RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 GCFC2P16383 781 aaKnown RBP18.3■□□□□ 0.52
SNRNP35-204ENST00000527158 AP3B2Q13367 1082 aa18.3■□□□□ 0.52
SNRNP35-204ENST00000527158 KARSQ15046 597 aaKnown RBP18.3■□□□□ 0.52
SNRNP35-204ENST00000527158 PDXDC2PQ6P474 469 aa18.3■□□□□ 0.52
SNRNP35-204ENST00000527158 FAM160B2Q86V87 743 aa18.3■□□□□ 0.52
SNRNP35-204ENST00000527158 DRC7Q8IY82 874 aa18.3■□□□□ 0.52
SNRNP35-204ENST00000527158 HOOK2Q96ED9 719 aa18.3■□□□□ 0.52
SNRNP35-204ENST00000527158 FEZ1Q99689 392 aa18.3■□□□□ 0.52
SNRNP35-204ENST00000527158 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.3■□□□□ 0.52
SNRNP35-204ENST00000527158 ASTN2O75129 1339 aaPredicted RBP18.3■□□□□ 0.52
SNRNP35-204ENST00000527158 CTNND1O60716 968 aaKnown RBP18.3■□□□□ 0.52
SNRNP35-204ENST00000527158 PLA2G6O60733 806 aa18.3■□□□□ 0.52
SNRNP35-204ENST00000527158 TDP2O95551 362 aa18.3■□□□□ 0.52
SNRNP35-204ENST00000527158 TECP42680 631 aa18.3■□□□□ 0.52
SNRNP35-204ENST00000527158 DPYDQ12882 1025 aa18.3■□□□□ 0.52
SNRNP35-204ENST00000527158 TMEM266Q2M3C6 531 aa18.3■□□□□ 0.52
SNRNP35-204ENST00000527158 GPC2Q8N158 579 aa18.3■□□□□ 0.52
SNRNP35-204ENST00000527158 ZNF830Q96NB3 372 aaPredicted RBP18.3■□□□□ 0.52
SNRNP35-204ENST00000527158 MTMR9Q96QG7 549 aa18.3■□□□□ 0.52
SNRNP35-204ENST00000527158 RAB34Q9BZG1 259 aa18.3■□□□□ 0.52
SNRNP35-204ENST00000527158 PP2D1A8MPX8 630 aa18.29■□□□□ 0.52
SNRNP35-204ENST00000527158 BMP6P22004 513 aa18.29■□□□□ 0.52
SNRNP35-204ENST00000527158 TXKP42681 527 aa18.29■□□□□ 0.52
SNRNP35-204ENST00000527158 MYL5Q02045 173 aa18.29■□□□□ 0.52
SNRNP35-204ENST00000527158 DCAF15Q66K64 600 aa18.29■□□□□ 0.52
SNRNP35-204ENST00000527158 APOBEC3FQ8IUX4 373 aaKnown RBP18.29■□□□□ 0.52
SNRNP35-204ENST00000527158 ZNF341Q9BYN7 854 aa18.29■□□□□ 0.52
SNRNP35-204ENST00000527158 GPRC5DQ9NZD1 345 aa18.29■□□□□ 0.52
SNRNP35-204ENST00000527158 DDX25Q9UHL0 483 aaKnown RBP18.29■□□□□ 0.52
SNRNP35-204ENST00000527158 FEM1BQ9UK73 627 aa18.29■□□□□ 0.52
SNRNP35-204ENST00000527158 CDC25BP30305 580 aa18.28■□□□□ 0.52
SNRNP35-204ENST00000527158 USP11P51784 963 aa18.28■□□□□ 0.52
SNRNP35-204ENST00000527158 CABP7Q86V35 215 aa18.28■□□□□ 0.52
SNRNP35-204ENST00000527158 SPC24Q8NBT2 197 aa18.28■□□□□ 0.52
SNRNP35-204ENST00000527158 KIFC2Q96AC6 838 aa18.28■□□□□ 0.52
SNRNP35-204ENST00000527158 FHDC1Q9C0D6 1143 aaPredicted RBP18.28■□□□□ 0.52
SNRNP35-204ENST00000527158 MEIS2O14770 477 aa18.28■□□□□ 0.52
SNRNP35-204ENST00000527158 GTPBP6O43824 516 aaPredicted RBP18.28■□□□□ 0.52
SNRNP35-204ENST00000527158 SLC37A4O43826 429 aa18.28■□□□□ 0.52
SNRNP35-204ENST00000527158 EDIL3O43854 480 aa18.28■□□□□ 0.52
SNRNP35-204ENST00000527158 FOSP01100 380 aaPredicted RBP18.28■□□□□ 0.52
SNRNP35-204ENST00000527158 RBM10P98175 930 aaKnown RBP18.28■□□□□ 0.52
SNRNP35-204ENST00000527158 NCAPHQ15003 741 aa18.28■□□□□ 0.52
SNRNP35-204ENST00000527158 IGSF22Q8N9C0 903 aa18.28■□□□□ 0.52
SNRNP35-204ENST00000527158 MRFAP1L1Q96HT8 127 aa18.28■□□□□ 0.52
SNRNP35-204ENST00000527158 ANO3Q9BYT9 981 aa18.28■□□□□ 0.52
SNRNP35-204ENST00000527158 GLIS2Q9BZE0 524 aaPredicted RBP18.28■□□□□ 0.52
SNRNP35-204ENST00000527158 MARCH6O60337 910 aa18.27■□□□□ 0.52
SNRNP35-204ENST00000527158 FXR2P51116 673 aaKnown RBP eCLIP18.27■□□□□ 0.52
SNRNP35-204ENST00000527158 CT47A1Q5JQC4 288 aaPredicted RBP18.27■□□□□ 0.52
SNRNP35-204ENST00000527158 NBPF12Q5TAG4 269 aaPredicted RBP18.27■□□□□ 0.52
SNRNP35-204ENST00000527158 ANGEL2Q5VTE6 544 aaKnown RBP18.27■□□□□ 0.52
SNRNP35-204ENST00000527158 TEX2Q8IWB9 1127 aa18.27■□□□□ 0.52
SNRNP35-204ENST00000527158 STAMQ92783 540 aa18.27■□□□□ 0.52
SNRNP35-204ENST00000527158 CUEDC2Q9H467 287 aa18.27■□□□□ 0.52
SNRNP35-204ENST00000527158 SPDYE3A6NKU9 549 aa18.27■□□□□ 0.51
SNRNP35-204ENST00000527158 PDIA5Q14554 519 aa18.27■□□□□ 0.51
SNRNP35-204ENST00000527158 CCDC84Q86UT8 332 aaPredicted RBP18.27■□□□□ 0.51
SNRNP35-204ENST00000527158 RANBP17Q9H2T7 1088 aaKnown RBP18.27■□□□□ 0.51
SNRNP35-204ENST00000527158 LRWD1Q9UFC0 647 aa18.27■□□□□ 0.51
SNRNP35-204ENST00000527158 CASP1P29466 404 aa18.26■□□□□ 0.51
SNRNP35-204ENST00000527158 LPAR1Q92633 364 aa18.26■□□□□ 0.51
SNRNP35-204ENST00000527158 CALML4Q96GE6 196 aa18.26■□□□□ 0.51
SNRNP35-204ENST00000527158 MAGEF1Q9HAY2 307 aa18.26■□□□□ 0.51
SNRNP35-204ENST00000527158 RMND1Q9NWS8 449 aa18.26■□□□□ 0.51
SNRNP35-204ENST00000527158 MYL1P05976 194 aa18.25■□□□□ 0.51
SNRNP35-204ENST00000527158 CCDC174Q6PII3 467 aa18.25■□□□□ 0.51
SNRNP35-204ENST00000527158 BLZF1Q9H2G9 400 aa18.25■□□□□ 0.51
SNRNP35-204ENST00000527158 KCNF1Q9H3M0 494 aa18.25■□□□□ 0.51
SNRNP35-204ENST00000527158 ERCC5P28715 1186 aaPredicted RBP18.25■□□□□ 0.51
SNRNP35-204ENST00000527158 NAALADL2Q58DX5 795 aa18.25■□□□□ 0.51
SNRNP35-204ENST00000527158 PLIN2Q99541 437 aa18.25■□□□□ 0.51
SNRNP35-204ENST00000527158 MTRQ99707 1265 aa18.25■□□□□ 0.51
SNRNP35-204ENST00000527158 KIAA1683Q9H0B3 1180 aa18.25■□□□□ 0.51
SNRNP35-204ENST00000527158 PIK3CDO00329 1044 aa18.24■□□□□ 0.51
SNRNP35-204ENST00000527158 LMOD1P29536 600 aaPredicted RBP18.24■□□□□ 0.51
SNRNP35-204ENST00000527158 CUL4BQ13620 913 aa18.24■□□□□ 0.51
SNRNP35-204ENST00000527158 MOXD1Q6UVY6 613 aa18.24■□□□□ 0.51
SNRNP35-204ENST00000527158 TRPM4Q8TD43 1214 aa18.24■□□□□ 0.51
SNRNP35-204ENST00000527158 CYP3A7-CYP3A51PA0A087WV96 503 aa18.24■□□□□ 0.51
SNRNP35-204ENST00000527158 WDR46O15213 610 aaKnown RBP18.24■□□□□ 0.51
SNRNP35-204ENST00000527158 PLCG1P19174 1290 aa18.24■□□□□ 0.51
SNRNP35-204ENST00000527158 CYP3A7P24462 503 aa18.24■□□□□ 0.51
SNRNP35-204ENST00000527158 ARHGAP4P98171 946 aa18.24■□□□□ 0.51
SNRNP35-204ENST00000527158 SAMD1Q6SPF0 538 aaPredicted RBP18.24■□□□□ 0.51
SNRNP35-204ENST00000527158 ENOX1Q8TC92 643 aaKnown RBP18.24■□□□□ 0.51
SNRNP35-204ENST00000527158 KBTBD4Q9NVX7 518 aa18.24■□□□□ 0.51
SNRNP35-204ENST00000527158 MRPL11Q9Y3B7 192 aaKnown RBP18.24■□□□□ 0.51
SNRNP35-204ENST00000527158 PPP2R3BQ9Y5P8 575 aa18.24■□□□□ 0.51
SNRNP35-204ENST00000527158 RPN1P04843 607 aaKnown RBP18.23■□□□□ 0.51
SNRNP35-204ENST00000527158 INPP5BP32019 993 aa18.23■□□□□ 0.51
SNRNP35-204ENST00000527158 EPS15P42566 896 aa18.23■□□□□ 0.51
SNRNP35-204ENST00000527158 GGA3Q9NZ52 723 aa18.23■□□□□ 0.51
SNRNP35-204ENST00000527158 PCDHA12Q9UN75 941 aa18.23■□□□□ 0.51
SNRNP35-204ENST00000527158 OPLAHO14841 1288 aa18.23■□□□□ 0.51
SNRNP35-204ENST00000527158 KRT79Q5XKE5 535 aa18.23■□□□□ 0.51
SNRNP35-204ENST00000527158 PRPF38AQ8NAV1 312 aaKnown RBP18.23■□□□□ 0.51
SNRNP35-204ENST00000527158 HAS1Q92839 578 aa18.23■□□□□ 0.51
SNRNP35-204ENST00000527158 CDK5RAP3Q96JB5 506 aa18.23■□□□□ 0.51
SNRNP35-204ENST00000527158 MMTAG2Q9BU76 263 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms