RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 AAMPQ13685 434 aa10.19□□□□□ -0.78
SSBP3-212ENST00000528930 GRB14Q14449 540 aa10.19□□□□□ -0.78
SSBP3-212ENST00000528930 TSHZ3Q63HK5 1081 aa10.19□□□□□ -0.78
SSBP3-212ENST00000528930 OLFML2BQ68BL8 750 aa10.19□□□□□ -0.78
SSBP3-212ENST00000528930 FOXP4Q8IVH2 680 aaPredicted RBP10.19□□□□□ -0.78
SSBP3-212ENST00000528930 OTUD7AQ8TE49 926 aaPredicted RBP10.19□□□□□ -0.78
SSBP3-212ENST00000528930 RMDN1Q96DB5 314 aa10.19□□□□□ -0.78
SSBP3-212ENST00000528930 CERS4Q9HA82 394 aa10.19□□□□□ -0.78
SSBP3-212ENST00000528930 PI4KBQ9UBF8 816 aa10.19□□□□□ -0.78
SSBP3-212ENST00000528930 HERC5Q9UII4 1024 aaKnown RBP10.19□□□□□ -0.78
SSBP3-212ENST00000528930 ADGRG1Q9Y653 693 aa10.19□□□□□ -0.78
SSBP3-212ENST00000528930 SALL3Q9BXA9 1300 aa10.18□□□□□ -0.78
SSBP3-212ENST00000528930 MYH1P12882 1939 aa10.18□□□□□ -0.78
SSBP3-212ENST00000528930 MAGEB6P1A0A0J9YX57 407 aa10.18□□□□□ -0.78
SSBP3-212ENST00000528930 GLRX3O76003 335 aaKnown RBP10.18□□□□□ -0.78
SSBP3-212ENST00000528930 FGBP02675 491 aa10.18□□□□□ -0.78
SSBP3-212ENST00000528930 CAP2P40123 477 aa10.18□□□□□ -0.78
SSBP3-212ENST00000528930 JAG1P78504 1218 aa10.18□□□□□ -0.78
SSBP3-212ENST00000528930 PRR20EP86478 221 aa10.18□□□□□ -0.78
SSBP3-212ENST00000528930 PRR20CP86479 221 aa10.18□□□□□ -0.78
SSBP3-212ENST00000528930 PRR20DP86480 221 aa10.18□□□□□ -0.78
SSBP3-212ENST00000528930 PRR20BP86481 221 aa10.18□□□□□ -0.78
SSBP3-212ENST00000528930 PRR20AP86496 221 aa10.18□□□□□ -0.78
SSBP3-212ENST00000528930 TAP1Q03518 808 aa10.18□□□□□ -0.78
SSBP3-212ENST00000528930 KMT5BQ4FZB7 885 aa10.18□□□□□ -0.78
SSBP3-212ENST00000528930 SUGP1Q8IWZ8 645 aaKnown RBP10.18□□□□□ -0.78
SSBP3-212ENST00000528930 LCORLQ8N3X6 602 aa10.18□□□□□ -0.78
SSBP3-212ENST00000528930 FBXL6Q8N531 539 aa10.18□□□□□ -0.78
SSBP3-212ENST00000528930 EXOC6Q8TAG9 804 aa10.18□□□□□ -0.78
SSBP3-212ENST00000528930 GTF3C2Q8WUA4 911 aaPredicted RBP10.18□□□□□ -0.78
SSBP3-212ENST00000528930 EDAQ92838 391 aa10.18□□□□□ -0.78
SSBP3-212ENST00000528930 UPF3BQ9BZI7 483 aaKnown RBP10.18□□□□□ -0.78
SSBP3-212ENST00000528930 SAP30BPQ9UHR5 308 aaKnown RBP10.18□□□□□ -0.78
SSBP3-212ENST00000528930 SUPT16HQ9Y5B9 1047 aaKnown RBP10.18□□□□□ -0.78
SSBP3-212ENST00000528930 VPS13AQ96RL7 3174 aa10.18□□□□□ -0.78
SSBP3-212ENST00000528930 MROH7Q68CQ1 1323 aa10.17□□□□□ -0.78
SSBP3-212ENST00000528930 TMEM221A6NGB7 291 aa10.17□□□□□ -0.78
SSBP3-212ENST00000528930 M0R296 226 aa10.17□□□□□ -0.78
SSBP3-212ENST00000528930 ARHGEF15O94989 841 aa10.17□□□□□ -0.78
SSBP3-212ENST00000528930 USP5P45974 858 aa10.17□□□□□ -0.78
SSBP3-212ENST00000528930 UBE3CQ15386 1083 aa10.17□□□□□ -0.78
SSBP3-212ENST00000528930 TMEM67Q5HYA8 995 aa10.17□□□□□ -0.78
SSBP3-212ENST00000528930 OTOP2Q7RTS6 562 aa10.17□□□□□ -0.78
SSBP3-212ENST00000528930 ADHFE1Q8IWW8 467 aa10.17□□□□□ -0.78
SSBP3-212ENST00000528930 CCAR1Q8IX12 1150 aaKnown RBP10.17□□□□□ -0.78
SSBP3-212ENST00000528930 PI4K2BQ8TCG2 481 aa10.17□□□□□ -0.78
SSBP3-212ENST00000528930 NEK9Q8TD19 979 aa10.17□□□□□ -0.78
SSBP3-212ENST00000528930 ARNTL2Q8WYA1 636 aa10.17□□□□□ -0.78
SSBP3-212ENST00000528930 PBXIP1Q96AQ6 731 aa10.17□□□□□ -0.78
SSBP3-212ENST00000528930 MUTYHQ9UIF7 546 aa10.17□□□□□ -0.78
SSBP3-212ENST00000528930 SLC4A7Q9Y6M7 1214 aa10.17□□□□□ -0.78
SSBP3-212ENST00000528930 MYH7P12883 1935 aa10.17□□□□□ -0.78
SSBP3-212ENST00000528930 TANC1Q9C0D5 1861 aa10.17□□□□□ -0.78
SSBP3-212ENST00000528930 EP300Q09472 2414 aaPredicted RBP10.16□□□□□ -0.78
SSBP3-212ENST00000528930 TTC41PQ6P2S7 1318 aa10.16□□□□□ -0.78
SSBP3-212ENST00000528930 PRKAB2O43741 272 aa10.16□□□□□ -0.78
SSBP3-212ENST00000528930 IGHDP01880 384 aa10.16□□□□□ -0.78
SSBP3-212ENST00000528930 CDK7P50613 346 aa10.16□□□□□ -0.78
SSBP3-212ENST00000528930 PLCD1P51178 756 aa10.16□□□□□ -0.78
SSBP3-212ENST00000528930 VCPP55072 806 aaKnown RBP10.16□□□□□ -0.78
SSBP3-212ENST00000528930 SHROOM1Q2M3G4 852 aaPredicted RBP10.16□□□□□ -0.78
SSBP3-212ENST00000528930 ANKRD45Q5TZF3 282 aa10.16□□□□□ -0.78
SSBP3-212ENST00000528930 TATDN1Q6P1N9 297 aa10.16□□□□□ -0.78
SSBP3-212ENST00000528930 KBTBD3Q8NAB2 608 aa10.16□□□□□ -0.78
SSBP3-212ENST00000528930 SDR42E1Q8WUS8 393 aa10.16□□□□□ -0.78
SSBP3-212ENST00000528930 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.16□□□□□ -0.78
SSBP3-212ENST00000528930 PUS7LQ9H0K6 701 aaKnown RBP10.16□□□□□ -0.78
SSBP3-212ENST00000528930 EHD4Q9H223 541 aa10.16□□□□□ -0.78
SSBP3-212ENST00000528930 ARMT1Q9H993 441 aa10.16□□□□□ -0.78
SSBP3-212ENST00000528930 DCP1AQ9NPI6 582 aaPredicted RBP10.16□□□□□ -0.78
SSBP3-212ENST00000528930 XPNPEP3Q9NQH7 507 aa10.16□□□□□ -0.78
SSBP3-212ENST00000528930 RALYQ9UKM9 306 aaKnown RBP10.16□□□□□ -0.78
SSBP3-212ENST00000528930 SPTBN2O15020 2390 aa10.16□□□□□ -0.78
SSBP3-212ENST00000528930 H0Y858 1186 aa10.15□□□□□ -0.78
SSBP3-212ENST00000528930 CNMDO75829 334 aa10.15□□□□□ -0.78
SSBP3-212ENST00000528930 MBD4O95243 580 aa10.15□□□□□ -0.78
SSBP3-212ENST00000528930 ADH1BP00325 375 aa10.15□□□□□ -0.78
SSBP3-212ENST00000528930 HLA-DOAP06340 250 aa10.15□□□□□ -0.78
SSBP3-212ENST00000528930 ATP2A2P16615 1042 aaKnown RBP10.15□□□□□ -0.78
SSBP3-212ENST00000528930 FOXC1Q12948 553 aa10.15□□□□□ -0.78
SSBP3-212ENST00000528930 ZSCAN25Q6NSZ9 544 aa10.15□□□□□ -0.78
SSBP3-212ENST00000528930 RNF180Q86T96 592 aa10.15□□□□□ -0.78
SSBP3-212ENST00000528930 TTC6Q86TZ1 520 aa10.15□□□□□ -0.78
SSBP3-212ENST00000528930 SMC5Q8IY18 1101 aa10.15□□□□□ -0.78
SSBP3-212ENST00000528930 ADSSL1Q8N142 457 aa10.15□□□□□ -0.78
SSBP3-212ENST00000528930 CRACR2BQ8N4Y2 399 aaPredicted RBP10.15□□□□□ -0.78
SSBP3-212ENST00000528930 VWCEQ96DN2 955 aa10.15□□□□□ -0.78
SSBP3-212ENST00000528930 GPATCH3Q96I76 525 aa10.15□□□□□ -0.78
SSBP3-212ENST00000528930 TSEN34Q9BSV6 310 aaKnown RBP10.15□□□□□ -0.78
SSBP3-212ENST00000528930 PAGR1Q9BTK6 254 aa10.15□□□□□ -0.78
SSBP3-212ENST00000528930 CRNKL1Q9BZJ0 848 aaKnown RBP10.15□□□□□ -0.78
SSBP3-212ENST00000528930 PPP1R12CQ9BZL4 782 aa10.15□□□□□ -0.78
SSBP3-212ENST00000528930 STARD7Q9NQZ5 370 aa10.15□□□□□ -0.78
SSBP3-212ENST00000528930 TLR9Q9NR96 1032 aa10.15□□□□□ -0.78
SSBP3-212ENST00000528930 NAV1Q8NEY1 1877 aa10.15□□□□□ -0.79
SSBP3-212ENST00000528930 USP17L5A8MUK1 530 aa10.14□□□□□ -0.79
SSBP3-212ENST00000528930 ADAMTS4O75173 837 aa10.14□□□□□ -0.79
SSBP3-212ENST00000528930 GDF11O95390 407 aa10.14□□□□□ -0.79
SSBP3-212ENST00000528930 ASNSP08243 561 aa10.14□□□□□ -0.79
SSBP3-212ENST00000528930 MX1P20591 662 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms