RNA–Protein interactions for RNA: ENST00000530720.1

CTNND1-226, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-226ENST00000530720 COL8A1P27658 744 aa5.53□□□□□ -1.52
CTNND1-226ENST00000530720 CCND3P30281 292 aaPredicted RBP5.53□□□□□ -1.52
CTNND1-226ENST00000530720 GUCY1A2P33402 732 aa5.53□□□□□ -1.52
CTNND1-226ENST00000530720 SHMT1P34896 483 aa5.53□□□□□ -1.52
CTNND1-226ENST00000530720 MAGEA10P43363 369 aaPredicted RBP5.53□□□□□ -1.52
CTNND1-226ENST00000530720 ERVK-24P63145 666 aa5.53□□□□□ -1.52
CTNND1-226ENST00000530720 ATP8B2P98198 1209 aa5.53□□□□□ -1.52
CTNND1-226ENST00000530720 CACNB2Q08289 660 aaPredicted RBP5.53□□□□□ -1.52
CTNND1-226ENST00000530720 USP4Q13107 963 aa5.53□□□□□ -1.52
CTNND1-226ENST00000530720 G3BP1Q13283 466 aaKnown RBP eCLIP5.53□□□□□ -1.522e-8■□□□□ 9.6
CTNND1-226ENST00000530720 PABPC4Q13310 644 aaKnown RBP eCLIP5.53□□□□□ -1.52
CTNND1-226ENST00000530720 TSGA10IPQ3SY00 556 aa5.53□□□□□ -1.52
CTNND1-226ENST00000530720 GPR142Q7Z601 462 aa5.53□□□□□ -1.52
CTNND1-226ENST00000530720 FOXP4Q8IVH2 680 aaPredicted RBP5.53□□□□□ -1.52
CTNND1-226ENST00000530720 GPRC5AQ8NFJ5 357 aa5.53□□□□□ -1.52
CTNND1-226ENST00000530720 ACER1Q8TDN7 264 aa5.53□□□□□ -1.52
CTNND1-226ENST00000530720 SOCS4Q8WXH5 440 aa5.53□□□□□ -1.52
CTNND1-226ENST00000530720 RIOK1Q9BRS2 568 aaKnown RBP5.53□□□□□ -1.52
CTNND1-226ENST00000530720 EHD4Q9H223 541 aa5.53□□□□□ -1.52
CTNND1-226ENST00000530720 CRISPLD1Q9H336 500 aa5.53□□□□□ -1.52
CTNND1-226ENST00000530720 C11orf49Q9H6J7 331 aa5.53□□□□□ -1.52
CTNND1-226ENST00000530720 AS3MTQ9HBK9 375 aa5.53□□□□□ -1.52
CTNND1-226ENST00000530720 ETNK1Q9HBU6 452 aa5.53□□□□□ -1.52
CTNND1-226ENST00000530720 SAP30BPQ9UHR5 308 aaKnown RBP5.53□□□□□ -1.52
CTNND1-226ENST00000530720 UNC80Q8N2C7 3258 aa5.53□□□□□ -1.52
CTNND1-226ENST00000530720 LAMA2P24043 3122 aaKnown RBP5.52□□□□□ -1.53
CTNND1-226ENST00000530720 USP17L10C9JJH3 530 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 SMIM22K7EJ46 135 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 BNIP3LO60238 219 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 IGSF3O75054 1194 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 SURF6O75683 361 aaKnown RBP5.52□□□□□ -1.53
CTNND1-226ENST00000530720 BAG3O95817 575 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 GH2P01242 217 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 HOXC6P09630 235 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 HOXB4P17483 251 aaPredicted RBP5.52□□□□□ -1.53
CTNND1-226ENST00000530720 VCAM1P19320 739 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 FGFR3P22607 806 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 PLCD1P51178 756 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 IRX3P78415 501 aaPredicted RBP5.52□□□□□ -1.53
CTNND1-226ENST00000530720 GABPAQ06546 454 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 LRRC26Q2I0M4 334 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 LRIT3Q3SXY7 679 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 KIAA1755Q5JYT7 1200 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 TTC39AQ5SRH9 613 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 XP32Q5T750 250 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 GORABQ5T7V8 394 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 ZKSCAN2Q63HK3 967 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 LINC00114Q6XXX2 140 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 LBX2Q6XYB7 198 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 SLCO4C1Q6ZQN7 724 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 Q7L0L9 218 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 MIGA1Q8NAN2 632 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 TRPV1Q8NER1 839 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 FRAT1Q92837 279 aaPredicted RBP5.52□□□□□ -1.53
CTNND1-226ENST00000530720 ABHD17AQ96GS6 310 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 APBA2Q99767 749 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 KIAA1683Q9H0B3 1180 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 CCDC8Q9H0W5 538 aaPredicted RBP5.52□□□□□ -1.53
CTNND1-226ENST00000530720 GINM1Q9NU53 330 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 TMOD4Q9NZQ9 345 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 BTBD7Q9P203 1132 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 DOLKQ9UPQ8 538 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 CDH23Q9H251 3354 aa5.52□□□□□ -1.53
CTNND1-226ENST00000530720 GREB1LQ9C091 1923 aaPredicted RBP5.51□□□□□ -1.53
CTNND1-226ENST00000530720 A0A1W2PRG0 241 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 TCRBV5S4A2TA0A5A2 114 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 K7ELQ4 463 aaPredicted RBP5.51□□□□□ -1.53
CTNND1-226ENST00000530720 IPO8O15397 1037 aaKnown RBP5.51□□□□□ -1.53
CTNND1-226ENST00000530720 IDH1O75874 414 aaKnown RBP5.51□□□□□ -1.53
CTNND1-226ENST00000530720 STAU1O95793 577 aaKnown RBP5.51□□□□□ -1.53
CTNND1-226ENST00000530720 ZKSCAN1P17029 563 aaPredicted RBP5.51□□□□□ -1.53
CTNND1-226ENST00000530720 CYP7A1P22680 504 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 MAPK4P31152 587 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 RGS2P41220 211 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 CTBSQ01459 385 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 GRB14Q14449 540 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 TLR1Q15399 786 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 ZYXQ15942 572 aaKnown RBP5.51□□□□□ -1.53
CTNND1-226ENST00000530720 CCDC158Q5M9N0 1113 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 CEP85Q6P2H3 762 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 USP17L2Q6R6M4 530 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 CATSPERGQ6ZRH7 1159 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 PLEKHH3Q7Z736 793 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 SIAH1Q8IUQ4 282 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 TDHQ8IZJ6 230 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 CRACR2BQ8N4Y2 399 aaPredicted RBP5.51□□□□□ -1.53
CTNND1-226ENST00000530720 MAGEB6Q8N7X4 407 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 NPLOC4Q8TAT6 608 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 PAGR1Q9BTK6 254 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 MTMR10Q9NXD2 777 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 SERPINB13Q9UIV8 391 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 RABGAP1Q9Y3P9 1069 aa5.51□□□□□ -1.53
CTNND1-226ENST00000530720 SPTBN5Q9NRC6 3674 aaKnown RBP5.51□□□□□ -1.53
CTNND1-226ENST00000530720 USP17L15C9J2P7 530 aa5.5□□□□□ -1.53
CTNND1-226ENST00000530720 USP17L13C9JLJ4 530 aa5.5□□□□□ -1.53
CTNND1-226ENST00000530720 USP17L11C9JVI0 530 aa5.5□□□□□ -1.53
CTNND1-226ENST00000530720 USP17L18D6R9N7 530 aa5.5□□□□□ -1.53
CTNND1-226ENST00000530720 USP17L22D6RA61 530 aa5.5□□□□□ -1.53
CTNND1-226ENST00000530720 USP17L17D6RBQ6 530 aa5.5□□□□□ -1.53
CTNND1-226ENST00000530720 USP17L19D6RCP7 530 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms