RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 PPM1EQ8WY54 764 aa17.62■□□□□ 0.41
CAPN1-219ENST00000530495 WDR11Q9BZH6 1224 aa17.62■□□□□ 0.41
CAPN1-219ENST00000530495 ALDH8A1Q9H2A2 487 aaPredicted RBP17.62■□□□□ 0.41
CAPN1-219ENST00000530495 NKX2-4Q9H2Z4 354 aa17.62■□□□□ 0.41
CAPN1-219ENST00000530495 HELLSQ9NRZ9 838 aa17.62■□□□□ 0.41
CAPN1-219ENST00000530495 TCP11L1Q9NUJ3 509 aa17.62■□□□□ 0.41
CAPN1-219ENST00000530495 MYO9BQ13459 2157 aa17.62■□□□□ 0.41
CAPN1-219ENST00000530495 SPTBN5Q9NRC6 3674 aaKnown RBP17.61■□□□□ 0.41
CAPN1-219ENST00000530495 RBM47A0AV96 593 aaKnown RBP17.61■□□□□ 0.41
CAPN1-219ENST00000530495 FGAP02671 866 aa17.61■□□□□ 0.41
CAPN1-219ENST00000530495 SUPT20HL2P0C7V6 817 aa17.61■□□□□ 0.41
CAPN1-219ENST00000530495 TOP1P11387 765 aaKnown RBP17.61■□□□□ 0.41
CAPN1-219ENST00000530495 SYDE2Q5VT97 1194 aa17.61■□□□□ 0.41
CAPN1-219ENST00000530495 VWCEQ96DN2 955 aa17.61■□□□□ 0.41
CAPN1-219ENST00000530495 TMEM47Q9BQJ4 181 aa17.61■□□□□ 0.41
CAPN1-219ENST00000530495 POLR3EQ9NVU0 708 aa17.61■□□□□ 0.41
CAPN1-219ENST00000530495 YBX2Q9Y2T7 364 aaKnown RBP17.61■□□□□ 0.41
CAPN1-219ENST00000530495 TNFRSF10AO00220 468 aa17.6■□□□□ 0.41
CAPN1-219ENST00000530495 NFIBO00712 420 aa17.6■□□□□ 0.41
CAPN1-219ENST00000530495 PURAQ00577 322 aaKnown RBP17.6■□□□□ 0.41
CAPN1-219ENST00000530495 TICAM2Q86XR7 235 aa17.6■□□□□ 0.41
CAPN1-219ENST00000530495 CLEC4DQ8WXI8 215 aa17.6■□□□□ 0.41
CAPN1-219ENST00000530495 ASB2Q96Q27 587 aa17.6■□□□□ 0.41
CAPN1-219ENST00000530495 PNMA2Q9UL42 364 aa17.6■□□□□ 0.41
CAPN1-219ENST00000530495 SLC4A7Q9Y6M7 1214 aa17.6■□□□□ 0.41
CAPN1-219ENST00000530495 PTPDC1A2A3K4 754 aa17.59■□□□□ 0.41
CAPN1-219ENST00000530495 IGFBP4P22692 258 aa17.59■□□□□ 0.41
CAPN1-219ENST00000530495 CPT1AP50416 773 aa17.59■□□□□ 0.41
CAPN1-219ENST00000530495 MCMDC2Q4G0Z9 681 aa17.59■□□□□ 0.41
CAPN1-219ENST00000530495 ANKRD45Q5TZF3 282 aa17.59■□□□□ 0.41
CAPN1-219ENST00000530495 SCLYQ96I15 445 aa17.59■□□□□ 0.41
CAPN1-219ENST00000530495 TTC14Q96N46 770 aa17.59■□□□□ 0.41
CAPN1-219ENST00000530495 GPCPD1Q9NPB8 672 aa17.59■□□□□ 0.41
CAPN1-219ENST00000530495 TOMM22Q9NS69 142 aa17.59■□□□□ 0.41
CAPN1-219ENST00000530495 TRMT13Q9NUP7 481 aaKnown RBP17.59■□□□□ 0.41
CAPN1-219ENST00000530495 PCDHA11Q9Y5I1 949 aa17.59■□□□□ 0.41
CAPN1-219ENST00000530495 FRMPD2Q68DX3 1309 aaPredicted RBP17.58■□□□□ 0.4
CAPN1-219ENST00000530495 PFKMP08237 780 aa17.58■□□□□ 0.4
CAPN1-219ENST00000530495 PDHBP11177 359 aa17.58■□□□□ 0.4
CAPN1-219ENST00000530495 RABGGTBP53611 331 aa17.58■□□□□ 0.4
CAPN1-219ENST00000530495 CCDC85BQ15834 202 aaPredicted RBP17.58■□□□□ 0.4
CAPN1-219ENST00000530495 RRP12Q5JTH9 1297 aaKnown RBP17.58■□□□□ 0.4
CAPN1-219ENST00000530495 RNF207Q6ZRF8 634 aa17.58■□□□□ 0.4
CAPN1-219ENST00000530495 THEGQ9P2T0 379 aa17.58■□□□□ 0.4
CAPN1-219ENST00000530495 ZBTB47Q9UFB7 747 aaPredicted RBP17.58■□□□□ 0.4
CAPN1-219ENST00000530495 TTC28Q96AY4 2481 aa17.57■□□□□ 0.4
CAPN1-219ENST00000530495 TNKSO95271 1327 aa17.57■□□□□ 0.4
CAPN1-219ENST00000530495 NKRFO15226 690 aaKnown RBP eCLIP17.57■□□□□ 0.4
CAPN1-219ENST00000530495 MYL3P08590 195 aa17.57■□□□□ 0.4
CAPN1-219ENST00000530495 HSPD1P10809 573 aaKnown RBP17.57■□□□□ 0.4
CAPN1-219ENST00000530495 CYP2C9P11712 490 aa17.57■□□□□ 0.4
CAPN1-219ENST00000530495 CALML3P27482 149 aa17.57■□□□□ 0.4
CAPN1-219ENST00000530495 PDE1AP54750 535 aa17.57■□□□□ 0.4
CAPN1-219ENST00000530495 MRPS5P82675 430 aaKnown RBP17.57■□□□□ 0.4
CAPN1-219ENST00000530495 SLC30A10Q6XR72 485 aa17.57■□□□□ 0.4
CAPN1-219ENST00000530495 FAM227BQ96M60 508 aa17.57■□□□□ 0.4
CAPN1-219ENST00000530495 MTG1Q9BT17 334 aaPredicted RBP17.57■□□□□ 0.4
CAPN1-219ENST00000530495 GPHNQ9NQX3 736 aaPredicted RBP17.57■□□□□ 0.4
CAPN1-219ENST00000530495 ZMYM6O95789 1325 aa17.56■□□□□ 0.4
CAPN1-219ENST00000530495 KPNA6O60684 536 aa17.56■□□□□ 0.4
CAPN1-219ENST00000530495 SNHG28P0DPA3 235 aa17.56■□□□□ 0.4
CAPN1-219ENST00000530495 PCP11498 1178 aaKnown RBP17.56■□□□□ 0.4
CAPN1-219ENST00000530495 MYOGP15173 224 aa17.56■□□□□ 0.4
CAPN1-219ENST00000530495 ATP2A2P16615 1042 aaKnown RBP17.56■□□□□ 0.4
CAPN1-219ENST00000530495 EDNRBP24530 442 aa17.56■□□□□ 0.4
CAPN1-219ENST00000530495 PDE4DQ08499 809 aa17.56■□□□□ 0.4
CAPN1-219ENST00000530495 ZNF543Q08ER8 600 aa17.56■□□□□ 0.4
CAPN1-219ENST00000530495 BRDTQ58F21 947 aaPredicted RBP17.56■□□□□ 0.4
CAPN1-219ENST00000530495 DNERQ8NFT8 737 aa17.56■□□□□ 0.4
CAPN1-219ENST00000530495 OR6J1Q8NGC5 347 aa17.56■□□□□ 0.4
CAPN1-219ENST00000530495 MPHOSPH6Q99547 160 aaKnown RBP17.56■□□□□ 0.4
CAPN1-219ENST00000530495 CHD7Q9P2D1 2997 aa17.55■□□□□ 0.4
CAPN1-219ENST00000530495 SCN5AQ14524 2016 aa17.55■□□□□ 0.4
CAPN1-219ENST00000530495 SCN10AQ9Y5Y9 1956 aa17.55■□□□□ 0.4
CAPN1-219ENST00000530495 WDR19Q8NEZ3 1342 aa17.55■□□□□ 0.4
CAPN1-219ENST00000530495 A0A0D9SFI3 127 aa17.55■□□□□ 0.4
CAPN1-219ENST00000530495 A6NJR5 290 aa17.55■□□□□ 0.4
CAPN1-219ENST00000530495 ZBBXA8MT70 800 aa17.55■□□□□ 0.4
CAPN1-219ENST00000530495 RPS6P62753 249 aaKnown RBP17.55■□□□□ 0.4
CAPN1-219ENST00000530495 TTLL4Q14679 1199 aa17.55■□□□□ 0.4
CAPN1-219ENST00000530495 NBPF20Q3BBV1 942 aa17.55■□□□□ 0.4
CAPN1-219ENST00000530495 PPP2R2DQ66LE6 453 aa17.55■□□□□ 0.4
CAPN1-219ENST00000530495 NFRKBQ6P4R8 1299 aa17.55■□□□□ 0.4
CAPN1-219ENST00000530495 RGS22Q8NE09 1264 aa17.55■□□□□ 0.4
CAPN1-219ENST00000530495 SCFD2Q8WU76 684 aa17.55■□□□□ 0.4
CAPN1-219ENST00000530495 RAD50Q92878 1312 aa17.54■□□□□ 0.4
CAPN1-219ENST00000530495 B4DLN1 442 aa17.54■□□□□ 0.4
CAPN1-219ENST00000530495 RFC2P35250 354 aa17.54■□□□□ 0.4
CAPN1-219ENST00000530495 MRPL12P52815 198 aaKnown RBP17.54■□□□□ 0.4
CAPN1-219ENST00000530495 PTPN11Q06124 597 aaPredicted RBP17.54■□□□□ 0.4
CAPN1-219ENST00000530495 PPP2R5BQ15173 497 aa17.54■□□□□ 0.4
CAPN1-219ENST00000530495 MFSD6Q6ZSS7 791 aa17.54■□□□□ 0.4
CAPN1-219ENST00000530495 DEFB128Q7Z7B8 93 aa17.54■□□□□ 0.4
CAPN1-219ENST00000530495 PITPNM1O00562 1244 aa17.53■□□□□ 0.4
CAPN1-219ENST00000530495 TXNP10599 105 aaKnown RBP17.53■□□□□ 0.4
CAPN1-219ENST00000530495 ACTN1P12814 892 aa17.53■□□□□ 0.4
CAPN1-219ENST00000530495 POU3F3P20264 500 aaPredicted RBP17.53■□□□□ 0.4
CAPN1-219ENST00000530495 HAND2P61296 217 aa17.53■□□□□ 0.4
CAPN1-219ENST00000530495 HDAC1Q13547 482 aaPredicted RBP17.53■□□□□ 0.4
CAPN1-219ENST00000530495 FAM47CQ5HY64 1035 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms