RNA–Protein interactions for RNA: ENST00000527891.5

ATM-213, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-213ENST00000527891 PTPDC1A2A3K4 754 aa20.25■□□□□ 0.83
ATM-213ENST00000527891 DUSP28Q4G0W2 176 aa20.25■□□□□ 0.83
ATM-213ENST00000527891 AKNAD1Q5T1N1 836 aa20.25■□□□□ 0.83
ATM-213ENST00000527891 MFSD6Q6ZSS7 791 aa20.25■□□□□ 0.83
ATM-213ENST00000527891 RILPL2Q969X0 211 aa20.25■□□□□ 0.83
ATM-213ENST00000527891 IL23AQ9NPF7 189 aa20.25■□□□□ 0.83
ATM-213ENST00000527891 B4GALT4O60513 344 aa20.24■□□□□ 0.83
ATM-213ENST00000527891 MFAP1P55081 439 aaKnown RBP20.24■□□□□ 0.83
ATM-213ENST00000527891 PSMC6P62333 389 aa20.24■□□□□ 0.83
ATM-213ENST00000527891 ZNF543Q08ER8 600 aa20.24■□□□□ 0.83
ATM-213ENST00000527891 SLC30A10Q6XR72 485 aa20.24■□□□□ 0.83
ATM-213ENST00000527891 TBC1D10CQ8IV04 446 aa20.24■□□□□ 0.83
ATM-213ENST00000527891 PBX4Q9BYU1 374 aa20.24■□□□□ 0.83
ATM-213ENST00000527891 RNF41Q9H4P4 317 aaPredicted RBP20.24■□□□□ 0.83
ATM-213ENST00000527891 CUL9Q8IWT3 2517 aa20.23■□□□□ 0.83
ATM-213ENST00000527891 GRXCR1A8MXD5 290 aa20.23■□□□□ 0.83
ATM-213ENST00000527891 SNHG28P0DPA3 235 aa20.23■□□□□ 0.83
ATM-213ENST00000527891 CALML3P27482 149 aa20.23■□□□□ 0.83
ATM-213ENST00000527891 PBX2P40425 430 aa20.23■□□□□ 0.83
ATM-213ENST00000527891 AAMPQ13685 434 aa20.23■□□□□ 0.83
ATM-213ENST00000527891 RNF207Q6ZRF8 634 aa20.23■□□□□ 0.83
ATM-213ENST00000527891 CLEC4DQ8WXI8 215 aa20.23■□□□□ 0.83
ATM-213ENST00000527891 HERVK_113Q902F9 699 aa20.23■□□□□ 0.83
ATM-213ENST00000527891 WDR11Q9BZH6 1224 aa20.23■□□□□ 0.83
ATM-213ENST00000527891 TRPV6Q9H1D0 765 aa20.23■□□□□ 0.83
ATM-213ENST00000527891 MTIF3Q9H2K0 278 aaKnown RBP20.23■□□□□ 0.83
ATM-213ENST00000527891 UMODL1Q5DID0 1318 aa20.23■□□□□ 0.83
ATM-213ENST00000527891 WDR19Q8NEZ3 1342 aa20.23■□□□□ 0.83
ATM-213ENST00000527891 SPTBN5Q9NRC6 3674 aaKnown RBP20.22■□□□□ 0.83
ATM-213ENST00000527891 SMC5Q8IY18 1101 aa20.22■□□□□ 0.83
ATM-213ENST00000527891 ESR2Q92731 530 aa20.22■□□□□ 0.83
ATM-213ENST00000527891 MPHOSPH6Q99547 160 aaKnown RBP20.22■□□□□ 0.83
ATM-213ENST00000527891 NOC4LQ9BVI4 516 aaKnown RBP20.22■□□□□ 0.83
ATM-213ENST00000527891 POLR3EQ9NVU0 708 aa20.22■□□□□ 0.83
ATM-213ENST00000527891 RBM47A0AV96 593 aaKnown RBP20.21■□□□□ 0.83
ATM-213ENST00000527891 FGBP02675 491 aa20.21■□□□□ 0.83
ATM-213ENST00000527891 SDSP20132 328 aa20.21■□□□□ 0.83
ATM-213ENST00000527891 CPT1AP50416 773 aa20.21■□□□□ 0.83
ATM-213ENST00000527891 CCL23P55773 120 aa20.21■□□□□ 0.83
ATM-213ENST00000527891 RPS6P62753 249 aaKnown RBP20.21■□□□□ 0.83
ATM-213ENST00000527891 GPATCH4Q5T3I0 446 aaKnown RBP20.21■□□□□ 0.83
ATM-213ENST00000527891 B4GALNT3Q6L9W6 998 aa20.21■□□□□ 0.83
ATM-213ENST00000527891 NEDD4P46934 1319 aa20.21■□□□□ 0.83
ATM-213ENST00000527891 ZNF213O14771 459 aa20.2■□□□□ 0.82
ATM-213ENST00000527891 NT5C2P49902 561 aa20.2■□□□□ 0.82
ATM-213ENST00000527891 PDE4DQ08499 809 aa20.2■□□□□ 0.82
ATM-213ENST00000527891 RAB30Q15771 203 aa20.2■□□□□ 0.82
ATM-213ENST00000527891 DNERQ8NFT8 737 aa20.2■□□□□ 0.82
ATM-213ENST00000527891 OR6J1Q8NGC5 347 aa20.2■□□□□ 0.82
ATM-213ENST00000527891 WNT8AQ9H1J5 351 aa20.2■□□□□ 0.82
ATM-213ENST00000527891 ALDH8A1Q9H2A2 487 aaPredicted RBP20.2■□□□□ 0.82
ATM-213ENST00000527891 RWDD1Q9H446 243 aaPredicted RBP20.2■□□□□ 0.82
ATM-213ENST00000527891 CXXC1Q9P0U4 656 aaPredicted RBP20.2■□□□□ 0.82
ATM-213ENST00000527891 NKRFO15226 690 aaKnown RBP eCLIP20.19■□□□□ 0.82
ATM-213ENST00000527891 MYL3P08590 195 aa20.19■□□□□ 0.82
ATM-213ENST00000527891 EDNRBP24530 442 aa20.19■□□□□ 0.82
ATM-213ENST00000527891 PURAQ00577 322 aaKnown RBP20.19■□□□□ 0.82
ATM-213ENST00000527891 PPP2R5BQ15173 497 aa20.19■□□□□ 0.82
ATM-213ENST00000527891 OTOP2Q7RTS6 562 aa20.19■□□□□ 0.82
ATM-213ENST00000527891 CHD1LQ86WJ1 897 aa20.19■□□□□ 0.82
ATM-213ENST00000527891 DGKHQ86XP1 1220 aa20.19■□□□□ 0.82
ATM-213ENST00000527891 GAS2L1Q99501 681 aaPredicted RBP20.19■□□□□ 0.82
ATM-213ENST00000527891 ZKSCAN3Q9BRR0 538 aa20.19■□□□□ 0.82
ATM-213ENST00000527891 OSBPL3Q9H4L5 887 aa20.19■□□□□ 0.82
ATM-213ENST00000527891 MSRAQ9UJ68 235 aa20.19■□□□□ 0.82
ATM-213ENST00000527891 RAD50Q92878 1312 aa20.19■□□□□ 0.82
ATM-213ENST00000527891 SUPT20HL2P0C7V6 817 aa20.18■□□□□ 0.82
ATM-213ENST00000527891 GOLGA8HP0CJ92 632 aa20.18■□□□□ 0.82
ATM-213ENST00000527891 USH1GQ495M9 461 aa20.18■□□□□ 0.82
ATM-213ENST00000527891 BRDTQ58F21 947 aaPredicted RBP20.18■□□□□ 0.82
ATM-213ENST00000527891 IQCA1Q86XH1 822 aa20.18■□□□□ 0.82
ATM-213ENST00000527891 PLEKHM2Q8IWE5 1019 aa20.18■□□□□ 0.82
ATM-213ENST00000527891 RPUSD2Q8IZ73 545 aaKnown RBP20.18■□□□□ 0.82
ATM-213ENST00000527891 USP38Q8NB14 1042 aa20.18■□□□□ 0.82
ATM-213ENST00000527891 SCFD2Q8WU76 684 aa20.18■□□□□ 0.82
ATM-213ENST00000527891 MTG1Q9BT17 334 aaPredicted RBP20.18■□□□□ 0.82
ATM-213ENST00000527891 GPHNQ9NQX3 736 aaPredicted RBP20.18■□□□□ 0.82
ATM-213ENST00000527891 B4DLN1 442 aa20.17■□□□□ 0.82
ATM-213ENST00000527891 MRPL12P52815 198 aaKnown RBP20.17■□□□□ 0.82
ATM-213ENST00000527891 CCDC178Q5BJE1 867 aa20.17■□□□□ 0.82
ATM-213ENST00000527891 CWC27Q6UX04 472 aaKnown RBP20.17■□□□□ 0.82
ATM-213ENST00000527891 PNMA1Q8ND90 353 aa20.17■□□□□ 0.82
ATM-213ENST00000527891 DIAPH3Q9NSV4 1193 aa20.17■□□□□ 0.82
ATM-213ENST00000527891 TRMT13Q9NUP7 481 aaKnown RBP20.17■□□□□ 0.82
ATM-213ENST00000527891 TNKSO95271 1327 aa20.17■□□□□ 0.82
ATM-213ENST00000527891 KDM4AO75164 1064 aa20.16■□□□□ 0.82
ATM-213ENST00000527891 NUCB1Q02818 461 aa20.16■□□□□ 0.82
ATM-213ENST00000527891 RGS22Q8NE09 1264 aa20.16■□□□□ 0.82
ATM-213ENST00000527891 SCLYQ96I15 445 aa20.16■□□□□ 0.82
ATM-213ENST00000527891 UBA5Q9GZZ9 404 aa20.16■□□□□ 0.82
ATM-213ENST00000527891 CPVLQ9H3G5 476 aa20.16■□□□□ 0.82
ATM-213ENST00000527891 PRDM12Q9H4Q4 367 aa20.16■□□□□ 0.82
ATM-213ENST00000527891 KAT14Q9H8E8 782 aa20.16■□□□□ 0.82
ATM-213ENST00000527891 HIP1O00291 1037 aa20.15■□□□□ 0.82
ATM-213ENST00000527891 KPNA6O60684 536 aa20.15■□□□□ 0.82
ATM-213ENST00000527891 PFKMP08237 780 aa20.15■□□□□ 0.82
ATM-213ENST00000527891 CYP2C9P11712 490 aa20.15■□□□□ 0.82
ATM-213ENST00000527891 CDC37Q16543 378 aaPredicted RBP20.15■□□□□ 0.82
ATM-213ENST00000527891 SYMPKQ92797 1274 aaKnown RBP20.15■□□□□ 0.82
ATM-213ENST00000527891 MAF1Q9H063 256 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms