RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 SLFN13Q68D06 897 aa20.04■□□□□ 0.8
CCS-204ENST00000526066 MSL3Q8N5Y2 521 aaKnown RBP20.04■□□□□ 0.8
CCS-204ENST00000526066 DCAF4Q8WV16 495 aa20.04■□□□□ 0.8
CCS-204ENST00000526066 ZSCAN31Q96LW9 406 aaPredicted RBP20.04■□□□□ 0.8
CCS-204ENST00000526066 TSEN34Q9BSV6 310 aaKnown RBP20.04■□□□□ 0.8
CCS-204ENST00000526066 TEX13BQ9BXU2 312 aa20.04■□□□□ 0.8
CCS-204ENST00000526066 TTYH1Q9H313 450 aaPredicted RBP20.04■□□□□ 0.8
CCS-204ENST00000526066 FAM184BQ9ULE4 1060 aa20.04■□□□□ 0.8
CCS-204ENST00000526066 ADAMTS5Q9UNA0 930 aa20.04■□□□□ 0.8
CCS-204ENST00000526066 NID2Q14112 1375 aa20.04■□□□□ 0.8
CCS-204ENST00000526066 MYH4Q9Y623 1939 aa20.04■□□□□ 0.8
CCS-204ENST00000526066 GOLGA8BA8MQT2 603 aa20.03■□□□□ 0.8
CCS-204ENST00000526066 CD2BP2O95400 341 aaKnown RBP20.03■□□□□ 0.8
CCS-204ENST00000526066 SPC25Q9HBM1 224 aa20.03■□□□□ 0.8
CCS-204ENST00000526066 MROH7Q68CQ1 1323 aa20.02■□□□□ 0.8
CCS-204ENST00000526066 MOXD2PA6NHM9 499 aa20.02■□□□□ 0.8
CCS-204ENST00000526066 ACLYP53396 1101 aa20.02■□□□□ 0.8
CCS-204ENST00000526066 GRM4Q14833 912 aa20.02■□□□□ 0.8
CCS-204ENST00000526066 MICU3Q86XE3 530 aa20.02■□□□□ 0.8
CCS-204ENST00000526066 TOX2Q96NM4 488 aa20.02■□□□□ 0.8
CCS-204ENST00000526066 SLF1Q9BQI6 1058 aa20.02■□□□□ 0.8
CCS-204ENST00000526066 LARP6Q9BRS8 491 aaKnown RBP20.02■□□□□ 0.8
CCS-204ENST00000526066 SH2B1Q9NRF2 756 aaPredicted RBP20.02■□□□□ 0.8
CCS-204ENST00000526066 ZHX1Q9UKY1 873 aaPredicted RBP20.02■□□□□ 0.8
CCS-204ENST00000526066 ZNF214Q9UL59 606 aaPredicted RBP20.02■□□□□ 0.8
CCS-204ENST00000526066 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.01■□□□□ 0.79
CCS-204ENST00000526066 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.01■□□□□ 0.79
CCS-204ENST00000526066 PFKFB2O60825 505 aa20.01■□□□□ 0.79
CCS-204ENST00000526066 TAL1P17542 331 aaPredicted RBP20.01■□□□□ 0.79
CCS-204ENST00000526066 KIF5BP33176 963 aa20.01■□□□□ 0.79
CCS-204ENST00000526066 SLC4A3P48751 1232 aa20.01■□□□□ 0.79
CCS-204ENST00000526066 ME3Q16798 604 aa20.01■□□□□ 0.79
CCS-204ENST00000526066 ASPRV1Q53RT3 343 aa20.01■□□□□ 0.79
CCS-204ENST00000526066 GPATCH4Q5T3I0 446 aaKnown RBP20.01■□□□□ 0.79
CCS-204ENST00000526066 SNRNP48Q6IEG0 339 aaKnown RBP20.01■□□□□ 0.79
CCS-204ENST00000526066 NOL8Q76FK4 1167 aaKnown RBP20.01■□□□□ 0.79
CCS-204ENST00000526066 FANCBQ8NB91 859 aa20.01■□□□□ 0.79
CCS-204ENST00000526066 CTCFLQ8NI51 663 aaPredicted RBP20.01■□□□□ 0.79
CCS-204ENST00000526066 GLT1D1Q96MS3 346 aa20.01■□□□□ 0.79
CCS-204ENST00000526066 MYL10Q9BUA6 226 aa20.01■□□□□ 0.79
CCS-204ENST00000526066 PRDM6Q9NQX0 595 aa20.01■□□□□ 0.79
CCS-204ENST00000526066 NAP1L2Q9ULW6 460 aaPredicted RBP20.01■□□□□ 0.79
CCS-204ENST00000526066 LAMA2P24043 3122 aaKnown RBP20.01■□□□□ 0.79
CCS-204ENST00000526066 SYNGAP1Q96PV0 1343 aa20.01■□□□□ 0.79
CCS-204ENST00000526066 SYNRGQ9UMZ2 1314 aa20.01■□□□□ 0.79
CCS-204ENST00000526066 CCDC196A0A1B0GTZ2 297 aa20■□□□□ 0.79
CCS-204ENST00000526066 PALM3A6NDB9 673 aaPredicted RBP20■□□□□ 0.79
CCS-204ENST00000526066 GOLGA8AA7E2F4 631 aa20■□□□□ 0.79
CCS-204ENST00000526066 PARP1P09874 1014 aaKnown RBP20■□□□□ 0.79
CCS-204ENST00000526066 ZNF865P0CJ78 1059 aaPredicted RBP20■□□□□ 0.79
CCS-204ENST00000526066 BMP3P12645 472 aa20■□□□□ 0.79
CCS-204ENST00000526066 DNAJB2P25686 324 aa20■□□□□ 0.79
CCS-204ENST00000526066 SLC1A4P43007 532 aa20■□□□□ 0.79
CCS-204ENST00000526066 METAP2P50579 478 aaKnown RBP eCLIP20■□□□□ 0.79
CCS-204ENST00000526066 ZNF543Q08ER8 600 aa20■□□□□ 0.79
CCS-204ENST00000526066 ANKRD33Q7Z3H0 272 aa20■□□□□ 0.79
CCS-204ENST00000526066 VTI1AQ96AJ9 217 aa20■□□□□ 0.79
CCS-204ENST00000526066 LENG1Q96BZ8 264 aaPredicted RBP20■□□□□ 0.79
CCS-204ENST00000526066 CHMP4CQ96CF2 233 aa20■□□□□ 0.79
CCS-204ENST00000526066 SLKQ9H2G2 1235 aaPredicted RBP20■□□□□ 0.79
CCS-204ENST00000526066 RBM28Q9NW13 759 aaKnown RBP20■□□□□ 0.79
CCS-204ENST00000526066 ZBED4O75132 1171 aa19.99■□□□□ 0.79
CCS-204ENST00000526066 ADAMTS4O75173 837 aa19.99■□□□□ 0.79
CCS-204ENST00000526066 ITGB8P26012 769 aa19.99■□□□□ 0.79
CCS-204ENST00000526066 GNAQP50148 359 aa19.99■□□□□ 0.79
CCS-204ENST00000526066 EPHB4P54760 987 aa19.99■□□□□ 0.79
CCS-204ENST00000526066 RTN1Q16799 776 aa19.99■□□□□ 0.79
CCS-204ENST00000526066 HSCBQ8IWL3 235 aa19.99■□□□□ 0.79
CCS-204ENST00000526066 PCSK9Q8NBP7 692 aaKnown RBP19.99■□□□□ 0.79
CCS-204ENST00000526066 TMX3Q96JJ7 454 aa19.99■□□□□ 0.79
CCS-204ENST00000526066 LZTS2Q9BRK4 669 aa19.99■□□□□ 0.79
CCS-204ENST00000526066 MAD2L2Q9UI95 211 aa19.99■□□□□ 0.79
CCS-204ENST00000526066 K7ELQ4 463 aaPredicted RBP19.98■□□□□ 0.79
CCS-204ENST00000526066 PLA2G6O60733 806 aa19.98■□□□□ 0.79
CCS-204ENST00000526066 LARGE1O95461 756 aa19.98■□□□□ 0.79
CCS-204ENST00000526066 C6orf222P0C671 652 aaPredicted RBP19.98■□□□□ 0.79
CCS-204ENST00000526066 RXRAP19793 462 aa19.98■□□□□ 0.79
CCS-204ENST00000526066 FAAP100Q0VG06 881 aa19.98■□□□□ 0.79
CCS-204ENST00000526066 PPIGQ13427 754 aaKnown RBP eCLIP19.98■□□□□ 0.792e-6■■□□□ 12.1
CCS-204ENST00000526066 KCNA10Q16322 511 aa19.98■□□□□ 0.79
CCS-204ENST00000526066 CCDC96Q2M329 555 aa19.98■□□□□ 0.79
CCS-204ENST00000526066 RAB11FIP4Q86YS3 637 aa19.98■□□□□ 0.79
CCS-204ENST00000526066 PRPF38AQ8NAV1 312 aaKnown RBP19.98■□□□□ 0.79
CCS-204ENST00000526066 GTF3C6Q969F1 213 aa19.98■□□□□ 0.79
CCS-204ENST00000526066 FAM217BQ9NTX9 383 aaPredicted RBP19.98■□□□□ 0.79
CCS-204ENST00000526066 MTMR7Q9Y216 660 aa19.98■□□□□ 0.79
CCS-204ENST00000526066 TLR3O15455 904 aaKnown RBP19.97■□□□□ 0.79
CCS-204ENST00000526066 DHX16O60231 1041 aaKnown RBP19.97■□□□□ 0.79
CCS-204ENST00000526066 DUSP11O75319 330 aaKnown RBP19.97■□□□□ 0.79
CCS-204ENST00000526066 TIMP1P01033 207 aa19.97■□□□□ 0.79
CCS-204ENST00000526066 SMARCA1P28370 1054 aa19.97■□□□□ 0.79
CCS-204ENST00000526066 BTNL9Q6UXG8 535 aa19.97■□□□□ 0.79
CCS-204ENST00000526066 RASGRP2Q7LDG7 609 aa19.97■□□□□ 0.79
CCS-204ENST00000526066 CPXCR1Q8N123 301 aa19.97■□□□□ 0.79
CCS-204ENST00000526066 ANKRD35Q8N283 1001 aa19.97■□□□□ 0.79
CCS-204ENST00000526066 REPS2Q8NFH8 660 aa19.97■□□□□ 0.79
CCS-204ENST00000526066 TIFAQ96CG3 184 aa19.97■□□□□ 0.79
CCS-204ENST00000526066 GAS2L1Q99501 681 aaPredicted RBP19.97■□□□□ 0.79
CCS-204ENST00000526066 NUP88Q99567 741 aaPredicted RBP19.97■□□□□ 0.79
CCS-204ENST00000526066 FBXO40Q9UH90 709 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms