RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 PCDHA11Q9Y5I1 949 aa11.76□□□□□ -0.53
CAPN1-210ENST00000527699 UMODL1Q5DID0 1318 aa11.76□□□□□ -0.53
CAPN1-210ENST00000527699 ROBO3Q96MS0 1386 aa11.76□□□□□ -0.53
CAPN1-210ENST00000527699 GREB1LQ9C091 1923 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-210ENST00000527699 A0A0U1RQG5 324 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-210ENST00000527699 MED19A0JLT2 244 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-210ENST00000527699 EPOPA6NHQ4 379 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 ARVCFO00192 962 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 CTAGE5O15320 804 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 GNAT2P19087 354 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 KCNA5P22460 613 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 SLC16A2P36021 539 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 SLC1A4P43007 532 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 CDK7P50613 346 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 GJA9P57773 515 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 PDE4BQ07343 736 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 TCF15Q12870 199 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 CCDC96Q2M329 555 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 TTBK2Q6IQ55 1244 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 PTCRAQ6ISU1 281 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-210ENST00000527699 GIMAP6Q6P9H5 292 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 NSMFQ6X4W1 530 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 FBXO16Q8IX29 292 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-210ENST00000527699 CHST13Q8NET6 341 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 NEDD1Q8NHV4 660 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 MKL1Q969V6 931 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 TOX2Q96NM4 488 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 CNTNAP3BQ96NU0 1288 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 CNTNAP3Q9BZ76 1288 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 ABHD16BQ9H3Z7 469 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 UBE2ZQ9H832 354 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-210ENST00000527699 ACAD9Q9H845 621 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 IL23AQ9NPF7 189 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 A1CFQ9NQ94 594 aaKnown RBP11.75□□□□□ -0.53
CAPN1-210ENST00000527699 TOMM22Q9NS69 142 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 TBX21Q9UL17 535 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 STX8Q9UNK0 236 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 SLC4A7Q9Y6M7 1214 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 MYH4Q9Y623 1939 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 ASTN1O14525 1302 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 ZNF536O15090 1300 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 ATRXP46100 2492 aa11.75□□□□□ -0.53
CAPN1-210ENST00000527699 POTEB3A0JP26 581 aa11.74□□□□□ -0.53
CAPN1-210ENST00000527699 TSPY2A6NKD2 308 aa11.74□□□□□ -0.53
CAPN1-210ENST00000527699 ATP2A1O14983 1001 aa11.74□□□□□ -0.53
CAPN1-210ENST00000527699 TLR3O15455 904 aaKnown RBP11.74□□□□□ -0.53
CAPN1-210ENST00000527699 RANBP6O60518 1105 aaKnown RBP11.74□□□□□ -0.53
CAPN1-210ENST00000527699 CA3P07451 260 aa11.74□□□□□ -0.53
CAPN1-210ENST00000527699 ZFYP08048 801 aaPredicted RBP11.74□□□□□ -0.53
CAPN1-210ENST00000527699 SMPD1P17405 629 aa11.74□□□□□ -0.53
CAPN1-210ENST00000527699 STAT2P52630 851 aa11.74□□□□□ -0.53
CAPN1-210ENST00000527699 COL9A2Q14055 689 aaPredicted RBP11.74□□□□□ -0.53
CAPN1-210ENST00000527699 TMEM67Q5HYA8 995 aa11.74□□□□□ -0.53
CAPN1-210ENST00000527699 RRP12Q5JTH9 1297 aaKnown RBP11.74□□□□□ -0.53
CAPN1-210ENST00000527699 VPS53Q5VIR6 699 aa11.74□□□□□ -0.53
CAPN1-210ENST00000527699 POTEBQ6S5H4 581 aa11.74□□□□□ -0.53
CAPN1-210ENST00000527699 TLK2Q86UE8 772 aa11.74□□□□□ -0.53
CAPN1-210ENST00000527699 SUGP1Q8IWZ8 645 aaKnown RBP11.74□□□□□ -0.53
CAPN1-210ENST00000527699 MSL3Q8N5Y2 521 aaKnown RBP11.74□□□□□ -0.53
CAPN1-210ENST00000527699 PCSK9Q8NBP7 692 aaKnown RBP11.74□□□□□ -0.53
CAPN1-210ENST00000527699 GMCL1P1Q8NEA9 526 aa11.74□□□□□ -0.53
CAPN1-210ENST00000527699 STAG1Q8WVM7 1258 aa11.74□□□□□ -0.53
CAPN1-210ENST00000527699 NACAP1Q9BZK3 213 aa11.74□□□□□ -0.53
CAPN1-210ENST00000527699 KATNBL1Q9H079 304 aa11.74□□□□□ -0.53
CAPN1-210ENST00000527699 TRPV6Q9H1D0 765 aa11.74□□□□□ -0.53
CAPN1-210ENST00000527699 UPF3AQ9H1J1 476 aaKnown RBP11.74□□□□□ -0.53
CAPN1-210ENST00000527699 ZNF287Q9HBT7 754 aa11.74□□□□□ -0.53
CAPN1-210ENST00000527699 FBXO40Q9UH90 709 aa11.74□□□□□ -0.53
CAPN1-210ENST00000527699 PCDHB15Q9Y5E8 787 aa11.74□□□□□ -0.53
CAPN1-210ENST00000527699 FRMPD2Q68DX3 1309 aaPredicted RBP11.74□□□□□ -0.53
CAPN1-210ENST00000527699 MCM3APO60318 1980 aa11.73□□□□□ -0.53
CAPN1-210ENST00000527699 ELP1O95163 1332 aa11.73□□□□□ -0.53
CAPN1-210ENST00000527699 ZMYM1Q5SVZ6 1142 aa11.73□□□□□ -0.53
CAPN1-210ENST00000527699 ZNF467Q7Z7K2 595 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-210ENST00000527699 FAM126BQ8IXS8 530 aa11.73□□□□□ -0.53
CAPN1-210ENST00000527699 PI4K2BQ8TCG2 481 aa11.73□□□□□ -0.53
CAPN1-210ENST00000527699 CHURC1Q8WUH1 139 aa11.73□□□□□ -0.53
CAPN1-210ENST00000527699 SCLYQ96I15 445 aa11.73□□□□□ -0.53
CAPN1-210ENST00000527699 AP5M1Q9H0R1 490 aa11.73□□□□□ -0.53
CAPN1-210ENST00000527699 GPCPD1Q9NPB8 672 aa11.73□□□□□ -0.53
CAPN1-210ENST00000527699 IL17RBQ9NRM6 502 aa11.73□□□□□ -0.53
CAPN1-210ENST00000527699 CCPG1Q9ULG6 757 aa11.73□□□□□ -0.53
CAPN1-210ENST00000527699 PRR12Q9ULL5 1215 aa11.73□□□□□ -0.53
CAPN1-210ENST00000527699 KMT2BQ9UMN6 2715 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-210ENST00000527699 CACNA1HO95180 2353 aa11.72□□□□□ -0.53
CAPN1-210ENST00000527699 FOXP2O15409 715 aa11.72□□□□□ -0.53
CAPN1-210ENST00000527699 RGS20O76081 388 aa11.72□□□□□ -0.53
CAPN1-210ENST00000527699 SLC3A2P08195 630 aaKnown RBP11.72□□□□□ -0.53
CAPN1-210ENST00000527699 ATP2A2P16615 1042 aaKnown RBP11.72□□□□□ -0.53
CAPN1-210ENST00000527699 CST5P28325 142 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-210ENST00000527699 CHMP4BP1P59074 171 aa11.72□□□□□ -0.53
CAPN1-210ENST00000527699 GRB10Q13322 594 aa11.72□□□□□ -0.53
CAPN1-210ENST00000527699 ITGA7Q13683 1181 aa11.72□□□□□ -0.53
CAPN1-210ENST00000527699 LEXMQ3ZCV2 418 aa11.72□□□□□ -0.53
CAPN1-210ENST00000527699 RCSD1Q6JBY9 416 aa11.72□□□□□ -0.53
CAPN1-210ENST00000527699 KIAA1211Q6ZU35 1233 aa11.72□□□□□ -0.53
CAPN1-210ENST00000527699 FAM160B2Q86V87 743 aa11.72□□□□□ -0.53
CAPN1-210ENST00000527699 FAM133AQ8N9E0 248 aa11.72□□□□□ -0.53
CAPN1-210ENST00000527699 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-210ENST00000527699 HIPK3Q9H422 1215 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms