RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 CCDC194A0A1B0GVG4 234 aa28.27■■■□□ 2.12
LDLRAD3-203ENST00000528989 GCOM1H8Y6P7 765 aaPredicted RBP28.27■■■□□ 2.12
LDLRAD3-203ENST00000528989 POLR2MP0CAP2 368 aa28.27■■■□□ 2.12
LDLRAD3-203ENST00000528989 ERCC3P19447 782 aa28.27■■■□□ 2.12
LDLRAD3-203ENST00000528989 NSMFQ6X4W1 530 aa28.27■■■□□ 2.12
LDLRAD3-203ENST00000528989 CPA4Q9UI42 421 aa28.27■■■□□ 2.12
LDLRAD3-203ENST00000528989 ATP6V1DQ9Y5K8 247 aa28.27■■■□□ 2.12
LDLRAD3-203ENST00000528989 PIK3CDO00329 1044 aa28.27■■■□□ 2.12
LDLRAD3-203ENST00000528989 BAG4O95429 457 aaKnown RBP28.27■■■□□ 2.12
LDLRAD3-203ENST00000528989 INF2Q27J81 1249 aa28.27■■■□□ 2.12
LDLRAD3-203ENST00000528989 GPRC5AQ8NFJ5 357 aa28.27■■■□□ 2.12
LDLRAD3-203ENST00000528989 PURBQ96QR8 312 aaKnown RBP28.27■■■□□ 2.12
LDLRAD3-203ENST00000528989 PORCNQ9H237 461 aa28.27■■■□□ 2.12
LDLRAD3-203ENST00000528989 COL20A1Q9P218 1284 aa28.27■■■□□ 2.12
LDLRAD3-203ENST00000528989 GCLCP48506 637 aaPredicted RBP28.26■■■□□ 2.11
LDLRAD3-203ENST00000528989 GLT8D2Q9H1C3 349 aa28.26■■■□□ 2.11
LDLRAD3-203ENST00000528989 GDPD2Q9HCC8 539 aa28.26■■■□□ 2.11
LDLRAD3-203ENST00000528989 CNPY2Q9Y2B0 182 aa28.26■■■□□ 2.11
LDLRAD3-203ENST00000528989 NCLP19338 710 aaKnown RBP28.25■■■□□ 2.11
LDLRAD3-203ENST00000528989 HSD17B4P51659 736 aa28.25■■■□□ 2.11
LDLRAD3-203ENST00000528989 RPS6P62753 249 aaKnown RBP28.25■■■□□ 2.11
LDLRAD3-203ENST00000528989 USP28Q96RU2 1077 aa28.25■■■□□ 2.11
LDLRAD3-203ENST00000528989 ACAD9Q9H845 621 aa28.25■■■□□ 2.11
LDLRAD3-203ENST00000528989 ZCCHC17Q9NP64 241 aaKnown RBP28.25■■■□□ 2.11
LDLRAD3-203ENST00000528989 BAATQ14032 418 aaPredicted RBP28.25■■■□□ 2.11
LDLRAD3-203ENST00000528989 SLC30A10Q6XR72 485 aa28.25■■■□□ 2.11
LDLRAD3-203ENST00000528989 KRT25Q7Z3Z0 450 aa28.25■■■□□ 2.11
LDLRAD3-203ENST00000528989 MCF2L2Q86YR7 1114 aa28.25■■■□□ 2.11
LDLRAD3-203ENST00000528989 TBCKQ8TEA7 893 aa28.25■■■□□ 2.11
LDLRAD3-203ENST00000528989 GTF3C2Q8WUA4 911 aaPredicted RBP28.25■■■□□ 2.11
LDLRAD3-203ENST00000528989 EFCC1Q9HA90 598 aa28.25■■■□□ 2.11
LDLRAD3-203ENST00000528989 EDIL3O43854 480 aa28.24■■■□□ 2.11
LDLRAD3-203ENST00000528989 CRHR2Q13324 411 aa28.24■■■□□ 2.11
LDLRAD3-203ENST00000528989 NONOQ15233 471 aaKnown RBP eCLIP28.24■■■□□ 2.11
LDLRAD3-203ENST00000528989 TKFCQ3LXA3 575 aa28.24■■■□□ 2.11
LDLRAD3-203ENST00000528989 RNF207Q6ZRF8 634 aa28.24■■■□□ 2.11
LDLRAD3-203ENST00000528989 A1CFQ9NQ94 594 aaKnown RBP28.24■■■□□ 2.11
LDLRAD3-203ENST00000528989 PCDHB6Q9Y5E3 794 aa28.24■■■□□ 2.11
LDLRAD3-203ENST00000528989 CLIC4Q9Y696 253 aa28.24■■■□□ 2.11
LDLRAD3-203ENST00000528989 ADGRA2Q96PE1 1338 aa28.23■■■□□ 2.11
LDLRAD3-203ENST00000528989 CHST13Q8NET6 341 aa28.23■■■□□ 2.11
LDLRAD3-203ENST00000528989 CLEC17AQ6ZS10 378 aa28.23■■■□□ 2.11
LDLRAD3-203ENST00000528989 SYTL5Q8TDW5 730 aaPredicted RBP28.23■■■□□ 2.11
LDLRAD3-203ENST00000528989 ANO3Q9BYT9 981 aa28.23■■■□□ 2.11
LDLRAD3-203ENST00000528989 MORF4L1Q9UBU8 362 aa28.23■■■□□ 2.11
LDLRAD3-203ENST00000528989 SPDYE3A6NKU9 549 aa28.22■■■□□ 2.11
LDLRAD3-203ENST00000528989 TLR2O60603 784 aa28.22■■■□□ 2.11
LDLRAD3-203ENST00000528989 ECM2O94769 699 aaPredicted RBP28.22■■■□□ 2.11
LDLRAD3-203ENST00000528989 WDR78Q5VTH9 848 aa28.22■■■□□ 2.11
LDLRAD3-203ENST00000528989 CYP39A1Q9NYL5 469 aa28.22■■■□□ 2.11
LDLRAD3-203ENST00000528989 SLC25A27O95847 323 aa28.21■■■□□ 2.11
LDLRAD3-203ENST00000528989 GHRHRQ02643 423 aa28.21■■■□□ 2.11
LDLRAD3-203ENST00000528989 RILPL1Q5EBL4 403 aa28.21■■■□□ 2.11
LDLRAD3-203ENST00000528989 UBXN2AP68543 259 aa28.21■■■□□ 2.11
LDLRAD3-203ENST00000528989 AP3B2Q13367 1082 aa28.21■■■□□ 2.11
LDLRAD3-203ENST00000528989 FAM110CQ1W6H9 321 aa28.21■■■□□ 2.11
LDLRAD3-203ENST00000528989 ANKRD35Q8N283 1001 aa28.21■■■□□ 2.11
LDLRAD3-203ENST00000528989 ZFYVE28Q9HCC9 887 aa28.21■■■□□ 2.11
LDLRAD3-203ENST00000528989 FIBPO43427 364 aa28.2■■■□□ 2.1
LDLRAD3-203ENST00000528989 BCRP11274 1271 aa28.2■■■□□ 2.1
LDLRAD3-203ENST00000528989 KRT85P78386 507 aa28.2■■■□□ 2.1
LDLRAD3-203ENST00000528989 ZNF174Q15697 407 aa28.2■■■□□ 2.1
LDLRAD3-203ENST00000528989 C17orf99Q6UX52 265 aa28.2■■■□□ 2.1
LDLRAD3-203ENST00000528989 TAAR1Q96RJ0 339 aa28.2■■■□□ 2.1
LDLRAD3-203ENST00000528989 CA12O43570 354 aa28.19■■■□□ 2.1
LDLRAD3-203ENST00000528989 FOSP01100 380 aaPredicted RBP28.19■■■□□ 2.1
LDLRAD3-203ENST00000528989 SF3A1Q15459 793 aaKnown RBP28.19■■■□□ 2.1
LDLRAD3-203ENST00000528989 LETM2Q2VYF4 491 aa28.19■■■□□ 2.1
LDLRAD3-203ENST00000528989 ZNF396Q96N95 335 aaPredicted RBP28.19■■■□□ 2.1
LDLRAD3-203ENST00000528989 C1QTNF8P60827 252 aa28.19■■■□□ 2.1
LDLRAD3-203ENST00000528989 ANO1Q5XXA6 986 aa28.19■■■□□ 2.1
LDLRAD3-203ENST00000528989 FBXO40Q9UH90 709 aa28.19■■■□□ 2.1
LDLRAD3-203ENST00000528989 MAP2K2P36507 400 aa28.18■■■□□ 2.1
LDLRAD3-203ENST00000528989 CCNA1P78396 465 aa28.18■■■□□ 2.1
LDLRAD3-203ENST00000528989 TTC38Q5R3I4 469 aa28.18■■■□□ 2.1
LDLRAD3-203ENST00000528989 NEK8Q86SG6 692 aa28.18■■■□□ 2.1
LDLRAD3-203ENST00000528989 ZFP91Q96JP5 570 aaPredicted RBP28.18■■■□□ 2.1
LDLRAD3-203ENST00000528989 NOL7Q9UMY1 257 aaKnown RBP28.18■■■□□ 2.1
LDLRAD3-203ENST00000528989 TCHHQ07283 1943 aa28.18■■■□□ 2.1
LDLRAD3-203ENST00000528989 MCM7P33993 719 aa28.17■■■□□ 2.1
LDLRAD3-203ENST00000528989 CNTN2Q02246 1040 aa28.17■■■□□ 2.1
LDLRAD3-203ENST00000528989 CRYGNQ8WXF5 182 aa28.17■■■□□ 2.1
LDLRAD3-203ENST00000528989 GBP4Q96PP9 640 aa28.17■■■□□ 2.1
LDLRAD3-203ENST00000528989 MROH8Q9H579 483 aa28.17■■■□□ 2.1
LDLRAD3-203ENST00000528989 MAP3K20Q9NYL2 800 aaKnown RBP28.17■■■□□ 2.1
LDLRAD3-203ENST00000528989 RTEL1Q9NZ71 1219 aa28.17■■■□□ 2.1
LDLRAD3-203ENST00000528989 CFAP45Q9UL16 551 aa28.17■■■□□ 2.1
LDLRAD3-203ENST00000528989 MRVI1Q9Y6F6 885 aa28.17■■■□□ 2.1
LDLRAD3-203ENST00000528989 DDX49Q9Y6V7 483 aaKnown RBP28.17■■■□□ 2.1
LDLRAD3-203ENST00000528989 SHCBP1Q8NEM2 672 aa28.17■■■□□ 2.1
LDLRAD3-203ENST00000528989 POLR3EQ9NVU0 708 aa28.17■■■□□ 2.1
LDLRAD3-203ENST00000528989 CCNT1O60563 726 aaKnown RBP28.16■■■□□ 2.1
LDLRAD3-203ENST00000528989 PGK2P07205 417 aa28.16■■■□□ 2.1
LDLRAD3-203ENST00000528989 HSPA6P17066 643 aa28.16■■■□□ 2.1
LDLRAD3-203ENST00000528989 SREBF1P36956 1147 aa28.16■■■□□ 2.1
LDLRAD3-203ENST00000528989 TRAPPC10P48553 1259 aa28.16■■■□□ 2.1
LDLRAD3-203ENST00000528989 ARHGAP4P98171 946 aa28.16■■■□□ 2.1
LDLRAD3-203ENST00000528989 CCAR1Q8IX12 1150 aaKnown RBP28.16■■■□□ 2.1
LDLRAD3-203ENST00000528989 TBC1D8O95759 1140 aa28.15■■■□□ 2.1
LDLRAD3-203ENST00000528989 ALDH1A1P00352 501 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms