RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 OPLAHO14841 1288 aa21.41■■□□□ 1.02
SMPD1-203ENST00000527275 SLC10A3P09131 477 aa21.41■■□□□ 1.02
SMPD1-203ENST00000527275 CCDC192P0DO97 292 aa21.41■■□□□ 1.02
SMPD1-203ENST00000527275 HERVK_113P62684 666 aa21.41■■□□□ 1.02
SMPD1-203ENST00000527275 SNW1Q13573 536 aaKnown RBP21.41■■□□□ 1.02
SMPD1-203ENST00000527275 ENGASEQ8NFI3 743 aa21.41■■□□□ 1.02
SMPD1-203ENST00000527275 MRPS27Q92552 414 aaKnown RBP21.41■■□□□ 1.02
SMPD1-203ENST00000527275 CUL5Q93034 780 aa21.41■■□□□ 1.02
SMPD1-203ENST00000527275 PTPN18Q99952 460 aa21.41■■□□□ 1.02
SMPD1-203ENST00000527275 PCDHA6Q9UN73 950 aa21.41■■□□□ 1.02
SMPD1-203ENST00000527275 PCDHA8Q9Y5H6 950 aa21.41■■□□□ 1.02
SMPD1-203ENST00000527275 FAM205CA6NFA0 338 aa21.41■■□□□ 1.02
SMPD1-203ENST00000527275 PEX10O60683 326 aa21.41■■□□□ 1.02
SMPD1-203ENST00000527275 FAM160A1Q05DH4 1040 aa21.41■■□□□ 1.02
SMPD1-203ENST00000527275 CCDC173Q0VFZ6 552 aa21.41■■□□□ 1.02
SMPD1-203ENST00000527275 RBM43Q6ZSC3 357 aaKnown RBP21.41■■□□□ 1.02
SMPD1-203ENST00000527275 CKAP2LQ8IYA6 745 aa21.41■■□□□ 1.02
SMPD1-203ENST00000527275 BIN2Q9UBW5 565 aaPredicted RBP21.41■■□□□ 1.02
SMPD1-203ENST00000527275 FAM155AB1AL88 458 aaPredicted RBP21.4■■□□□ 1.02
SMPD1-203ENST00000527275 PDHXO00330 501 aa21.4■■□□□ 1.02
SMPD1-203ENST00000527275 MRPL12P52815 198 aaKnown RBP21.4■■□□□ 1.02
SMPD1-203ENST00000527275 PTPAQ15257 358 aa21.4■■□□□ 1.02
SMPD1-203ENST00000527275 LBX2Q6XYB7 198 aa21.4■■□□□ 1.02
SMPD1-203ENST00000527275 REXO1Q8N1G1 1221 aaKnown RBP21.4■■□□□ 1.02
SMPD1-203ENST00000527275 FAM43AQ8N2R8 423 aa21.4■■□□□ 1.02
SMPD1-203ENST00000527275 HHIPL1Q96JK4 782 aa21.4■■□□□ 1.02
SMPD1-203ENST00000527275 HOMER2Q9NSB8 354 aa21.4■■□□□ 1.02
SMPD1-203ENST00000527275 RIPK3Q9Y572 518 aa21.4■■□□□ 1.02
SMPD1-203ENST00000527275 CYP2C8P10632 490 aa21.4■■□□□ 1.02
SMPD1-203ENST00000527275 ALAS1P13196 640 aa21.4■■□□□ 1.02
SMPD1-203ENST00000527275 OSBPP22059 807 aa21.4■■□□□ 1.02
SMPD1-203ENST00000527275 USP17L6PQ6QN14 398 aa21.4■■□□□ 1.02
SMPD1-203ENST00000527275 PIK3AP1Q6ZUJ8 805 aa21.4■■□□□ 1.02
SMPD1-203ENST00000527275 CCDC102AQ96A19 550 aa21.4■■□□□ 1.02
SMPD1-203ENST00000527275 PPP6R2O75170 966 aa21.39■■□□□ 1.01
SMPD1-203ENST00000527275 MARCKSP29966 332 aaPredicted RBP21.39■■□□□ 1.01
SMPD1-203ENST00000527275 OAZ1P54368 228 aa21.39■■□□□ 1.01
SMPD1-203ENST00000527275 UBE2SQ16763 222 aa21.39■■□□□ 1.01
SMPD1-203ENST00000527275 AXDND1Q5T1B0 1012 aaPredicted RBP21.39■■□□□ 1.01
SMPD1-203ENST00000527275 SNRNP48Q6IEG0 339 aaKnown RBP21.39■■□□□ 1.01
SMPD1-203ENST00000527275 JMYQ8N9B5 988 aa21.39■■□□□ 1.01
SMPD1-203ENST00000527275 PPP1R9BQ96SB3 815 aa21.39■■□□□ 1.01
SMPD1-203ENST00000527275 MRPL11Q9Y3B7 192 aaKnown RBP21.39■■□□□ 1.01
SMPD1-203ENST00000527275 ABCB11O95342 1321 aa21.39■■□□□ 1.01
SMPD1-203ENST00000527275 A0A1B0GVL5 298 aa21.38■■□□□ 1.01
SMPD1-203ENST00000527275 MEIS2O14770 477 aa21.38■■□□□ 1.01
SMPD1-203ENST00000527275 ATP2A1O14983 1001 aa21.38■■□□□ 1.01
SMPD1-203ENST00000527275 KINO60870 393 aaKnown RBP21.38■■□□□ 1.01
SMPD1-203ENST00000527275 TOB1P50616 345 aaPredicted RBP21.38■■□□□ 1.01
SMPD1-203ENST00000527275 GRM1Q13255 1194 aa21.38■■□□□ 1.01
SMPD1-203ENST00000527275 PLS1Q14651 629 aa21.38■■□□□ 1.01
SMPD1-203ENST00000527275 RILPL1Q5EBL4 403 aa21.38■■□□□ 1.01
SMPD1-203ENST00000527275 JAKMIP3Q5VZ66 844 aa21.38■■□□□ 1.01
SMPD1-203ENST00000527275 PAXIP1Q6ZW49 1069 aaPredicted RBP21.38■■□□□ 1.01
SMPD1-203ENST00000527275 ANKRD23Q86SG2 305 aa21.38■■□□□ 1.01
SMPD1-203ENST00000527275 MB21D1Q8N884 522 aa21.38■■□□□ 1.01
SMPD1-203ENST00000527275 TEX13BQ9BXU2 312 aa21.38■■□□□ 1.01
SMPD1-203ENST00000527275 TMEM260Q9NX78 707 aa21.38■■□□□ 1.01
SMPD1-203ENST00000527275 BTBD7Q9P203 1132 aa21.38■■□□□ 1.01
SMPD1-203ENST00000527275 SLC45A1Q9Y2W3 748 aa21.38■■□□□ 1.01
SMPD1-203ENST00000527275 TESPA1A2RU30 521 aaPredicted RBP21.38■■□□□ 1.01
SMPD1-203ENST00000527275 UVSSAQ2YD98 709 aa21.38■■□□□ 1.01
SMPD1-203ENST00000527275 TBC1D5Q92609 795 aa21.38■■□□□ 1.01
SMPD1-203ENST00000527275 PNMA3Q9UL41 463 aa21.38■■□□□ 1.01
SMPD1-203ENST00000527275 MANSC4A6NHS7 340 aaPredicted RBP21.37■■□□□ 1.01
SMPD1-203ENST00000527275 CTAGE5O15320 804 aa21.37■■□□□ 1.01
SMPD1-203ENST00000527275 STAT3P40763 770 aa21.37■■□□□ 1.01
SMPD1-203ENST00000527275 APLP1P51693 650 aa21.37■■□□□ 1.01
SMPD1-203ENST00000527275 FMR1NBQ8N0W7 255 aaPredicted RBP21.37■■□□□ 1.01
SMPD1-203ENST00000527275 PAGR1Q9BTK6 254 aa21.37■■□□□ 1.01
SMPD1-203ENST00000527275 GLT8D2Q9H1C3 349 aa21.37■■□□□ 1.01
SMPD1-203ENST00000527275 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.37■■□□□ 1.01
SMPD1-203ENST00000527275 PNMA2Q9UL42 364 aa21.37■■□□□ 1.01
SMPD1-203ENST00000527275 CCDC194A0A1B0GVG4 234 aa21.37■■□□□ 1.01
SMPD1-203ENST00000527275 NFIBO00712 420 aa21.37■■□□□ 1.01
SMPD1-203ENST00000527275 CFBP00751 764 aa21.37■■□□□ 1.01
SMPD1-203ENST00000527275 CMA1P23946 247 aa21.37■■□□□ 1.01
SMPD1-203ENST00000527275 HOXA13P31271 388 aaPredicted RBP21.37■■□□□ 1.01
SMPD1-203ENST00000527275 CLK2P49760 499 aaKnown RBP21.37■■□□□ 1.01
SMPD1-203ENST00000527275 NDUFA8P51970 172 aa21.37■■□□□ 1.01
SMPD1-203ENST00000527275 TYRO3Q06418 890 aa21.37■■□□□ 1.01
SMPD1-203ENST00000527275 MUM1L1Q5H9M0 696 aa21.37■■□□□ 1.01
SMPD1-203ENST00000527275 CYP4F22Q6NT55 531 aa21.37■■□□□ 1.01
SMPD1-203ENST00000527275 SMCR8Q8TEV9 937 aaPredicted RBP21.37■■□□□ 1.01
SMPD1-203ENST00000527275 CLEC4DQ8WXI8 215 aa21.37■■□□□ 1.01
SMPD1-203ENST00000527275 TRERF1Q96PN7 1200 aa21.37■■□□□ 1.01
SMPD1-203ENST00000527275 TXNRD2Q9NNW7 524 aa21.37■■□□□ 1.01
SMPD1-203ENST00000527275 CREBZFQ9NS37 354 aa21.37■■□□□ 1.01
SMPD1-203ENST00000527275 RBPJLQ9UBG7 517 aa21.37■■□□□ 1.01
SMPD1-203ENST00000527275 IGF2BP3O00425 579 aaKnown RBP eCLIP21.36■■□□□ 1.01
SMPD1-203ENST00000527275 ATP2B1P20020 1258 aa21.36■■□□□ 1.01
SMPD1-203ENST00000527275 ZIC5Q96T25 663 aa21.36■■□□□ 1.01
SMPD1-203ENST00000527275 A0A0G2JMZ2 1700 aa21.35■■□□□ 1.01
SMPD1-203ENST00000527275 SASS6Q6UVJ0 657 aa21.35■■□□□ 1.01
SMPD1-203ENST00000527275 RNF146Q9NTX7 359 aa21.35■■□□□ 1.01
SMPD1-203ENST00000527275 PIK3CDO00329 1044 aa21.34■■□□□ 1.01
SMPD1-203ENST00000527275 CNMDO75829 334 aa21.34■■□□□ 1.01
SMPD1-203ENST00000527275 INF2Q27J81 1249 aa21.34■■□□□ 1.01
SMPD1-203ENST00000527275 KRT25Q7Z3Z0 450 aa21.34■■□□□ 1.01
SMPD1-203ENST00000527275 SPATC1LQ9H0A9 340 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms