RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 TRERF1Q96PN7 1200 aa13.9□□□□□ -0.18
AMBRA1-207ENST00000529553 PRRX2Q99811 253 aa13.9□□□□□ -0.18
AMBRA1-207ENST00000529553 WDR11Q9BZH6 1224 aa13.9□□□□□ -0.18
AMBRA1-207ENST00000529553 HOMER2Q9NSB8 354 aa13.9□□□□□ -0.18
AMBRA1-207ENST00000529553 RNF146Q9NTX7 359 aa13.9□□□□□ -0.18
AMBRA1-207ENST00000529553 CYP39A1Q9NYL5 469 aa13.9□□□□□ -0.18
AMBRA1-207ENST00000529553 TNNQ9UQP3 1299 aa13.9□□□□□ -0.18
AMBRA1-207ENST00000529553 SLC4A4Q9Y6R1 1079 aa13.9□□□□□ -0.18
AMBRA1-207ENST00000529553 ABHD14A-ACY1A0A1B0GW23 586 aa13.89□□□□□ -0.19
AMBRA1-207ENST00000529553 RBM47A0AV96 593 aaKnown RBP13.89□□□□□ -0.19
AMBRA1-207ENST00000529553 LINC01553A4QN01 128 aa13.89□□□□□ -0.19
AMBRA1-207ENST00000529553 PLA2G6O60733 806 aa13.89□□□□□ -0.19
AMBRA1-207ENST00000529553 EFCAB14O75071 495 aa13.89□□□□□ -0.19
AMBRA1-207ENST00000529553 GJB5O95377 273 aa13.89□□□□□ -0.19
AMBRA1-207ENST00000529553 MYL3P08590 195 aa13.89□□□□□ -0.19
AMBRA1-207ENST00000529553 PTGS1P23219 599 aa13.89□□□□□ -0.19
AMBRA1-207ENST00000529553 TMEM63BQ5T3F8 832 aa13.89□□□□□ -0.19
AMBRA1-207ENST00000529553 FAM160B2Q86V87 743 aa13.89□□□□□ -0.19
AMBRA1-207ENST00000529553 FBXO16Q8IX29 292 aaPredicted RBP13.89□□□□□ -0.19
AMBRA1-207ENST00000529553 AFAP1L1Q8TED9 768 aa13.89□□□□□ -0.19
AMBRA1-207ENST00000529553 DNAJC2Q99543 621 aaKnown RBP13.89□□□□□ -0.19
AMBRA1-207ENST00000529553 ZNF287Q9HBT7 754 aa13.89□□□□□ -0.19
AMBRA1-207ENST00000529553 NKRFO15226 690 aaKnown RBP eCLIP13.88□□□□□ -0.19
AMBRA1-207ENST00000529553 TTLL1O95922 423 aa13.88□□□□□ -0.19
AMBRA1-207ENST00000529553 ZP2Q05996 745 aa13.88□□□□□ -0.19
AMBRA1-207ENST00000529553 PKN1Q16512 942 aa13.88□□□□□ -0.19
AMBRA1-207ENST00000529553 FAM47CQ5HY64 1035 aa13.88□□□□□ -0.19
AMBRA1-207ENST00000529553 CNKSR3Q6P9H4 555 aa13.88□□□□□ -0.19
AMBRA1-207ENST00000529553 GIMAP6Q6P9H5 292 aa13.88□□□□□ -0.19
AMBRA1-207ENST00000529553 HFE2Q6ZVN8 426 aa13.88□□□□□ -0.19
AMBRA1-207ENST00000529553 EEPD1Q7L9B9 569 aa13.88□□□□□ -0.19
AMBRA1-207ENST00000529553 CLASRPQ8N2M8 674 aaKnown RBP13.88□□□□□ -0.19
AMBRA1-207ENST00000529553 STAG1Q8WVM7 1258 aa13.88□□□□□ -0.19
AMBRA1-207ENST00000529553 MRPL38Q96DV4 380 aaKnown RBP13.88□□□□□ -0.19
AMBRA1-207ENST00000529553 PAG1Q9NWQ8 432 aa13.88□□□□□ -0.19
AMBRA1-207ENST00000529553 MTMR4Q9NYA4 1195 aa13.88□□□□□ -0.19
AMBRA1-207ENST00000529553 ADD3Q9UEY8 706 aaKnown RBP13.88□□□□□ -0.19
AMBRA1-207ENST00000529553 NOD1Q9Y239 953 aa13.88□□□□□ -0.19
AMBRA1-207ENST00000529553 RAD50Q92878 1312 aa13.88□□□□□ -0.19
AMBRA1-207ENST00000529553 A6NJR5 290 aa13.87□□□□□ -0.19
AMBRA1-207ENST00000529553 TMEM232C9JQI7 657 aa13.87□□□□□ -0.19
AMBRA1-207ENST00000529553 CXCL10P02778 98 aa13.87□□□□□ -0.19
AMBRA1-207ENST00000529553 STAT2P52630 851 aa13.87□□□□□ -0.19
AMBRA1-207ENST00000529553 PTPN5P54829 565 aa13.87□□□□□ -0.19
AMBRA1-207ENST00000529553 GPNMBQ14956 572 aa13.87□□□□□ -0.19
AMBRA1-207ENST00000529553 COL19A1Q14993 1142 aa13.87□□□□□ -0.19
AMBRA1-207ENST00000529553 PTPROQ16827 1216 aa13.87□□□□□ -0.19
AMBRA1-207ENST00000529553 ZKSCAN2Q63HK3 967 aa13.87□□□□□ -0.19
AMBRA1-207ENST00000529553 SLFN13Q68D06 897 aa13.87□□□□□ -0.19
AMBRA1-207ENST00000529553 ZSCAN25Q6NSZ9 544 aa13.87□□□□□ -0.19
AMBRA1-207ENST00000529553 BMP8AQ7Z5Y6 402 aa13.87□□□□□ -0.19
AMBRA1-207ENST00000529553 ADHFE1Q8IWW8 467 aa13.87□□□□□ -0.19
AMBRA1-207ENST00000529553 ZNF444Q8N0Y2 327 aaPredicted RBP13.87□□□□□ -0.19
AMBRA1-207ENST00000529553 RHPN1Q8TCX5 695 aa13.87□□□□□ -0.19
AMBRA1-207ENST00000529553 PABPC5Q96DU9 382 aaKnown RBP13.87□□□□□ -0.19
AMBRA1-207ENST00000529553 C1orf115Q9H7X2 142 aa13.87□□□□□ -0.19
AMBRA1-207ENST00000529553 EXOC6BQ9Y2D4 811 aa13.87□□□□□ -0.19
AMBRA1-207ENST00000529553 WDFY4Q6ZS81 3184 aa13.86□□□□□ -0.19
AMBRA1-207ENST00000529553 NCK2O43639 380 aa13.86□□□□□ -0.19
AMBRA1-207ENST00000529553 ALAS1P13196 640 aa13.86□□□□□ -0.19
AMBRA1-207ENST00000529553 SELPP16109 830 aa13.86□□□□□ -0.19
AMBRA1-207ENST00000529553 RBL2Q08999 1139 aa13.86□□□□□ -0.19
AMBRA1-207ENST00000529553 HERC4Q5GLZ8 1057 aaPredicted RBP13.86□□□□□ -0.19
AMBRA1-207ENST00000529553 LRRC47Q8N1G4 583 aaKnown RBP13.86□□□□□ -0.19
AMBRA1-207ENST00000529553 OR6J1Q8NGC5 347 aa13.86□□□□□ -0.19
AMBRA1-207ENST00000529553 GMCL1Q96IK5 515 aa13.86□□□□□ -0.19
AMBRA1-207ENST00000529553 MTUS1Q9ULD2 1270 aa13.86□□□□□ -0.19
AMBRA1-207ENST00000529553 INSL6Q9Y581 213 aa13.86□□□□□ -0.19
AMBRA1-207ENST00000529553 BRWD1Q9NSI6 2320 aa13.86□□□□□ -0.19
AMBRA1-207ENST00000529553 ZNF316A6NFI3 1004 aaPredicted RBP13.85□□□□□ -0.19
AMBRA1-207ENST00000529553 IFIT2P09913 472 aaKnown RBP13.85□□□□□ -0.19
AMBRA1-207ENST00000529553 DEFB103AP81534 67 aa13.85□□□□□ -0.19
AMBRA1-207ENST00000529553 IKBKEQ14164 716 aa13.85□□□□□ -0.19
AMBRA1-207ENST00000529553 PTGISQ16647 500 aa13.85□□□□□ -0.19
AMBRA1-207ENST00000529553 SLFNL1Q499Z3 407 aa13.85□□□□□ -0.19
AMBRA1-207ENST00000529553 TIGD5Q53EQ6 642 aa13.85□□□□□ -0.19
AMBRA1-207ENST00000529553 CEP85Q6P2H3 762 aa13.85□□□□□ -0.19
AMBRA1-207ENST00000529553 SESTD1Q86VW0 696 aa13.85□□□□□ -0.19
AMBRA1-207ENST00000529553 FBXO22Q8NEZ5 403 aa13.85□□□□□ -0.19
AMBRA1-207ENST00000529553 CEP95Q96GE4 821 aa13.85□□□□□ -0.19
AMBRA1-207ENST00000529553 SAMD11Q96NU1 681 aa13.85□□□□□ -0.19
AMBRA1-207ENST00000529553 CRBNQ96SW2 442 aa13.85□□□□□ -0.19
AMBRA1-207ENST00000529553 IL1RAPL2Q9NP60 686 aa13.85□□□□□ -0.19
AMBRA1-207ENST00000529553 MCM3APO60318 1980 aa13.84□□□□□ -0.19
AMBRA1-207ENST00000529553 H3BQ06 376 aaPredicted RBP13.84□□□□□ -0.19
AMBRA1-207ENST00000529553 ATP5JP18859 108 aa13.84□□□□□ -0.19
AMBRA1-207ENST00000529553 MUM1L1Q5H9M0 696 aa13.84□□□□□ -0.19
AMBRA1-207ENST00000529553 TMCO2Q7Z6W1 182 aaPredicted RBP13.84□□□□□ -0.19
AMBRA1-207ENST00000529553 KIF1BPQ96EK5 621 aa13.84□□□□□ -0.19
AMBRA1-207ENST00000529553 STRBPQ96SI9 672 aaKnown RBP13.84□□□□□ -0.19
AMBRA1-207ENST00000529553 POP1Q99575 1024 aaKnown RBP13.84□□□□□ -0.19
AMBRA1-207ENST00000529553 PUS7LQ9H0K6 701 aaKnown RBP13.84□□□□□ -0.19
AMBRA1-207ENST00000529553 DDX49Q9Y6V7 483 aaKnown RBP13.84□□□□□ -0.19
AMBRA1-207ENST00000529553 GSG1L2A8MUP6 293 aa13.83□□□□□ -0.2
AMBRA1-207ENST00000529553 SLC1A4P43007 532 aa13.83□□□□□ -0.2
AMBRA1-207ENST00000529553 ALDH5A1P51649 535 aaPredicted RBP13.83□□□□□ -0.2
AMBRA1-207ENST00000529553 IKQ13123 557 aaPredicted RBP13.83□□□□□ -0.2
AMBRA1-207ENST00000529553 PPP4R3BQ5MIZ7 849 aa13.83□□□□□ -0.2
AMBRA1-207ENST00000529553 RCSD1Q6JBY9 416 aa13.83□□□□□ -0.2
AMBRA1-207ENST00000529553 LRRC8DQ7L1W4 858 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms