RNA–Protein interactions for RNA: ENST00000529851.5

APLF-206, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 2,863 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-206ENST00000529851 MAP2K1Q02750 393 aaPredicted RBP17.51■□□□□ 0.39
APLF-206ENST00000529851 GALNT17Q6IS24 598 aa17.51■□□□□ 0.39
APLF-206ENST00000529851 CCDC73Q6ZRK6 1079 aa17.51■□□□□ 0.39
APLF-206ENST00000529851 TMTC3Q6ZXV5 915 aa17.51■□□□□ 0.39
APLF-206ENST00000529851 GMCL1Q96IK5 515 aa17.51■□□□□ 0.39
APLF-206ENST00000529851 IRX2Q9BZI1 471 aaPredicted RBP17.51■□□□□ 0.39
APLF-206ENST00000529851 RNF181Q9P0P0 153 aa17.51■□□□□ 0.39
APLF-206ENST00000529851 SAP30BPQ9UHR5 308 aaKnown RBP17.51■□□□□ 0.39
APLF-206ENST00000529851 L1RE1Q9UN81 338 aa17.51■□□□□ 0.39
APLF-206ENST00000529851 SMIM22K7EJ46 135 aa17.51■□□□□ 0.39
APLF-206ENST00000529851 CTAGE5O15320 804 aa17.51■□□□□ 0.39
APLF-206ENST00000529851 DEXIO95424 95 aa17.51■□□□□ 0.39
APLF-206ENST00000529851 RHOXF2BP0C7M4 288 aa17.51■□□□□ 0.39
APLF-206ENST00000529851 ATP1A3P13637 1013 aa17.51■□□□□ 0.39
APLF-206ENST00000529851 CHMP4BP1P59074 171 aa17.51■□□□□ 0.39
APLF-206ENST00000529851 NFXL1Q6ZNB6 911 aa17.51■□□□□ 0.39
APLF-206ENST00000529851 RHOXF2Q9BQY4 288 aa17.51■□□□□ 0.39
APLF-206ENST00000529851 CASP8Q14790 479 aa17.5■□□□□ 0.39
APLF-206ENST00000529851 CERKLQ49MI3 558 aaPredicted RBP17.5■□□□□ 0.39
APLF-206ENST00000529851 GPATCH4Q5T3I0 446 aaKnown RBP17.5■□□□□ 0.39
APLF-206ENST00000529851 DYNLL2Q96FJ2 89 aa17.5■□□□□ 0.39
APLF-206ENST00000529851 PNMA2Q9UL42 364 aa17.5■□□□□ 0.39
APLF-206ENST00000529851 NEBLO76041 1014 aa17.5■□□□□ 0.39
APLF-206ENST00000529851 TFRCP02786 760 aaKnown RBP17.5■□□□□ 0.39
APLF-206ENST00000529851 KARSQ15046 597 aaKnown RBP17.5■□□□□ 0.39
APLF-206ENST00000529851 TTC19Q6DKK2 380 aaPredicted RBP17.5■□□□□ 0.39
APLF-206ENST00000529851 CRACR2BQ8N4Y2 399 aaPredicted RBP17.5■□□□□ 0.39
APLF-206ENST00000529851 CTCFLQ8NI51 663 aaPredicted RBP17.5■□□□□ 0.39
APLF-206ENST00000529851 CCDC12Q8WUD4 166 aaPredicted RBP17.5■□□□□ 0.39
APLF-206ENST00000529851 SDF4Q9BRK5 362 aa17.5■□□□□ 0.39
APLF-206ENST00000529851 CTNND1O60716 968 aaKnown RBP17.5■□□□□ 0.39
APLF-206ENST00000529851 PICALMQ13492 652 aa17.5■□□□□ 0.39
APLF-206ENST00000529851 PNMA8AQ86V59 439 aaPredicted RBP17.5■□□□□ 0.39
APLF-206ENST00000529851 TRIM22Q8IYM9 498 aa17.5■□□□□ 0.39
APLF-206ENST00000529851 CSRNP1Q96S65 589 aa17.5■□□□□ 0.39
APLF-206ENST00000529851 FAM169AQ9Y6X4 670 aa17.5■□□□□ 0.39
APLF-206ENST00000529851 TRAF1Q13077 416 aa17.49■□□□□ 0.39
APLF-206ENST00000529851 RRP12Q5JTH9 1297 aaKnown RBP17.49■□□□□ 0.39
APLF-206ENST00000529851 NAIF1Q69YI7 327 aaPredicted RBP17.49■□□□□ 0.39
APLF-206ENST00000529851 PPP1R18Q6NYC8 613 aa17.49■□□□□ 0.39
APLF-206ENST00000529851 FAM71BQ8TC56 605 aa17.49■□□□□ 0.39
APLF-206ENST00000529851 TMEM47Q9BQJ4 181 aa17.49■□□□□ 0.39
APLF-206ENST00000529851 CABP5Q9NP86 173 aa17.49■□□□□ 0.39
APLF-206ENST00000529851 ZSCAN12O43309 604 aa17.49■□□□□ 0.39
APLF-206ENST00000529851 RNF40O75150 1001 aa17.49■□□□□ 0.39
APLF-206ENST00000529851 PAX7P23759 505 aa17.49■□□□□ 0.39
APLF-206ENST00000529851 USP8P40818 1118 aa17.49■□□□□ 0.39
APLF-206ENST00000529851 SUPT20HL1Q3ZLR7 823 aa17.49■□□□□ 0.39
APLF-206ENST00000529851 RBM26Q5T8P6 1007 aaKnown RBP17.49■□□□□ 0.39
APLF-206ENST00000529851 PNMA1Q8ND90 353 aa17.49■□□□□ 0.39
APLF-206ENST00000529851 LOC285556D6RIA3 1793 aa17.48■□□□□ 0.39
APLF-206ENST00000529851 CPLX1O14810 134 aa17.48■□□□□ 0.39
APLF-206ENST00000529851 SSRP1Q08945 709 aaKnown RBP17.48■□□□□ 0.39
APLF-206ENST00000529851 BTNL9Q6UXG8 535 aa17.48■□□□□ 0.39
APLF-206ENST00000529851 ZNF341Q9BYN7 854 aa17.48■□□□□ 0.39
APLF-206ENST00000529851 HACL1Q9UJ83 578 aa17.48■□□□□ 0.39
APLF-206ENST00000529851 LRRIQ3A6PVS8 624 aaPredicted RBP17.48■□□□□ 0.39
APLF-206ENST00000529851 PHF20L1A8MW92 1017 aa17.48■□□□□ 0.39
APLF-206ENST00000529851 ATP2B2Q01814 1243 aa17.48■□□□□ 0.39
APLF-206ENST00000529851 ABCB5Q2M3G0 1257 aa17.48■□□□□ 0.39
APLF-206ENST00000529851 ZFPM1Q8IX07 1006 aa17.48■□□□□ 0.39
APLF-206ENST00000529851 FSIP1Q8NA03 581 aa17.48■□□□□ 0.39
APLF-206ENST00000529851 KIFC2Q96AC6 838 aa17.48■□□□□ 0.39
APLF-206ENST00000529851 MIEF2Q96C03 454 aa17.48■□□□□ 0.39
APLF-206ENST00000529851 MTMR8Q96EF0 704 aa17.48■□□□□ 0.39
APLF-206ENST00000529851 ASNSP08243 561 aa17.47■□□□□ 0.39
APLF-206ENST00000529851 VSNL1P62760 191 aa17.47■□□□□ 0.39
APLF-206ENST00000529851 FANCCQ00597 558 aa17.47■□□□□ 0.39
APLF-206ENST00000529851 BRAPQ7Z569 592 aa17.47■□□□□ 0.39
APLF-206ENST00000529851 DESI2Q9BSY9 194 aa17.47■□□□□ 0.39
APLF-206ENST00000529851 WDR18Q9BV38 432 aa17.47■□□□□ 0.39
APLF-206ENST00000529851 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.47■□□□□ 0.39
APLF-206ENST00000529851 CD248Q9HCU0 757 aa17.47■□□□□ 0.39
APLF-206ENST00000529851 AKR1B1P15121 316 aa17.47■□□□□ 0.39
APLF-206ENST00000529851 CAP2P40123 477 aa17.47■□□□□ 0.39
APLF-206ENST00000529851 NBPF9Q3BBW0 867 aa17.47■□□□□ 0.39
APLF-206ENST00000529851 AFAP1L1Q8TED9 768 aa17.47■□□□□ 0.39
APLF-206ENST00000529851 N4BP2L2Q92802 583 aaPredicted RBP17.47■□□□□ 0.39
APLF-206ENST00000529851 PHKBQ93100 1093 aa17.47■□□□□ 0.39
APLF-206ENST00000529851 CEP95Q96GE4 821 aa17.47■□□□□ 0.39
APLF-206ENST00000529851 RIOX1Q9H6W3 641 aa17.47■□□□□ 0.39
APLF-206ENST00000529851 ERLIN1O75477 346 aa17.46■□□□□ 0.39
APLF-206ENST00000529851 ME1P48163 572 aa17.46■□□□□ 0.39
APLF-206ENST00000529851 TOGARAM2Q6ZUX3 1019 aa17.46■□□□□ 0.39
APLF-206ENST00000529851 CCDC82Q8N4S0 544 aa17.46■□□□□ 0.39
APLF-206ENST00000529851 DAGLBQ8NCG7 672 aa17.46■□□□□ 0.39
APLF-206ENST00000529851 HNRNPLLQ8WVV9 542 aaKnown RBP17.46■□□□□ 0.39
APLF-206ENST00000529851 RIN2Q8WYP3 895 aaPredicted RBP17.46■□□□□ 0.39
APLF-206ENST00000529851 CFAP45Q9UL16 551 aa17.46■□□□□ 0.39
APLF-206ENST00000529851 CNTNAP5Q8WYK1 1306 aa17.46■□□□□ 0.39
APLF-206ENST00000529851 ESYT2A0FGR8 921 aa17.46■□□□□ 0.39
APLF-206ENST00000529851 XBP1P17861 261 aa17.46■□□□□ 0.39
APLF-206ENST00000529851 RASA3Q14644 834 aa17.46■□□□□ 0.39
APLF-206ENST00000529851 FAXDC2Q96IV6 333 aa17.46■□□□□ 0.39
APLF-206ENST00000529851 ZKSCAN3Q9BRR0 538 aa17.46■□□□□ 0.39
APLF-206ENST00000529851 MAD2L2Q9UI95 211 aa17.46■□□□□ 0.39
APLF-206ENST00000529851 PCDHAC2Q9Y5I4 1007 aa17.46■□□□□ 0.39
APLF-206ENST00000529851 CLIC4Q9Y696 253 aa17.46■□□□□ 0.39
APLF-206ENST00000529851 PARP14Q460N5 1801 aa17.46■□□□□ 0.38
APLF-206ENST00000529851 A0A1B0GVL5 298 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms