RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 IQSEC1Q6DN90 963 aa10.71□□□□□ -0.69
VPS11-203ENST00000529545 FAM133AQ8N9E0 248 aa10.71□□□□□ -0.69
VPS11-203ENST00000529545 GMCL1P1Q8NEA9 526 aa10.71□□□□□ -0.69
VPS11-203ENST00000529545 PANK1Q8TE04 598 aa10.71□□□□□ -0.69
VPS11-203ENST00000529545 CHURC1Q8WUH1 139 aa10.71□□□□□ -0.69
VPS11-203ENST00000529545 MKL1Q969V6 931 aa10.71□□□□□ -0.69
VPS11-203ENST00000529545 HS3ST6Q96QI5 342 aa10.71□□□□□ -0.69
VPS11-203ENST00000529545 STRBPQ96SI9 672 aaKnown RBP10.71□□□□□ -0.69
VPS11-203ENST00000529545 KATNBL1Q9H079 304 aa10.71□□□□□ -0.69
VPS11-203ENST00000529545 RNF146Q9NTX7 359 aa10.71□□□□□ -0.69
VPS11-203ENST00000529545 COG5Q9UP83 839 aa10.71□□□□□ -0.69
VPS11-203ENST00000529545 GNEQ9Y223 722 aaKnown RBP10.71□□□□□ -0.69
VPS11-203ENST00000529545 Q9Y3F1 56 aa10.71□□□□□ -0.69
VPS11-203ENST00000529545 CHD9Q3L8U1 2897 aa10.7□□□□□ -0.7
VPS11-203ENST00000529545 ASTN1O14525 1302 aa10.7□□□□□ -0.7
VPS11-203ENST00000529545 FAM205CA6NFA0 338 aa10.7□□□□□ -0.7
VPS11-203ENST00000529545 KIF28PB7ZC32 967 aa10.7□□□□□ -0.7
VPS11-203ENST00000529545 TMEM232C9JQI7 657 aa10.7□□□□□ -0.7
VPS11-203ENST00000529545 B4GALT4O60513 344 aa10.7□□□□□ -0.7
VPS11-203ENST00000529545 CHGBP05060 677 aa10.7□□□□□ -0.7
VPS11-203ENST00000529545 APPP05067 770 aa10.7□□□□□ -0.7
VPS11-203ENST00000529545 MYOGP15173 224 aa10.7□□□□□ -0.7
VPS11-203ENST00000529545 SMPD1P17405 629 aa10.7□□□□□ -0.7
VPS11-203ENST00000529545 TDO2P48775 406 aa10.7□□□□□ -0.7
VPS11-203ENST00000529545 STAT2P52630 851 aa10.7□□□□□ -0.7
VPS11-203ENST00000529545 FAM160B2Q86V87 743 aa10.7□□□□□ -0.7
VPS11-203ENST00000529545 LRRC47Q8N1G4 583 aaKnown RBP10.7□□□□□ -0.7
VPS11-203ENST00000529545 CEP95Q96GE4 821 aa10.7□□□□□ -0.7
VPS11-203ENST00000529545 SCLYQ96I15 445 aa10.7□□□□□ -0.7
VPS11-203ENST00000529545 TRERF1Q96PN7 1200 aa10.7□□□□□ -0.7
VPS11-203ENST00000529545 WNT8AQ9H1J5 351 aa10.7□□□□□ -0.7
VPS11-203ENST00000529545 CHMP4BQ9H444 224 aaKnown RBP10.7□□□□□ -0.7
VPS11-203ENST00000529545 A1CFQ9NQ94 594 aaKnown RBP10.7□□□□□ -0.7
VPS11-203ENST00000529545 MTMR4Q9NYA4 1195 aa10.7□□□□□ -0.7
VPS11-203ENST00000529545 ARIH1Q9Y4X5 557 aaPredicted RBP10.7□□□□□ -0.7
VPS11-203ENST00000529545 GRIN2DO15399 1336 aa10.69□□□□□ -0.7
VPS11-203ENST00000529545 IGKV6D-41A0A0C4DH26 115 aa10.69□□□□□ -0.7
VPS11-203ENST00000529545 SOWAHBA6NEL2 793 aa10.69□□□□□ -0.7
VPS11-203ENST00000529545 GSG1L2A8MUP6 293 aa10.69□□□□□ -0.7
VPS11-203ENST00000529545 SLC3A2P08195 630 aaKnown RBP10.69□□□□□ -0.7
VPS11-203ENST00000529545 TSPY3P0CV98 308 aa10.69□□□□□ -0.7
VPS11-203ENST00000529545 TSPY8P0CW00 308 aa10.69□□□□□ -0.7
VPS11-203ENST00000529545 ALAS1P13196 640 aa10.69□□□□□ -0.7
VPS11-203ENST00000529545 GNAT2P19087 354 aa10.69□□□□□ -0.7
VPS11-203ENST00000529545 POU3F3P20264 500 aaPredicted RBP10.69□□□□□ -0.7
VPS11-203ENST00000529545 KCNQ1P51787 676 aa10.69□□□□□ -0.7
VPS11-203ENST00000529545 PSMC6P62333 389 aa10.69□□□□□ -0.7
VPS11-203ENST00000529545 TMEM31Q5JXX7 168 aa10.69□□□□□ -0.7
VPS11-203ENST00000529545 PPP4R3BQ5MIZ7 849 aa10.69□□□□□ -0.7
VPS11-203ENST00000529545 KIAA1211Q6ZU35 1233 aa10.69□□□□□ -0.7
VPS11-203ENST00000529545 EEPD1Q7L9B9 569 aa10.69□□□□□ -0.7
VPS11-203ENST00000529545 DEFB128Q7Z7B8 93 aa10.69□□□□□ -0.7
VPS11-203ENST00000529545 STAG1Q8WVM7 1258 aa10.69□□□□□ -0.7
VPS11-203ENST00000529545 AGBL1Q96MI9 1066 aa10.69□□□□□ -0.7
VPS11-203ENST00000529545 SLC9A7Q96T83 725 aa10.69□□□□□ -0.7
VPS11-203ENST00000529545 ALDH8A1Q9H2A2 487 aaPredicted RBP10.69□□□□□ -0.7
VPS11-203ENST00000529545 GPHNQ9NQX3 736 aaPredicted RBP10.69□□□□□ -0.7
VPS11-203ENST00000529545 POLR3EQ9NVU0 708 aa10.69□□□□□ -0.7
VPS11-203ENST00000529545 MTCH2Q9Y6C9 303 aa10.69□□□□□ -0.7
VPS11-203ENST00000529545 TNKSO95271 1327 aa10.68□□□□□ -0.7
VPS11-203ENST00000529545 PRDM1O75626 825 aa10.68□□□□□ -0.7
VPS11-203ENST00000529545 CA3P07451 260 aa10.68□□□□□ -0.7
VPS11-203ENST00000529545 RFC2P35250 354 aa10.68□□□□□ -0.7
VPS11-203ENST00000529545 SLC1A4P43007 532 aa10.68□□□□□ -0.7
VPS11-203ENST00000529545 PDE4BQ07343 736 aa10.68□□□□□ -0.7
VPS11-203ENST00000529545 TTLL4Q14679 1199 aa10.68□□□□□ -0.7
VPS11-203ENST00000529545 BRDTQ58F21 947 aaPredicted RBP10.68□□□□□ -0.7
VPS11-203ENST00000529545 RETREG2Q8NC44 543 aa10.68□□□□□ -0.7
VPS11-203ENST00000529545 PHOSPHO2Q8TCD6 241 aa10.68□□□□□ -0.7
VPS11-203ENST00000529545 HLA-CQ95604 372 aa10.68□□□□□ -0.7
VPS11-203ENST00000529545 LRFN3Q9BTN0 628 aa10.68□□□□□ -0.7
VPS11-203ENST00000529545 NACAP1Q9BZK3 213 aa10.68□□□□□ -0.7
VPS11-203ENST00000529545 CERS4Q9HA82 394 aa10.68□□□□□ -0.7
VPS11-203ENST00000529545 VTA1Q9NP79 307 aa10.68□□□□□ -0.7
VPS11-203ENST00000529545 PDGFCQ9NRA1 345 aa10.68□□□□□ -0.7
VPS11-203ENST00000529545 DDX19BQ9UMR2 479 aa10.68□□□□□ -0.7
VPS11-203ENST00000529545 RFXAPO00287 272 aa10.67□□□□□ -0.7
VPS11-203ENST00000529545 ZFYP08048 801 aaPredicted RBP10.67□□□□□ -0.7
VPS11-203ENST00000529545 MYL3P08590 195 aa10.67□□□□□ -0.7
VPS11-203ENST00000529545 CYP2C9P11712 490 aa10.67□□□□□ -0.7
VPS11-203ENST00000529545 CPT1AP50416 773 aa10.67□□□□□ -0.7
VPS11-203ENST00000529545 LRRFIP1Q32MZ4 808 aaKnown RBP10.67□□□□□ -0.7
VPS11-203ENST00000529545 DUSP28Q4G0W2 176 aa10.67□□□□□ -0.7
VPS11-203ENST00000529545 FAM47CQ5HY64 1035 aa10.67□□□□□ -0.7
VPS11-203ENST00000529545 TAPT1Q6NXT6 567 aa10.67□□□□□ -0.7
VPS11-203ENST00000529545 NSMFQ6X4W1 530 aa10.67□□□□□ -0.7
VPS11-203ENST00000529545 FBXO16Q8IX29 292 aaPredicted RBP10.67□□□□□ -0.7
VPS11-203ENST00000529545 NEDD1Q8NHV4 660 aa10.67□□□□□ -0.7
VPS11-203ENST00000529545 ARNTL2Q8WYA1 636 aa10.67□□□□□ -0.7
VPS11-203ENST00000529545 APPBP2Q92624 585 aa10.67□□□□□ -0.7
VPS11-203ENST00000529545 GPATCH3Q96I76 525 aa10.67□□□□□ -0.7
VPS11-203ENST00000529545 GMCL1Q96IK5 515 aa10.67□□□□□ -0.7
VPS11-203ENST00000529545 LRRCC1Q9C099 1032 aa10.67□□□□□ -0.7
VPS11-203ENST00000529545 FTOQ9C0B1 505 aaKnown RBP eCLIP10.67□□□□□ -0.7
VPS11-203ENST00000529545 EPHX3Q9H6B9 360 aa10.67□□□□□ -0.7
VPS11-203ENST00000529545 ECHDC1Q9NTX5 307 aa10.67□□□□□ -0.7
VPS11-203ENST00000529545 TRMT13Q9NUP7 481 aaKnown RBP10.67□□□□□ -0.7
VPS11-203ENST00000529545 ADD3Q9UEY8 706 aaKnown RBP10.67□□□□□ -0.7
VPS11-203ENST00000529545 ZNF536O15090 1300 aa10.66□□□□□ -0.7
VPS11-203ENST00000529545 RAD50Q92878 1312 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms