_113Q902F9 699 aa21.71■■□□□ 1.07
SSSCA1-206ENST00000531405 WNT8AQ9H1J5 351 aa21.71■■□□□ 1.07
SSSCA1-206ENST00000531405 PRDM12Q9H4Q4 367 aa21.71■■□□□ 1.07
SSSCA1-206ENST00000531405 FGBP02675 491 aa21.7■■□□□ 1.06
SSSCA1-206ENST00000531405 PDHBP11177 359 aa21.7■■□□□ 1.06
SSSCA1-206ENST00000531405 CALML3P27482 149 aa21.7■■□□□ 1.06
SSSCA1-206ENST00000531405 DUSP28Q4G0W2 176 aa21.7■■□□□ 1.06
SSSCA1-206ENST00000531405 OTOP2Q7RTS6 562 aa21.7■■□□□ 1.06
SSSCA1-206ENST00000531405 CLEC4DQ8WXI8 215 aa21.7■■□□□ 1.06
SSSCA1-206ENST00000531405 PPM1EQ8WY54 764 aa21.7■■□□□ 1.06
SSSCA1-206ENST00000531405 WDR11Q9BZH6 1224 aa21.7■■□□□ 1.06
SSSCA1-206ENST00000531405 PRDM6Q9NQX0 595 aa21.7■■□□□ 1.06
SSSCA1-206ENST00000531405 TCP11L1Q9NUJ3 509 aa21.7■■□□□ 1.06
SSSCA1-206ENST00000531405 ADD3Q9UEY8 706 aaKnown RBP21.7■■□□□ 1.06
SSSCA1-206ENST00000531405 TRIM6-TRIM34B2RNG4 842 aa21.68■■□□□ 1.06
SSSCA1-206ENST00000531405 HDAC1Q13547 482 aaPredicted RBP21.68■■□□□ 1.06
SSSCA1-206ENST00000531405 TBC1D10CQ8IV04 446 aa21.68■■□□□ 1.06
SSSCA1-206ENST00000531405 PPP1R13LQ8WUF5 828 aa21.68■■□□□ 1.06
SSSCA1-206ENST00000531405 SCLYQ96I15 445 aa21.68■■□□□ 1.06
SSSCA1-206ENST00000531405 GAS2L1Q99501 681 aaPredicted RBP21.68■■□□□ 1.06
SSSCA1-206ENST00000531405 LNPKQ9C0E8 428 aa21.68■■□□□ 1.06
SSSCA1-206ENST00000531405 ALDH8A1Q9H2A2 487 aaPredicted RBP21.68■■□□□ 1.06
SSSCA1-206ENST00000531405 NKX2-4Q9H2Z4 354 aa21.68■■□□□ 1.06
SSSCA1-206ENST00000531405 TRMT13Q9NUP7 481 aaKnown RBP21.68■■□□□ 1.06
SSSCA1-206ENST00000531405 ZMYM6O95789 1325 aa21.68■■□□□ 1.06
SSSCA1-206ENST00000531405 CCDC171Q6TFL3 1326 aa21.68■■□□□ 1.06
SSSCA1-206ENST00000531405 MYH7BA7E2Y1 1941 aa21.68■■□□□ 1.06
SSSCA1-206ENST00000531405 TET1Q8NFU7 2136 aa21.68■■□□□ 1.06
SSSCA1-206ENST00000531405 MYL3P08590 195 aa21.67■■□□□ 1.06
SSSCA1-206ENST00000531405 ZNF543Q08ER8 600 aa21.67■■□□□ 1.06
SSSCA1-206ENST00000531405 AKNAD1Q5T1N1 836 aa21.67■■□□□ 1.06
SSSCA1-206ENST00000531405 RNF207Q6ZRF8 634 aa21.67■■□□□ 1.06
SSSCA1-206ENST00000531405 OR6J1Q8NGC5 347 aa21.67■■□□□ 1.06
SSSCA1-206ENST00000531405 RILPL2Q969X0 211 aa21.67■■□□□ 1.06
SSSCA1-206ENST00000531405 VWCEQ96DN2 955 aa21.67■■□□□ 1.06
SSSCA1-206ENST00000531405 SEZ6LQ9BYH1 1024 aa21.67■■□□□ 1.06
SSSCA1-206ENST00000531405 MSRAQ9UJ68 235 aa21.67■■□□□ 1.06
SSSCA1-206ENST00000531405 YBX2Q9Y2T7 364 aaKnown RBP21.67■■□□□ 1.06
SSSCA1-206ENST00000531405 NEDD4P46934 1319 aa21.66■■□□□ 1.06
SSSCA1-206ENST00000531405 RBM47A0AV96 593 aaKnown RBP21.66■■□□□ 1.06
SSSCA1-206ENST00000531405 CYP2C9P11712 490 aa21.66■■□□□ 1.06
SSSCA1-206ENST00000531405 RABGGTBP53611 331 aa21.66■■□□□ 1.06
SSSCA1-206ENST00000531405 PURAQ00577 322 aaKnown RBP21.66■■□□□ 1.06
SSSCA1-206ENST00000531405 RAB30Q15771 203 aa21.66■■□□□ 1.06
SSSCA1-206ENST00000531405 MFSD6Q6ZSS7 791 aa21.66■■□□□ 1.06
SSSCA1-206ENST00000531405 ZKSCAN3Q9BRR0 538 aa21.66■■□□□ 1.06
SSSCA1-206ENST00000531405 MTIF3Q9H2K0 278 aaKnown RBP21.66■■□□□ 1.06
SSSCA1-206ENST00000531405 CPVLQ9H3G5 476 aa21.66■■□□□ 1.06
SSSCA1-206ENST00000531405 PTPRSQ13332 1948 aa21.66■■□□□ 1.06
SSSCA1-206ENST00000531405 XIRP2A4UGR9 3374 aa21.65■■□□□ 1.06
SSSCA1-206ENST00000531405 TNKSO95271 1327 aa21.65■■□□□ 1.06
SSSCA1-206ENST00000531405 GOLGA8HP0CJ92 632 aa21.65■■□□□ 1.06
SSSCA1-206ENST00000531405 SNHG28P0DPA3 235 aa21.65■■□□□ 1.06
SSSCA1-206ENST00000531405 RPS6P62753 249 aaKnown RBP21.65■■□□□ 1.06
SSSCA1-206ENST00000531405 PDE4DQ08499 809 aa21.65■■□□□ 1.06
SSSCA1-206ENST00000531405 ADGRE1Q14246 886 aa21.65■■□□□ 1.06
SSSCA1-206ENST00000531405 COPS5Q92905 334 aa21.65■■□□□ 1.06
SSSCA1-206ENST00000531405 POLR3EQ9NVU0 708 aa21.65■■□□□ 1.06
SSSCA1-206ENST00000531405 NCOR1O75376 2440 aa21.64■■□□□ 1.05
SSSCA1-206ENST00000531405 LOC102724159A0A0B4J2E5 919 aa21.64■■□□□ 1.05
SSSCA1-206ENST00000531405 CPT1AP50416 773 aa21.64■■□□□ 1.05
SSSCA1-206ENST00000531405 PWP2Q15269 919 aaKnown RBP21.64■■□□□ 1.05
SSSCA1-206ENST00000531405 USH1GQ495M9 461 aa21.64■■□□□ 1.05
SSSCA1-206ENST00000531405 SYMPKQ92797 1274 aaKnown RBP21.64■■□□□ 1.05
SSSCA1-206ENST00000531405 TTC14Q96N46 770 aa21.64■■□□□ 1.05
SSSCA1-206ENST00000531405 TCF20Q9UGU0 1960 aaKnown RBP21.63■■□□□ 1.05
SSSCA1-206ENST00000531405 WDR19Q8NEZ3 1342 aa21.63■■□□□ 1.05
SSSCA1-206ENST00000531405 ZBBXA8MT70 800 aa21.63■■□□□ 1.05
SSSCA1-206ENST00000531405 MYOGP15173 224 aa21.63■■□□□ 1.05
SSSCA1-206ENST00000531405 IGFBP4P22692 258 aa21.63■■□□□ 1.05
SSSCA1-206ENST00000531405 PPP2R5BQ15173 497 aa21.63■■□□□ 1.05
SSSCA1-206ENST00000531405 CCDC85BQ15834 202 aaPredicted RBP21.63■■□□□ 1.05
SSSCA1-206ENST00000531405 FAM47CQ5HY64 1035 aa21.63■■□□□ 1.05
SSSCA1-206ENST00000531405 TJAP1Q5JTD0 557 aa21.63■■□□□ 1.05
SSSCA1-206ENST00000531405 B4GALNT3Q6L9W6 998 aa21.63■■□□□ 1.05
SSSCA1-206ENST00000531405 RPUSD2Q8IZ73 545 aaKnown RBP21.63■■□□□ 1.05
SSSCA1-206ENST00000531405 MTG1Q9BT17 334 aaPredicted RBP21.63■■□□□ 1.05
SSSCA1-206ENST00000531405 SLC28A3Q9HAS3 691 aa21.63■■□□□ 1.05
SSSCA1-206ENST00000531405 SLC4A7Q9Y6M7 1214 aa21.63■■□□□ 1.05
SSSCA1-206ENST00000531405 BDP1A6H8Y1 2624 aa21.63■■□□□ 1.05
SSSCA1-206ENST00000531405 EDNRBP24530 442 aa21.62■■□□□ 1.05
SSSCA1-206ENST00000531405 TTLL4Q14679 1199 aa21.62■■□□□ 1.05
SSSCA1-206ENST00000531405 NBPF20Q3BBV1 942 aa21.62■■□□□ 1.05
SSSCA1-206ENST00000531405 DEFB128Q7Z7B8 93 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms