RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 HHIPL1Q96JK4 782 aa8.59□□□□□ -1.03
VPS26B-205ENST00000530402 MMP19Q99542 508 aa8.59□□□□□ -1.03
VPS26B-205ENST00000530402 MRPL4Q9BYD3 311 aaKnown RBP8.59□□□□□ -1.03
VPS26B-205ENST00000530402 KIR2DL1P43626 348 aaPredicted RBP8.58□□□□□ -1.04
VPS26B-205ENST00000530402 KIR2DL2P43627 348 aaPredicted RBP8.58□□□□□ -1.04
VPS26B-205ENST00000530402 CHRNEQ04844 493 aa8.58□□□□□ -1.04
VPS26B-205ENST00000530402 KCNT2Q6UVM3 1135 aa8.58□□□□□ -1.04
VPS26B-205ENST00000530402 KIAA0907Q7Z7F0 614 aaPredicted RBP8.58□□□□□ -1.04
VPS26B-205ENST00000530402 CCDC103Q8IW40 242 aa8.58□□□□□ -1.04
VPS26B-205ENST00000530402 TMEM52Q8NDY8 209 aa8.58□□□□□ -1.04
VPS26B-205ENST00000530402 PDZD8Q8NEN9 1154 aa8.58□□□□□ -1.04
VPS26B-205ENST00000530402 LINC01599Q8WXQ3 324 aa8.58□□□□□ -1.04
VPS26B-205ENST00000530402 CHAMP1Q96JM3 812 aa8.58□□□□□ -1.04
VPS26B-205ENST00000530402 G6PC3Q9BUM1 346 aa8.58□□□□□ -1.04
VPS26B-205ENST00000530402 PHF20Q9BVI0 1012 aa8.58□□□□□ -1.04
VPS26B-205ENST00000530402 EBF1Q9UH73 591 aa8.58□□□□□ -1.04
VPS26B-205ENST00000530402 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.58□□□□□ -1.04
VPS26B-205ENST00000530402 TRAF6Q9Y4K3 522 aa8.58□□□□□ -1.04
VPS26B-205ENST00000530402 FADS2P1A8MWK0 482 aa8.57□□□□□ -1.04
VPS26B-205ENST00000530402 MYO1BO43795 1136 aa8.57□□□□□ -1.04
VPS26B-205ENST00000530402 RAC2P15153 192 aa8.57□□□□□ -1.04
VPS26B-205ENST00000530402 MAMDC2Q7Z304 686 aaPredicted RBP8.57□□□□□ -1.04
VPS26B-205ENST00000530402 RC3H2Q9HBD1 1191 aaKnown RBP8.57□□□□□ -1.04
VPS26B-205ENST00000530402 MBNL3Q9NUK0 354 aaKnown RBP8.57□□□□□ -1.04
VPS26B-205ENST00000530402 BTG4Q9NY30 223 aa8.57□□□□□ -1.04
VPS26B-205ENST00000530402 ADAMTS6Q9UKP5 1117 aa8.57□□□□□ -1.04
VPS26B-205ENST00000530402 PCDHA2Q9Y5H9 948 aa8.57□□□□□ -1.04
VPS26B-205ENST00000530402 A0A1W2PQ45 241 aaPredicted RBP8.56□□□□□ -1.04
VPS26B-205ENST00000530402 A0A1W2PQY0 241 aa8.56□□□□□ -1.04
VPS26B-205ENST00000530402 FITM1A5D6W6 292 aa8.56□□□□□ -1.04
VPS26B-205ENST00000530402 AQP7O14520 342 aa8.56□□□□□ -1.04
VPS26B-205ENST00000530402 NPHS1O60500 1241 aa8.56□□□□□ -1.04
VPS26B-205ENST00000530402 EFCAB14O75071 495 aa8.56□□□□□ -1.04
VPS26B-205ENST00000530402 RNASE1P07998 156 aaKnown RBP8.56□□□□□ -1.04
VPS26B-205ENST00000530402 C6orf222P0C671 652 aaPredicted RBP8.56□□□□□ -1.04
VPS26B-205ENST00000530402 LCP1P13796 627 aa8.56□□□□□ -1.04
VPS26B-205ENST00000530402 GYS2P54840 703 aa8.56□□□□□ -1.04
VPS26B-205ENST00000530402 PABPC4Q13310 644 aaKnown RBP eCLIP8.56□□□□□ -1.04
VPS26B-205ENST00000530402 INF2Q27J81 1249 aa8.56□□□□□ -1.04
VPS26B-205ENST00000530402 ZNF792Q3KQV3 632 aa8.56□□□□□ -1.04
VPS26B-205ENST00000530402 FNDC3BQ53EP0 1204 aaKnown RBP8.56□□□□□ -1.04
VPS26B-205ENST00000530402 ARTNQ5T4W7 220 aa8.56□□□□□ -1.04
VPS26B-205ENST00000530402 STYK1Q6J9G0 422 aa8.56□□□□□ -1.04
VPS26B-205ENST00000530402 RSPO2Q6UXX9 243 aaPredicted RBP8.56□□□□□ -1.04
VPS26B-205ENST00000530402 MTDHQ86UE4 582 aaKnown RBP8.56□□□□□ -1.04
VPS26B-205ENST00000530402 IFNL3Q8IZI9 196 aa8.56□□□□□ -1.04
VPS26B-205ENST00000530402 SLC52A2Q9HAB3 445 aa8.56□□□□□ -1.04
VPS26B-205ENST00000530402 GPR27Q9NS67 375 aa8.56□□□□□ -1.04
VPS26B-205ENST00000530402 TAF6LQ9Y6J9 622 aa8.56□□□□□ -1.04
VPS26B-205ENST00000530402 C7orf72A4D263 438 aa8.55□□□□□ -1.04
VPS26B-205ENST00000530402 WTIPA6NIX2 430 aaPredicted RBP8.55□□□□□ -1.04
VPS26B-205ENST00000530402 GDNFP39905 211 aa8.55□□□□□ -1.04
VPS26B-205ENST00000530402 MBLAC2Q68D91 279 aa8.55□□□□□ -1.04
VPS26B-205ENST00000530402 RCBTB1Q8NDN9 531 aa8.55□□□□□ -1.04
VPS26B-205ENST00000530402 JMJD8Q96S16 334 aa8.55□□□□□ -1.04
VPS26B-205ENST00000530402 ZFYVE21Q9BQ24 234 aa8.55□□□□□ -1.04
VPS26B-205ENST00000530402 ZFP64Q9NPA5 681 aa8.55□□□□□ -1.04
VPS26B-205ENST00000530402 PLAAQ9Y263 795 aa8.55□□□□□ -1.04
VPS26B-205ENST00000530402 TIMM13Q9Y5L4 95 aaPredicted RBP8.55□□□□□ -1.04
VPS26B-205ENST00000530402 SBNO2Q9Y2G9 1366 aa8.55□□□□□ -1.04
VPS26B-205ENST00000530402 A0A1W2PQJ5 194 aa8.54□□□□□ -1.04
VPS26B-205ENST00000530402 ARNTLO00327 626 aa8.54□□□□□ -1.04
VPS26B-205ENST00000530402 GP2P55259 537 aaKnown RBP8.54□□□□□ -1.04
VPS26B-205ENST00000530402 ERVFC1P60507 584 aa8.54□□□□□ -1.04
VPS26B-205ENST00000530402 GPR85P60893 370 aa8.54□□□□□ -1.04
VPS26B-205ENST00000530402 RPL11P62913 178 aaKnown RBP8.54□□□□□ -1.04
VPS26B-205ENST00000530402 GUCY1A3Q02108 690 aa8.54□□□□□ -1.04
VPS26B-205ENST00000530402 HSF5Q4G112 596 aaPredicted RBP8.54□□□□□ -1.04
VPS26B-205ENST00000530402 GALNT18Q6P9A2 607 aa8.54□□□□□ -1.04
VPS26B-205ENST00000530402 ZNF662Q6ZS27 426 aa8.54□□□□□ -1.04
VPS26B-205ENST00000530402 SLCO6A1Q86UG4 719 aa8.54□□□□□ -1.04
VPS26B-205ENST00000530402 DHX37Q8IY37 1157 aaKnown RBP8.54□□□□□ -1.04
VPS26B-205ENST00000530402 ABI1Q8IZP0 508 aa8.54□□□□□ -1.04
VPS26B-205ENST00000530402 SLC7A14Q8TBB6 771 aa8.54□□□□□ -1.04
VPS26B-205ENST00000530402 MAGEB10Q96LZ2 347 aaPredicted RBP8.54□□□□□ -1.04
VPS26B-205ENST00000530402 CLUHP3Q96NS8 147 aa8.54□□□□□ -1.04
VPS26B-205ENST00000530402 C19orf44Q9H6X5 657 aa8.54□□□□□ -1.04
VPS26B-205ENST00000530402 NPFFR2Q9Y5X5 522 aa8.54□□□□□ -1.04
VPS26B-205ENST00000530402 ASXL2Q76L83 1435 aa8.54□□□□□ -1.04
VPS26B-205ENST00000530402 IRS4O14654 1257 aaPredicted RBP8.53□□□□□ -1.04
VPS26B-205ENST00000530402 RFPL3O75679 317 aa8.53□□□□□ -1.04
VPS26B-205ENST00000530402 NAT1P18440 290 aa8.53□□□□□ -1.04
VPS26B-205ENST00000530402 TESK1Q15569 626 aa8.53□□□□□ -1.04
VPS26B-205ENST00000530402 DALRD3Q5D0E6 543 aaKnown RBP8.53□□□□□ -1.04
VPS26B-205ENST00000530402 TRIM61Q5EBN2 209 aa8.53□□□□□ -1.04
VPS26B-205ENST00000530402 BRAPQ7Z569 592 aa8.53□□□□□ -1.04
VPS26B-205ENST00000530402 NIM1KQ8IY84 436 aa8.53□□□□□ -1.04
VPS26B-205ENST00000530402 NUP43Q8NFH3 380 aa8.53□□□□□ -1.04
VPS26B-205ENST00000530402 USP33Q8TEY7 942 aa8.53□□□□□ -1.04
VPS26B-205ENST00000530402 MYLIPQ8WY64 445 aa8.53□□□□□ -1.04
VPS26B-205ENST00000530402 NINJ1Q92982 152 aa8.53□□□□□ -1.04
VPS26B-205ENST00000530402 ALG1Q9BT22 464 aa8.53□□□□□ -1.04
VPS26B-205ENST00000530402 IMPACTQ9P2X3 320 aa8.53□□□□□ -1.04
VPS26B-205ENST00000530402 GULP1Q9UBP9 304 aa8.53□□□□□ -1.04
VPS26B-205ENST00000530402 GPR160Q9UJ42 338 aa8.53□□□□□ -1.04
VPS26B-205ENST00000530402 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.52□□□□□ -1.05
VPS26B-205ENST00000530402 MSCO60682 206 aa8.52□□□□□ -1.05
VPS26B-205ENST00000530402 CRTAMO95727 393 aa8.52□□□□□ -1.05
VPS26B-205ENST00000530402 PRKCAP17252 672 aa8.52□□□□□ -1.05
VPS26B-205ENST00000530402 TRHRP34981 398 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms