RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 COPS5Q92905 334 aa4.52□□□□□ -1.69
AMBRA1-208ENST00000529558 AIFM3Q96NN9 605 aa4.52□□□□□ -1.69
AMBRA1-208ENST00000529558 STRBPQ96SI9 672 aaKnown RBP4.52□□□□□ -1.69
AMBRA1-208ENST00000529558 ASPNQ9BXN1 380 aa4.52□□□□□ -1.69
AMBRA1-208ENST00000529558 SUGCTQ9HAC7 445 aa4.52□□□□□ -1.69
AMBRA1-208ENST00000529558 SSU72Q9NP77 194 aaKnown RBP4.52□□□□□ -1.69
AMBRA1-208ENST00000529558 CABP5Q9NP86 173 aa4.52□□□□□ -1.69
AMBRA1-208ENST00000529558 ANLNQ9NQW6 1124 aa4.52□□□□□ -1.69
AMBRA1-208ENST00000529558 MBIPQ9NS73 344 aa4.52□□□□□ -1.69
AMBRA1-208ENST00000529558 THG1LQ9NWX6 298 aaKnown RBP4.52□□□□□ -1.69
AMBRA1-208ENST00000529558 AP4E1Q9UPM8 1137 aa4.52□□□□□ -1.69
AMBRA1-208ENST00000529558 SF3B6Q9Y3B4 125 aaKnown RBP4.52□□□□□ -1.69
AMBRA1-208ENST00000529558 DAAM1Q9Y4D1 1078 aa4.52□□□□□ -1.69
AMBRA1-208ENST00000529558 ARNTLO00327 626 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 NRG2O14511 850 aaPredicted RBP4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 VCAM1P19320 739 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 MECP2P51608 486 aaKnown RBP4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 KPNA1P52294 538 aaPredicted RBP4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 SOX4Q06945 474 aaPredicted RBP4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 SCRN1Q12765 414 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 RAPGEF1Q13905 1077 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 GRM3Q14832 879 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 ODF1Q14990 250 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 SAFBQ15424 915 aaKnown RBP eCLIP4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 TESK1Q15569 626 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 GRAMD1BQ3KR37 738 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 ARHGAP29Q52LW3 1261 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 TMEM177Q53S58 311 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 ACBD5Q5T8D3 534 aaPredicted RBP4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 NUTM2GQ5VZR2 741 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 CYB5RLQ6IPT4 315 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 LETMD1Q6P1Q0 360 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 PGM2L1Q6PCE3 622 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 DYMQ7RTS9 669 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 HDGFL2Q7Z4V5 671 aaPredicted RBP4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 CDH24Q86UP0 819 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 PNMA8AQ86V59 439 aaPredicted RBP4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 MORC1Q86VD1 984 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 SMYD4Q8IYR2 804 aaPredicted RBP4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 CMTR2Q8IYT2 770 aaKnown RBP4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 CLRN3Q8NCR9 226 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 SMG8Q8ND04 991 aaKnown RBP4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 PCDH19Q8TAB3 1148 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 DCAF11Q8TEB1 546 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 FRS2Q8WU20 508 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 UBE2Q2Q8WVN8 375 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 ZDHHC15Q96MV8 337 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 NUP88Q99567 741 aaPredicted RBP4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 PHF20Q9BVI0 1012 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 CELF4Q9BZC1 486 aaKnown RBP4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 PIDD1Q9HB75 910 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 CYP4F12Q9HCS2 524 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 PTPRHQ9HD43 1115 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 DDX21Q9NR30 783 aaKnown RBP eCLIP4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 MAN1C1Q9NR34 630 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 GPR27Q9NS67 375 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 GFOD1Q9NXC2 390 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 PCOLCE2Q9UKZ9 415 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 COQ6Q9Y2Z9 468 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 ST14Q9Y5Y6 855 aa4.51□□□□□ -1.69
AMBRA1-208ENST00000529558 WASHC2AQ641Q2 1341 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 FRMPD2Q68DX3 1309 aaPredicted RBP4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 DLL1O00548 723 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 APAF1O14727 1248 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 NRDCO43847 1150 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 PCDHGA12O60330 932 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 GFRA3O60609 400 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 THBDP07204 575 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 SRGAP2CP0DJJ0 459 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 DRD2P14416 443 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 ETV3P41162 512 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 ASPAP45381 313 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 ZNF280AP59817 542 aaPredicted RBP4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 PAK1Q13153 545 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 SNW1Q13573 536 aaKnown RBP4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 COL9A3Q14050 684 aaPredicted RBP4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 DPY19L1Q2PZI1 675 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 TMEM95Q3KNT9 176 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 FAM83BQ5T0W9 1011 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 GPR158Q5T848 1215 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 OVCH1Q7RTY7 1134 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 PPIL6Q8IXY8 311 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 DTWD1Q8N5C7 304 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 CHST14Q8NCH0 376 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 NPLOC4Q8TAT6 608 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 SLC5A5Q92911 643 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 TTC17Q96AE7 1141 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 HSPBAP1Q96EW2 488 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 ELAC2Q9BQ52 826 aaKnown RBP4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 MCMBPQ9BTE3 642 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 PPCSQ9HAB8 311 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 CASS4Q9NQ75 786 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 GPRC5CQ9NQ84 441 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 C14orf119Q9NWQ9 140 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 RNF112Q9ULX5 631 aa4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 PCDHGA9Q9Y5G4 932 aaKnown RBP4.5□□□□□ -1.69
AMBRA1-208ENST00000529558 PCDHGA8Q9Y5G5 932 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms