RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 TAPT1Q6NXT6 567 aa12.77□□□□□ -0.37
CAPN1-221ENST00000531068 EEPD1Q7L9B9 569 aa12.77□□□□□ -0.37
CAPN1-221ENST00000531068 IGDCC4Q8TDY8 1250 aa12.77□□□□□ -0.37
CAPN1-221ENST00000531068 LENG1Q96BZ8 264 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-221ENST00000531068 IL17RAQ96F46 866 aa12.77□□□□□ -0.37
CAPN1-221ENST00000531068 TOX2Q96NM4 488 aa12.77□□□□□ -0.37
CAPN1-221ENST00000531068 USP26Q9BXU7 913 aa12.77□□□□□ -0.37
CAPN1-221ENST00000531068 CPVLQ9H3G5 476 aa12.77□□□□□ -0.37
CAPN1-221ENST00000531068 STARD7Q9NQZ5 370 aa12.77□□□□□ -0.37
CAPN1-221ENST00000531068 MAD2L2Q9UI95 211 aa12.77□□□□□ -0.37
CAPN1-221ENST00000531068 ELP1O95163 1332 aa12.77□□□□□ -0.37
CAPN1-221ENST00000531068 MYH8P13535 1937 aa12.76□□□□□ -0.37
CAPN1-221ENST00000531068 DCDC2CA8MYV0 355 aa12.76□□□□□ -0.37
CAPN1-221ENST00000531068 ZBTB5O15062 677 aa12.76□□□□□ -0.37
CAPN1-221ENST00000531068 DYNC1LI2O43237 492 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-221ENST00000531068 EPB41L2O43491 1005 aaKnown RBP12.76□□□□□ -0.37
CAPN1-221ENST00000531068 CABYRO75952 493 aa12.76□□□□□ -0.37
CAPN1-221ENST00000531068 KIF5BP33176 963 aa12.76□□□□□ -0.37
CAPN1-221ENST00000531068 TLE2Q04725 743 aa12.76□□□□□ -0.37
CAPN1-221ENST00000531068 GRM4Q14833 912 aa12.76□□□□□ -0.37
CAPN1-221ENST00000531068 SLC30A10Q6XR72 485 aa12.76□□□□□ -0.37
CAPN1-221ENST00000531068 STOX1Q6ZVD7 989 aa12.76□□□□□ -0.37
CAPN1-221ENST00000531068 FBXO16Q8IX29 292 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-221ENST00000531068 STAG2Q8N3U4 1231 aa12.76□□□□□ -0.37
CAPN1-221ENST00000531068 SAMD3Q8N6K7 520 aa12.76□□□□□ -0.37
CAPN1-221ENST00000531068 TMEM87BQ96K49 555 aa12.76□□□□□ -0.37
CAPN1-221ENST00000531068 PURBQ96QR8 312 aaKnown RBP12.76□□□□□ -0.37
CAPN1-221ENST00000531068 MAP3K14Q99558 947 aa12.76□□□□□ -0.37
CAPN1-221ENST00000531068 KIF2CQ99661 725 aa12.76□□□□□ -0.37
CAPN1-221ENST00000531068 SEZ6LQ9BYH1 1024 aa12.76□□□□□ -0.37
CAPN1-221ENST00000531068 MAP3K20Q9NYL2 800 aaKnown RBP12.76□□□□□ -0.37
CAPN1-221ENST00000531068 GNEQ9Y223 722 aaKnown RBP12.76□□□□□ -0.37
CAPN1-221ENST00000531068 ASTN1O14525 1302 aa12.76□□□□□ -0.37
CAPN1-221ENST00000531068 RBM47A0AV96 593 aaKnown RBP12.75□□□□□ -0.37
CAPN1-221ENST00000531068 SLC27A2O14975 620 aa12.75□□□□□ -0.37
CAPN1-221ENST00000531068 PRC1O43663 620 aa12.75□□□□□ -0.37
CAPN1-221ENST00000531068 ASGR1P07306 291 aa12.75□□□□□ -0.37
CAPN1-221ENST00000531068 SMPD1P17405 629 aa12.75□□□□□ -0.37
CAPN1-221ENST00000531068 TROAPQ12815 778 aa12.75□□□□□ -0.37
CAPN1-221ENST00000531068 NECTIN1Q15223 517 aa12.75□□□□□ -0.37
CAPN1-221ENST00000531068 DUSP28Q4G0W2 176 aa12.75□□□□□ -0.37
CAPN1-221ENST00000531068 BRDTQ58F21 947 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-221ENST00000531068 CREB3L3Q68CJ9 461 aa12.75□□□□□ -0.37
CAPN1-221ENST00000531068 MROH7Q68CQ1 1323 aa12.75□□□□□ -0.37
CAPN1-221ENST00000531068 NFXL1Q6ZNB6 911 aa12.75□□□□□ -0.37
CAPN1-221ENST00000531068 CHST3Q7LGC8 479 aa12.75□□□□□ -0.37
CAPN1-221ENST00000531068 ANKRD33Q7Z3H0 272 aa12.75□□□□□ -0.37
CAPN1-221ENST00000531068 TLK2Q86UE8 772 aa12.75□□□□□ -0.37
CAPN1-221ENST00000531068 MB21D2Q8IYB1 491 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-221ENST00000531068 CTCFLQ8NI51 663 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-221ENST00000531068 NSUN6Q8TEA1 469 aaKnown RBP12.75□□□□□ -0.37
CAPN1-221ENST00000531068 MTMR8Q96EF0 704 aa12.75□□□□□ -0.37
CAPN1-221ENST00000531068 IWS1Q96ST2 819 aa12.75□□□□□ -0.37
CAPN1-221ENST00000531068 LZTS2Q9BRK4 669 aa12.75□□□□□ -0.37
CAPN1-221ENST00000531068 WDR11Q9BZH6 1224 aa12.75□□□□□ -0.37
CAPN1-221ENST00000531068 PRDM5Q9NQX1 630 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-221ENST00000531068 PDGFCQ9NRA1 345 aa12.75□□□□□ -0.37
CAPN1-221ENST00000531068 PCDHA1Q9Y5I3 950 aa12.75□□□□□ -0.37
CAPN1-221ENST00000531068 TAF6LQ9Y6J9 622 aa12.75□□□□□ -0.37
CAPN1-221ENST00000531068 PNMA6FA0A0J9YX94 578 aa12.74□□□□□ -0.37
CAPN1-221ENST00000531068 A0A0U1RQG5 324 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-221ENST00000531068 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-221ENST00000531068 CCDC69A6NI79 296 aa12.74□□□□□ -0.37
CAPN1-221ENST00000531068 NKRFO15226 690 aaKnown RBP eCLIP12.74□□□□□ -0.37
CAPN1-221ENST00000531068 ADCY6O43306 1168 aa12.74□□□□□ -0.37
CAPN1-221ENST00000531068 EIF5BO60841 1220 aaKnown RBP12.74□□□□□ -0.37
CAPN1-221ENST00000531068 DDAH1O94760 285 aa12.74□□□□□ -0.37
CAPN1-221ENST00000531068 CLTBP09497 229 aa12.74□□□□□ -0.37
CAPN1-221ENST00000531068 EDNRBP24530 442 aa12.74□□□□□ -0.37
CAPN1-221ENST00000531068 SMARCA1P28370 1054 aa12.74□□□□□ -0.37
CAPN1-221ENST00000531068 LIFRP42702 1097 aa12.74□□□□□ -0.37
CAPN1-221ENST00000531068 GNAQP50148 359 aa12.74□□□□□ -0.37
CAPN1-221ENST00000531068 ANTXR2P58335 489 aa12.74□□□□□ -0.37
CAPN1-221ENST00000531068 MDM2Q00987 491 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-221ENST00000531068 FSCN1Q16658 493 aaKnown RBP12.74□□□□□ -0.37
CAPN1-221ENST00000531068 TDHQ8IZJ6 230 aa12.74□□□□□ -0.37
CAPN1-221ENST00000531068 SYTL5Q8TDW5 730 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-221ENST00000531068 SCFD2Q8WU76 684 aa12.74□□□□□ -0.37
CAPN1-221ENST00000531068 RIOX1Q9H6W3 641 aa12.74□□□□□ -0.37
CAPN1-221ENST00000531068 TMEM39AQ9NV64 488 aa12.74□□□□□ -0.37
CAPN1-221ENST00000531068 MYADML2A6NDP7 307 aa12.73□□□□□ -0.37
CAPN1-221ENST00000531068 ARVCFO00192 962 aa12.73□□□□□ -0.37
CAPN1-221ENST00000531068 CTAGE5O15320 804 aa12.73□□□□□ -0.37
CAPN1-221ENST00000531068 PQBP1O60828 265 aaKnown RBP12.73□□□□□ -0.37
CAPN1-221ENST00000531068 CALM1P0DP23 149 aa12.73□□□□□ -0.37
CAPN1-221ENST00000531068 CALM2P0DP24 149 aa12.73□□□□□ -0.37
CAPN1-221ENST00000531068 CALM3P0DP25 149 aa12.73□□□□□ -0.37
CAPN1-221ENST00000531068 CDK7P50613 346 aa12.73□□□□□ -0.37
CAPN1-221ENST00000531068 BEX3Q00994 111 aa12.73□□□□□ -0.37
CAPN1-221ENST00000531068 STXBP2Q15833 593 aa12.73□□□□□ -0.37
CAPN1-221ENST00000531068 LRIT3Q3SXY7 679 aa12.73□□□□□ -0.37
CAPN1-221ENST00000531068 ARHGEF16Q5VV41 709 aa12.73□□□□□ -0.37
CAPN1-221ENST00000531068 TBC1D5Q92609 795 aa12.73□□□□□ -0.37
CAPN1-221ENST00000531068 RMDN3Q96TC7 470 aa12.73□□□□□ -0.37
CAPN1-221ENST00000531068 LY9Q9HBG7 655 aa12.73□□□□□ -0.37
CAPN1-221ENST00000531068 SENP2Q9HC62 589 aa12.73□□□□□ -0.37
CAPN1-221ENST00000531068 PDLIM7Q9NR12 457 aa12.73□□□□□ -0.37
CAPN1-221ENST00000531068 TRIM43BA6NCK2 446 aa12.72□□□□□ -0.37
CAPN1-221ENST00000531068 KIAA0355O15063 1070 aa12.72□□□□□ -0.37
CAPN1-221ENST00000531068 TLR3O15455 904 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms