RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 NCOA7Q8NI08 942 aa22.49■■□□□ 1.19
CAPN1-211ENST00000527739 BADQ92934 168 aa22.49■■□□□ 1.19
CAPN1-211ENST00000527739 TRIM43Q96BQ3 446 aaPredicted RBP22.49■■□□□ 1.19
CAPN1-211ENST00000527739 MPHOSPH6Q99547 160 aaKnown RBP22.49■■□□□ 1.19
CAPN1-211ENST00000527739 VTA1Q9NP79 307 aa22.49■■□□□ 1.19
CAPN1-211ENST00000527739 UNC80Q8N2C7 3258 aa22.48■■□□□ 1.19
CAPN1-211ENST00000527739 DCDC2CA8MYV0 355 aa22.48■■□□□ 1.19
CAPN1-211ENST00000527739 CLTBP09497 229 aa22.48■■□□□ 1.19
CAPN1-211ENST00000527739 PTGS1P23219 599 aa22.48■■□□□ 1.19
CAPN1-211ENST00000527739 CST5P28325 142 aaPredicted RBP22.48■■□□□ 1.19
CAPN1-211ENST00000527739 PDE4DQ08499 809 aa22.48■■□□□ 1.19
CAPN1-211ENST00000527739 SEC23AQ15436 765 aa22.48■■□□□ 1.19
CAPN1-211ENST00000527739 SHHQ15465 462 aa22.48■■□□□ 1.19
CAPN1-211ENST00000527739 QRICH1Q2TAL8 776 aa22.48■■□□□ 1.19
CAPN1-211ENST00000527739 TAPT1Q6NXT6 567 aa22.48■■□□□ 1.19
CAPN1-211ENST00000527739 CENPQQ7L2Z9 268 aaPredicted RBP22.48■■□□□ 1.19
CAPN1-211ENST00000527739 TMEM39AQ9NV64 488 aa22.48■■□□□ 1.19
CAPN1-211ENST00000527739 RBM8AQ9Y5S9 174 aaKnown RBP22.48■■□□□ 1.19
CAPN1-211ENST00000527739 TAF6LQ9Y6J9 622 aa22.48■■□□□ 1.19
CAPN1-211ENST00000527739 KLRF2D3W0D1 207 aa22.47■■□□□ 1.19
CAPN1-211ENST00000527739 SART3Q15020 963 aaKnown RBP22.47■■□□□ 1.19
CAPN1-211ENST00000527739 FAM109BQ6ICB4 259 aaPredicted RBP22.47■■□□□ 1.19
CAPN1-211ENST00000527739 SKAP1Q86WV1 359 aa22.47■■□□□ 1.19
CAPN1-211ENST00000527739 FBXO11Q86XK2 927 aa22.47■■□□□ 1.19
CAPN1-211ENST00000527739 STAG2Q8N3U4 1231 aa22.47■■□□□ 1.19
CAPN1-211ENST00000527739 MAP4K1Q92918 833 aa22.47■■□□□ 1.19
CAPN1-211ENST00000527739 JMJD4Q9H9V9 463 aa22.47■■□□□ 1.19
CAPN1-211ENST00000527739 GNEQ9Y223 722 aaKnown RBP22.47■■□□□ 1.19
CAPN1-211ENST00000527739 ABCB11O95342 1321 aa22.47■■□□□ 1.19
CAPN1-211ENST00000527739 B4DLN1 442 aa22.46■■□□□ 1.19
CAPN1-211ENST00000527739 ZEB2O60315 1214 aa22.46■■□□□ 1.19
CAPN1-211ENST00000527739 RAG1P15918 1043 aa22.46■■□□□ 1.19
CAPN1-211ENST00000527739 MRPL12P52815 198 aaKnown RBP22.46■■□□□ 1.19
CAPN1-211ENST00000527739 WTAPQ15007 396 aa22.46■■□□□ 1.19
CAPN1-211ENST00000527739 TMEM63BQ5T3F8 832 aa22.46■■□□□ 1.19
CAPN1-211ENST00000527739 MORC4Q8TE76 937 aa22.46■■□□□ 1.19
CAPN1-211ENST00000527739 WDR11Q9BZH6 1224 aa22.46■■□□□ 1.19
CAPN1-211ENST00000527739 ELP1O95163 1332 aa22.46■■□□□ 1.19
CAPN1-211ENST00000527739 A0A0U1RQG5 324 aaPredicted RBP22.45■■□□□ 1.18
CAPN1-211ENST00000527739 FSCN1Q16658 493 aaKnown RBP22.45■■□□□ 1.18
CAPN1-211ENST00000527739 TMEM67Q5HYA8 995 aa22.45■■□□□ 1.18
CAPN1-211ENST00000527739 CXCL17Q6UXB2 119 aa22.45■■□□□ 1.18
CAPN1-211ENST00000527739 STOX1Q6ZVD7 989 aa22.45■■□□□ 1.18
CAPN1-211ENST00000527739 TBC1D5Q92609 795 aa22.45■■□□□ 1.18
CAPN1-211ENST00000527739 MRPL11Q9Y3B7 192 aaKnown RBP22.45■■□□□ 1.18
CAPN1-211ENST00000527739 CTAGE5O15320 804 aa22.44■■□□□ 1.18
CAPN1-211ENST00000527739 ITGB8P26012 769 aa22.44■■□□□ 1.18
CAPN1-211ENST00000527739 MCF2L2Q86YR7 1114 aa22.44■■□□□ 1.18
CAPN1-211ENST00000527739 RGS22Q8NE09 1264 aa22.44■■□□□ 1.18
CAPN1-211ENST00000527739 DNERQ8NFT8 737 aa22.44■■□□□ 1.18
CAPN1-211ENST00000527739 TOX2Q96NM4 488 aa22.44■■□□□ 1.18
CAPN1-211ENST00000527739 SENP2Q9HC62 589 aa22.44■■□□□ 1.18
CAPN1-211ENST00000527739 MAD2L2Q9UI95 211 aa22.44■■□□□ 1.18
CAPN1-211ENST00000527739 LOC102724159A0A0B4J2E5 919 aa22.43■■□□□ 1.18
CAPN1-211ENST00000527739 FAAP100Q0VG06 881 aa22.43■■□□□ 1.18
CAPN1-211ENST00000527739 PWP2Q15269 919 aaKnown RBP22.43■■□□□ 1.18
CAPN1-211ENST00000527739 ANKRD33Q7Z3H0 272 aa22.43■■□□□ 1.18
CAPN1-211ENST00000527739 ESYT1Q9BSJ8 1104 aa22.43■■□□□ 1.18
CAPN1-211ENST00000527739 AMNQ9BXJ7 453 aa22.43■■□□□ 1.18
CAPN1-211ENST00000527739 Q9Y3F1 56 aa22.43■■□□□ 1.18
CAPN1-211ENST00000527739 CUL9Q8IWT3 2517 aa22.43■■□□□ 1.18
CAPN1-211ENST00000527739 LAMA4Q16363 1823 aa22.43■■□□□ 1.18
CAPN1-211ENST00000527739 MROH7Q68CQ1 1323 aa22.42■■□□□ 1.18
CAPN1-211ENST00000527739 ARVCFO00192 962 aa22.42■■□□□ 1.18
CAPN1-211ENST00000527739 DUSP28Q4G0W2 176 aa22.42■■□□□ 1.18
CAPN1-211ENST00000527739 CATIPQ7Z7H3 387 aa22.42■■□□□ 1.18
CAPN1-211ENST00000527739 HOMER1Q86YM7 354 aa22.42■■□□□ 1.18
CAPN1-211ENST00000527739 TAAR1Q96RJ0 339 aa22.42■■□□□ 1.18
CAPN1-211ENST00000527739 ANO2Q9NQ90 1003 aa22.42■■□□□ 1.18
CAPN1-211ENST00000527739 MCM3APO60318 1980 aa22.41■■□□□ 1.18
CAPN1-211ENST00000527739 PALM3A6NDB9 673 aaPredicted RBP22.41■■□□□ 1.18
CAPN1-211ENST00000527739 KIAA0355O15063 1070 aa22.41■■□□□ 1.18
CAPN1-211ENST00000527739 TLR3O15455 904 aaKnown RBP22.41■■□□□ 1.18
CAPN1-211ENST00000527739 CABYRO75952 493 aa22.41■■□□□ 1.18
CAPN1-211ENST00000527739 CFBP00751 764 aa22.41■■□□□ 1.18
CAPN1-211ENST00000527739 NKX3-2P78367 333 aa22.41■■□□□ 1.18
CAPN1-211ENST00000527739 GRM4Q14833 912 aa22.41■■□□□ 1.18
CAPN1-211ENST00000527739 ZNF697Q5TEC3 545 aa22.41■■□□□ 1.18
CAPN1-211ENST00000527739 CASC1Q6TDU7 716 aa22.41■■□□□ 1.18
CAPN1-211ENST00000527739 OR6J1Q8NGC5 347 aa22.41■■□□□ 1.18
CAPN1-211ENST00000527739 SYTL5Q8TDW5 730 aaPredicted RBP22.41■■□□□ 1.18
CAPN1-211ENST00000527739 LSG1Q9H089 658 aaKnown RBP22.41■■□□□ 1.18
CAPN1-211ENST00000527739 EYSQ5T1H1 3165 aa22.4■■□□□ 1.18
CAPN1-211ENST00000527739 ZBTB5O15062 677 aa22.4■■□□□ 1.18
CAPN1-211ENST00000527739 CDK7P50613 346 aa22.4■■□□□ 1.18
CAPN1-211ENST00000527739 EPHB4P54760 987 aa22.4■■□□□ 1.18
CAPN1-211ENST00000527739 ANTXR2P58335 489 aa22.4■■□□□ 1.18
CAPN1-211ENST00000527739 PPP2R5BQ15173 497 aa22.4■■□□□ 1.18
CAPN1-211ENST00000527739 NSUN6Q8TEA1 469 aaKnown RBP22.4■■□□□ 1.18
CAPN1-211ENST00000527739 PIBF1Q8WXW3 757 aa22.4■■□□□ 1.18
CAPN1-211ENST00000527739 PCDHA1Q9Y5I3 950 aa22.4■■□□□ 1.18
CAPN1-211ENST00000527739 CDH23Q9H251 3354 aa22.39■■□□□ 1.17
CAPN1-211ENST00000527739 MYL3P08590 195 aa22.39■■□□□ 1.17
CAPN1-211ENST00000527739 TXNP10599 105 aaKnown RBP22.39■■□□□ 1.17
CAPN1-211ENST00000527739 PSMC6P62333 389 aa22.39■■□□□ 1.17
CAPN1-211ENST00000527739 ITGA7Q13683 1181 aa22.39■■□□□ 1.17
CAPN1-211ENST00000527739 BMP2KLQ5H9B9 411 aa22.39■■□□□ 1.17
CAPN1-211ENST00000527739 ARHGEF16Q5VV41 709 aa22.39■■□□□ 1.17
CAPN1-211ENST00000527739 NFXL1Q6ZNB6 911 aa22.39■■□□□ 1.17
CAPN1-211ENST00000527739 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms