RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 NTSR2O95665 410 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 EIF4A3P38919 411 aaKnown RBP13.68□□□□□ -0.22
SCN3B-206ENST00000530277 GABPB1Q06547 395 aaPredicted RBP13.68□□□□□ -0.22
SCN3B-206ENST00000530277 ASIC2Q16515 512 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 KCTD19Q17RG1 926 aaPredicted RBP13.68□□□□□ -0.22
SCN3B-206ENST00000530277 SFMBT2Q5VUG0 894 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 NOX5Q96PH1 765 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 BRIP1Q9BX63 1249 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 CD209Q9NNX6 404 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 MYO1AQ9UBC5 1043 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 ADGRG1Q9Y653 693 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 RICTORQ6R327 1708 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 EXOC3O60645 756 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 ALX1Q15699 326 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 TMC4Q7Z404 712 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 PAIP2Q9BPZ3 127 aaKnown RBP13.68□□□□□ -0.22
SCN3B-206ENST00000530277 ADAMTS1Q9UHI8 967 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 GJA3Q9Y6H8 435 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 DLG5Q8TDM6 1919 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 GOLGA6CA6NDK9 693 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 GOLGA6DP0CG33 693 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 NTRK3Q16288 839 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 U2AF1L4Q8WU68 220 aaKnown RBP13.68□□□□□ -0.22
SCN3B-206ENST00000530277 PRM3Q9NNZ6 103 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 GOLGA6AQ9NYA3 693 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 SMARCAL1Q9NZC9 954 aa13.68□□□□□ -0.22
SCN3B-206ENST00000530277 E9PMD0 336 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 STAT3P40763 770 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 TC2NQ8N9U0 490 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 PROCA1Q8NCQ7 364 aaPredicted RBP13.67□□□□□ -0.22
SCN3B-206ENST00000530277 FAM76AQ8TAV0 307 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 CCDC127Q96BQ5 260 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 SCLT1Q96NL6 688 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 PLCD4Q9BRC7 762 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 NBPF3Q9H094 633 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 MLXIPQ9HAP2 919 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 AGPAT5Q9NUQ2 364 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 BACH1O14867 736 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 PPIP5K2O43314 1243 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 LRRN2O75325 713 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 RAD17O75943 681 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 TTLL12Q14166 644 aaPredicted RBP13.67□□□□□ -0.22
SCN3B-206ENST00000530277 INTS5Q6P9B9 1019 aaKnown RBP13.67□□□□□ -0.22
SCN3B-206ENST00000530277 FAM133AQ8N9E0 248 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 TBC1D5Q92609 795 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 SELENOSQ9BQE4 189 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 NHEJ1Q9H9Q4 299 aaPredicted RBP13.67□□□□□ -0.22
SCN3B-206ENST00000530277 FAM217BQ9NTX9 383 aaPredicted RBP13.67□□□□□ -0.22
SCN3B-206ENST00000530277 ABHD10Q9NUJ1 306 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 PACSIN2Q9UNF0 486 aaPredicted RBP13.67□□□□□ -0.22
SCN3B-206ENST00000530277 A0A0U1RQJ8 604 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 USP17L10C9JJH3 530 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 NCK2O43639 380 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 EEF2P13639 858 aaKnown RBP13.67□□□□□ -0.22
SCN3B-206ENST00000530277 RDXP35241 583 aaKnown RBP13.67□□□□□ -0.22
SCN3B-206ENST00000530277 NCAPHQ15003 741 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 CCDC84Q86UT8 332 aaPredicted RBP13.67□□□□□ -0.22
SCN3B-206ENST00000530277 LARGE2Q8N3Y3 721 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 AFAP1L1Q8TED9 768 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 PIGOQ8TEQ8 1089 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 RABGGTAQ92696 567 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 PLA2G12BQ9BX93 195 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 DPH5Q9H2P9 285 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 HAUS4Q9H6D7 363 aa13.67□□□□□ -0.22
SCN3B-206ENST00000530277 ESYT3A0FGR9 886 aa13.66□□□□□ -0.22
SCN3B-206ENST00000530277 MYCNP04198 464 aaPredicted RBP13.66□□□□□ -0.22
SCN3B-206ENST00000530277 EPB41P11171 864 aaKnown RBP13.66□□□□□ -0.22
SCN3B-206ENST00000530277 NR2F2P24468 414 aa13.66□□□□□ -0.22
SCN3B-206ENST00000530277 VPS41P49754 854 aa13.66□□□□□ -0.22
SCN3B-206ENST00000530277 TROAPQ12815 778 aa13.66□□□□□ -0.22
SCN3B-206ENST00000530277 PHLDB2Q86SQ0 1253 aa13.66□□□□□ -0.22
SCN3B-206ENST00000530277 TUBE1Q9UJT0 475 aa13.66□□□□□ -0.22
SCN3B-206ENST00000530277 RFX7Q2KHR2 1363 aa13.66□□□□□ -0.22
SCN3B-206ENST00000530277 ZNF185O15231 689 aa13.66□□□□□ -0.22
SCN3B-206ENST00000530277 STK4Q13043 487 aa13.66□□□□□ -0.22
SCN3B-206ENST00000530277 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.66□□□□□ -0.22
SCN3B-206ENST00000530277 RWDD2AQ9UIY3 292 aa13.66□□□□□ -0.22
SCN3B-206ENST00000530277 PHLPP2Q6ZVD8 1323 aa13.66□□□□□ -0.22
SCN3B-206ENST00000530277 REREQ9P2R6 1566 aa13.66□□□□□ -0.22
SCN3B-206ENST00000530277 PRPF6O94906 941 aaKnown RBP13.66□□□□□ -0.22
SCN3B-206ENST00000530277 AKR1B1P15121 316 aa13.66□□□□□ -0.22
SCN3B-206ENST00000530277 GUCY2DQ02846 1103 aa13.66□□□□□ -0.22
SCN3B-206ENST00000530277 GRAPQ13588 217 aa13.66□□□□□ -0.22
SCN3B-206ENST00000530277 GRAPLQ8TC17 118 aaPredicted RBP13.66□□□□□ -0.22
SCN3B-206ENST00000530277 DDX12PQ92771 950 aa13.66□□□□□ -0.22
SCN3B-206ENST00000530277 ARMCX3Q9UH62 379 aaPredicted RBP13.66□□□□□ -0.22
SCN3B-206ENST00000530277 NARFQ9UHQ1 456 aa13.66□□□□□ -0.22
SCN3B-206ENST00000530277 IFT172Q9UG01 1749 aa13.66□□□□□ -0.22
SCN3B-206ENST00000530277 ARHGEF35A5YM69 484 aa13.65□□□□□ -0.22
SCN3B-206ENST00000530277 KRT5P13647 590 aa13.65□□□□□ -0.22
SCN3B-206ENST00000530277 ATP2B4P23634 1241 aa13.65□□□□□ -0.22
SCN3B-206ENST00000530277 GPSM2P81274 684 aa13.65□□□□□ -0.22
SCN3B-206ENST00000530277 DAAM2Q86T65 1068 aa13.65□□□□□ -0.22
SCN3B-206ENST00000530277 CCDC155Q8N6L0 562 aa13.65□□□□□ -0.22
SCN3B-206ENST00000530277 MB21D1Q8N884 522 aa13.65□□□□□ -0.22
SCN3B-206ENST00000530277 TBC1D22AQ8WUA7 517 aa13.65□□□□□ -0.22
SCN3B-206ENST00000530277 ACTN4O43707 911 aaKnown RBP13.65□□□□□ -0.22
SCN3B-206ENST00000530277 HAUS3Q68CZ6 603 aa13.65□□□□□ -0.22
SCN3B-206ENST00000530277 NUP58Q9BVL2 599 aa13.65□□□□□ -0.22
SCN3B-206ENST00000530277 SELENOOQ9BVL4 669 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms