RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 FAM193BQ96PV7 902 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-221ENST00000529873 SLC39A2Q9NP94 309 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 COPRSQ9NQ92 184 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 RTEL1Q9NZ71 1219 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 TTLL3Q9Y4R7 772 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 IL6STP40189 918 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-221ENST00000529873 TRAPPC10P48553 1259 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 IRX4P78413 519 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 DPY19L2Q6NUT2 758 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 PALD1Q9ULE6 856 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 CDK12Q9NYV4 1490 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-221ENST00000529873 EIF3CLB5ME19 914 aaKnown RBP9.29□□□□□ -0.92
CTNND1-221ENST00000529873 CAPN9O14815 690 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 ABCD1P33897 745 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 PHKA1P46020 1223 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 EIF3CQ99613 913 aaKnown RBP9.29□□□□□ -0.92
CTNND1-221ENST00000529873 ANO3Q9BYT9 981 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 ST7Q9NRC1 585 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 SEPT9Q9UHD8 586 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-221ENST00000529873 LOC102724428A0A0B4J2F2 783 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 TLR3O15455 904 aaKnown RBP9.29□□□□□ -0.92
CTNND1-221ENST00000529873 DNAJC8O75937 253 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-221ENST00000529873 TMEM191BP0C7N4 346 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 TMOD1P28289 359 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 SIK1P57059 783 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 PPP2R5CQ13362 524 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 PRPSAP1Q14558 356 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 ERFEQ4G0M1 354 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 KIAA0825Q8IV33 1275 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 HVCN1Q96D96 273 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 ANKRD36BP1Q96IX9 119 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 AK8Q96MA6 479 aa9.29□□□□□ -0.92
CTNND1-221ENST00000529873 ZNF277Q9NRM2 450 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-221ENST00000529873 ATF2P15336 505 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 LMNB1P20700 586 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 MAN1A1P33908 653 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 GUCY2FP51841 1108 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 COPB1P53618 953 aaKnown RBP9.28□□□□□ -0.92
CTNND1-221ENST00000529873 CCDC92Q53HC0 331 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-221ENST00000529873 FAM47CQ5HY64 1035 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 LRRC8AQ8IWT6 810 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 CNOT6LQ96LI5 555 aaKnown RBP9.28□□□□□ -0.92
CTNND1-221ENST00000529873 GBP5Q96PP8 586 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 IGSF1Q8N6C5 1336 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 A0A1W2PQ27 194 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 A0A1W2PQ64 194 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 A0A1W2PQD8 194 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 STX2P32856 288 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 ADD1P35611 737 aaKnown RBP9.28□□□□□ -0.92
CTNND1-221ENST00000529873 GARSP41250 739 aaKnown RBP9.28□□□□□ -0.92
CTNND1-221ENST00000529873 EXOC8Q8IYI6 725 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 NLGN1Q8N2Q7 840 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 MGARPQ8TDB4 240 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 CCDC17Q96LX7 622 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 ZNF577Q9BSK1 485 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 ATG3Q9NT62 314 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 ANKFY1Q9P2R3 1169 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 AFG3L2Q9Y4W6 797 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 BZW2Q9Y6E2 419 aaKnown RBP9.28□□□□□ -0.92
CTNND1-221ENST00000529873 TET3O43151 1660 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 METP08581 1390 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 ADD2P35612 726 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 PTGDRQ13258 359 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 GPATCH4Q5T3I0 446 aaKnown RBP9.28□□□□□ -0.92
CTNND1-221ENST00000529873 ARHGAP27Q6ZUM4 889 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 MAP4K1Q92918 833 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 TRIM56Q9BRZ2 755 aaKnown RBP9.28□□□□□ -0.92
CTNND1-221ENST00000529873 SOS2Q07890 1332 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-221ENST00000529873 RNF40O75150 1001 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 GCKP35557 465 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 PPP2R5AQ15172 486 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 AOC3Q16853 763 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 KRT71Q3SY84 523 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 ANKRD42Q8N9B4 389 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 TRIM11Q96F44 468 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 ACCSQ96QU6 501 aa9.28□□□□□ -0.92
CTNND1-221ENST00000529873 RNF26Q9BY78 433 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-221ENST00000529873 PSDA5PKW4 1024 aaPredicted RBP9.27□□□□□ -0.92
CTNND1-221ENST00000529873 ITKQ08881 620 aa9.27□□□□□ -0.92
CTNND1-221ENST00000529873 SESTD1Q86VW0 696 aa9.27□□□□□ -0.92
CTNND1-221ENST00000529873 CCDC170Q8IYT3 715 aa9.27□□□□□ -0.92
CTNND1-221ENST00000529873 MRFAP1L1Q96HT8 127 aa9.27□□□□□ -0.92
CTNND1-221ENST00000529873 RILPQ96NA2 401 aa9.27□□□□□ -0.92
CTNND1-221ENST00000529873 AMNQ9BXJ7 453 aa9.27□□□□□ -0.92
CTNND1-221ENST00000529873 PUS3Q9BZE2 481 aaKnown RBP9.27□□□□□ -0.92
CTNND1-221ENST00000529873 HESX1Q9UBX0 185 aa9.27□□□□□ -0.92
CTNND1-221ENST00000529873 DDX41Q9UJV9 622 aaKnown RBP9.27□□□□□ -0.92
CTNND1-221ENST00000529873 KDM6BO15054 1643 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 PFDN6O15212 129 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 DLATP10515 647 aaKnown RBP9.27□□□□□ -0.93
CTNND1-221ENST00000529873 POLR2BP30876 1174 aaKnown RBP9.27□□□□□ -0.93
CTNND1-221ENST00000529873 RASSF2P50749 326 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 GPT2Q8TD30 523 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 TLR7Q9NYK1 1049 aaKnown RBP9.27□□□□□ -0.93
CTNND1-221ENST00000529873 IPO11Q9UI26 975 aaKnown RBP9.27□□□□□ -0.93
CTNND1-221ENST00000529873 DTNBO60941 627 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 PSMC2P35998 433 aaKnown RBP9.27□□□□□ -0.93
CTNND1-221ENST00000529873 BIRC2Q13490 618 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 FAM26FQ5R3K3 315 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 MAP3K21Q5TCX8 1036 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms