RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 CCDC82Q8N4S0 544 aa6.55□□□□□ -1.36
RPUSD4-204ENST00000530036 MSL3Q8N5Y2 521 aaKnown RBP6.55□□□□□ -1.36
RPUSD4-204ENST00000530036 SAMD3Q8N6K7 520 aa6.55□□□□□ -1.36
RPUSD4-204ENST00000530036 ZNF713Q8N859 430 aaPredicted RBP6.55□□□□□ -1.36
RPUSD4-204ENST00000530036 SH3TC2Q8TF17 1288 aa6.55□□□□□ -1.36
RPUSD4-204ENST00000530036 GTF3C6Q969F1 213 aa6.55□□□□□ -1.36
RPUSD4-204ENST00000530036 LARP6Q9BRS8 491 aaKnown RBP6.55□□□□□ -1.36
RPUSD4-204ENST00000530036 RNF26Q9BY78 433 aaPredicted RBP6.55□□□□□ -1.36
RPUSD4-204ENST00000530036 SLC5A4Q9NY91 659 aa6.55□□□□□ -1.36
RPUSD4-204ENST00000530036 FLRT1Q9NZU1 646 aa6.55□□□□□ -1.36
RPUSD4-204ENST00000530036 RBM27Q9P2N5 1060 aaKnown RBP6.55□□□□□ -1.36
RPUSD4-204ENST00000530036 SEC63Q9UGP8 760 aaKnown RBP6.55□□□□□ -1.36
RPUSD4-204ENST00000530036 NAP1L2Q9ULW6 460 aaPredicted RBP6.55□□□□□ -1.36
RPUSD4-204ENST00000530036 MRPL11Q9Y3B7 192 aaKnown RBP6.55□□□□□ -1.36
RPUSD4-204ENST00000530036 FRMPD4Q14CM0 1322 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 SYNGAP1Q96PV0 1343 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 STK36Q9NRP7 1315 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 DNAH12Q6ZR08 3092 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 hCG_1642624A0A1W2PR95 340 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 PTPDC1A2A3K4 754 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 SOWAHBA6NEL2 793 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 POTEB2H3BUK9 544 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 STXBP3O00186 592 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 PRPF3O43395 683 aaKnown RBP6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 CYBAP13498 195 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 SCG2P13521 617 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 PRKAR2AP13861 404 aaKnown RBP6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 CCT2P78371 535 aaKnown RBP6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 CNTN2Q02246 1040 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 CACNB2Q08289 660 aaPredicted RBP6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 SCRN1Q12765 414 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 TRIM32Q13049 653 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 STK3Q13188 491 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 BAATQ14032 418 aaPredicted RBP6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 PFKFB3Q16875 520 aaPredicted RBP6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 WWC2Q6AWC2 1192 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 TYW1BQ6NUM6 668 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 PPP1R18Q6NYC8 613 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 RNF207Q6ZRF8 634 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 MCF2L2Q86YR7 1114 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 TEX2Q8IWB9 1127 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 SYTL5Q8TDW5 730 aaPredicted RBP6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 MORC4Q8TE76 937 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 PIBF1Q8WXW3 757 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 TBC1D5Q92609 795 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 GPKOWQ92917 476 aaPredicted RBP eCLIP6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 PHKBQ93100 1093 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 DDX11Q96FC9 970 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 TINF2Q9BSI4 451 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 SLKQ9H2G2 1235 aaPredicted RBP6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 PAK6Q9NQU5 681 aaPredicted RBP6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 BARHL2Q9NY43 387 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 MAP3K20Q9NYL2 800 aaKnown RBP6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 COL20A1Q9P218 1284 aa6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 V9GY48 417 aaPredicted RBP6.54□□□□□ -1.36
RPUSD4-204ENST00000530036 DOCK5Q9H7D0 1870 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 RPTORQ8N122 1335 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 ESYT2A0FGR8 921 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 PIK3CDO00329 1044 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 MEIS2O14770 477 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 CPLX1O14810 134 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 ST18O60284 1047 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 CDKL5O76039 1030 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 CD2BP2O95400 341 aaKnown RBP6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 CTDNEP1O95476 244 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 SNAI1O95863 264 aaPredicted RBP6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 CFBP00751 764 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 EDNRBP24530 442 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 CYP2C19P33261 490 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 ALDH5A1P51649 535 aaPredicted RBP6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 UBXN2AP68543 259 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 MTFR1Q15390 333 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 MFSD14CQ5VZR4 134 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 NOL8Q76FK4 1167 aaKnown RBP6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 ARMCX2Q7L311 632 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 HEATR3Q7Z4Q2 680 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 FAM177A1Q8N128 213 aaPredicted RBP6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 TRPV1Q8NER1 839 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 DNERQ8NFT8 737 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 SHISA4Q96DD7 197 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 PURBQ96QR8 312 aaKnown RBP6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 SLC26A6Q9BXS9 759 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 KATNBL1Q9H079 304 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 SH2B1Q9NRF2 756 aaPredicted RBP6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 ADD3Q9UEY8 706 aaKnown RBP6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 NRBP1Q9UHY1 535 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 LIMCH1Q9UPQ0 1083 aa6.53□□□□□ -1.36
RPUSD4-204ENST00000530036 ALPK3Q96L96 1907 aa6.52□□□□□ -1.37
RPUSD4-204ENST00000530036 ASB14A6NK59 587 aa6.52□□□□□ -1.37
RPUSD4-204ENST00000530036 GCOM1H8Y6P7 765 aaPredicted RBP6.52□□□□□ -1.37
RPUSD4-204ENST00000530036 PPFIA3O75145 1194 aa6.52□□□□□ -1.37
RPUSD4-204ENST00000530036 DEXIO95424 95 aa6.52□□□□□ -1.37
RPUSD4-204ENST00000530036 POLR2MP0CAP2 368 aa6.52□□□□□ -1.37
RPUSD4-204ENST00000530036 ZNF865P0CJ78 1059 aaPredicted RBP6.52□□□□□ -1.37
RPUSD4-204ENST00000530036 CCL5P13501 91 aa6.52□□□□□ -1.37
RPUSD4-204ENST00000530036 FDPSP14324 419 aaKnown RBP6.52□□□□□ -1.37
RPUSD4-204ENST00000530036 CALML3P27482 149 aa6.52□□□□□ -1.37
RPUSD4-204ENST00000530036 CCND3P30281 292 aaPredicted RBP6.52□□□□□ -1.37
RPUSD4-204ENST00000530036 HOXA13P31271 388 aaPredicted RBP6.52□□□□□ -1.37
RPUSD4-204ENST00000530036 FXR1P51114 621 aaKnown RBP eCLIP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms