RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 PRRT2Q7Z6L0 340 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-210ENST00000525878 METTL16Q86W50 562 aaKnown RBP7.23□□□□□ -1.25
CSDE1-210ENST00000525878 RASGRP4Q8TDF6 673 aa7.23□□□□□ -1.25
CSDE1-210ENST00000525878 SPATA32Q96LK8 384 aa7.23□□□□□ -1.25
CSDE1-210ENST00000525878 FBLN5Q9UBX5 448 aa7.23□□□□□ -1.25
CSDE1-210ENST00000525878 SUSD2Q9UGT4 822 aa7.23□□□□□ -1.25
CSDE1-210ENST00000525878 A0A1W2PQH9 124 aa7.22□□□□□ -1.25
CSDE1-210ENST00000525878 PPP1R11O60927 126 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-210ENST00000525878 MC3RP41968 323 aa7.22□□□□□ -1.25
CSDE1-210ENST00000525878 GNPTABQ3T906 1256 aa7.22□□□□□ -1.25
CSDE1-210ENST00000525878 ERICH6BQ5W0A0 696 aa7.22□□□□□ -1.25
CSDE1-210ENST00000525878 DBX2Q6ZNG2 339 aa7.22□□□□□ -1.25
CSDE1-210ENST00000525878 B3GNT8Q7Z7M8 397 aa7.22□□□□□ -1.25
CSDE1-210ENST00000525878 ZNF654Q8IZM8 581 aa7.22□□□□□ -1.25
CSDE1-210ENST00000525878 ARHGEF39Q8N4T4 335 aa7.22□□□□□ -1.25
CSDE1-210ENST00000525878 ADCY4Q8NFM4 1077 aa7.22□□□□□ -1.25
CSDE1-210ENST00000525878 KLHL6Q8WZ60 621 aa7.22□□□□□ -1.25
CSDE1-210ENST00000525878 MTA3Q9BTC8 594 aa7.22□□□□□ -1.25
CSDE1-210ENST00000525878 PMF1-BGLAPU3KQ54 211 aa7.22□□□□□ -1.25
CSDE1-210ENST00000525878 SCAMP3O14828 347 aaKnown RBP7.21□□□□□ -1.26
CSDE1-210ENST00000525878 PRICKLE3O43900 615 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-210ENST00000525878 VAMP4O75379 141 aa7.21□□□□□ -1.26
CSDE1-210ENST00000525878 EPHX1P07099 455 aa7.21□□□□□ -1.26
CSDE1-210ENST00000525878 EIF6P56537 245 aaKnown RBP7.21□□□□□ -1.26
CSDE1-210ENST00000525878 EFEMP1Q12805 493 aa7.21□□□□□ -1.26
CSDE1-210ENST00000525878 HEATR6Q6AI08 1181 aaKnown RBP7.21□□□□□ -1.26
CSDE1-210ENST00000525878 ADGRG2Q8IZP9 1017 aa7.21□□□□□ -1.26
CSDE1-210ENST00000525878 NETO2Q8NC67 525 aa7.21□□□□□ -1.26
CSDE1-210ENST00000525878 OR6P1Q8NGX9 317 aa7.21□□□□□ -1.26
CSDE1-210ENST00000525878 RCC1LQ96I51 464 aaKnown RBP7.21□□□□□ -1.26
CSDE1-210ENST00000525878 CRBNQ96SW2 442 aa7.21□□□□□ -1.26
CSDE1-210ENST00000525878 GBP3Q9H0R5 595 aa7.21□□□□□ -1.26
CSDE1-210ENST00000525878 CGGBP1Q9UFW8 167 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-210ENST00000525878 EFR3BQ9Y2G0 817 aa7.21□□□□□ -1.26
CSDE1-210ENST00000525878 A0A1B0GTL3 188 aa7.2□□□□□ -1.26
CSDE1-210ENST00000525878 SLC7A5Q01650 507 aa7.2□□□□□ -1.26
CSDE1-210ENST00000525878 TRIM26Q12899 539 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-210ENST00000525878 GRB10Q13322 594 aa7.2□□□□□ -1.26
CSDE1-210ENST00000525878 TMCO4Q5TGY1 634 aa7.2□□□□□ -1.26
CSDE1-210ENST00000525878 ZNF513Q8N8E2 541 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-210ENST00000525878 ZNF526Q8TF50 670 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-210ENST00000525878 CPA5Q8WXQ8 436 aa7.2□□□□□ -1.26
CSDE1-210ENST00000525878 ALG3Q92685 438 aa7.2□□□□□ -1.26
CSDE1-210ENST00000525878 DBR1Q9UK59 544 aaKnown RBP7.2□□□□□ -1.26
CSDE1-210ENST00000525878 PCDHB10Q9UN67 800 aa7.2□□□□□ -1.26
CSDE1-210ENST00000525878 BACE2Q9Y5Z0 518 aa7.2□□□□□ -1.26
CSDE1-210ENST00000525878 STXBP3O00186 592 aa7.19□□□□□ -1.26
CSDE1-210ENST00000525878 PPM1BO75688 479 aa7.19□□□□□ -1.26
CSDE1-210ENST00000525878 PMLP29590 882 aa7.19□□□□□ -1.26
CSDE1-210ENST00000525878 RTP5Q14D33 572 aa7.19□□□□□ -1.26
CSDE1-210ENST00000525878 LZTR1Q8N653 840 aa7.19□□□□□ -1.26
CSDE1-210ENST00000525878 FGD4Q96M96 766 aa7.19□□□□□ -1.26
CSDE1-210ENST00000525878 FAN1Q9Y2M0 1017 aa7.19□□□□□ -1.26
CSDE1-210ENST00000525878 RWDD3Q9Y3V2 267 aa7.19□□□□□ -1.26
CSDE1-210ENST00000525878 C2orf71A6NGG8 1288 aa7.18□□□□□ -1.26
CSDE1-210ENST00000525878 ADRB1P08588 477 aa7.18□□□□□ -1.26
CSDE1-210ENST00000525878 GJA8P48165 433 aa7.18□□□□□ -1.26
CSDE1-210ENST00000525878 SLC9A5Q14940 896 aa7.18□□□□□ -1.26
CSDE1-210ENST00000525878 CABP7Q86V35 215 aa7.18□□□□□ -1.26
CSDE1-210ENST00000525878 GPRASP2Q96D09 838 aa7.18□□□□□ -1.26
CSDE1-210ENST00000525878 SHDQ96IW2 340 aa7.18□□□□□ -1.26
CSDE1-210ENST00000525878 SPATA25Q9BR10 227 aa7.18□□□□□ -1.26
CSDE1-210ENST00000525878 BCAS3Q9H6U6 928 aa7.18□□□□□ -1.26
CSDE1-210ENST00000525878 RXFP1Q9HBX9 757 aa7.18□□□□□ -1.26
CSDE1-210ENST00000525878 CNOT11Q9UKZ1 510 aaKnown RBP7.18□□□□□ -1.26
CSDE1-210ENST00000525878 SEPHS1P49903 392 aa7.17□□□□□ -1.26
CSDE1-210ENST00000525878 CASP7P55210 303 aa7.17□□□□□ -1.26
CSDE1-210ENST00000525878 AMPD2Q01433 879 aa7.17□□□□□ -1.26
CSDE1-210ENST00000525878 DPY19L1Q2PZI1 675 aa7.17□□□□□ -1.26
CSDE1-210ENST00000525878 GGNQ86UU5 652 aa7.17□□□□□ -1.26
CSDE1-210ENST00000525878 PEX11GQ96HA9 241 aa7.17□□□□□ -1.26
CSDE1-210ENST00000525878 BDH2Q9BUT1 245 aa7.17□□□□□ -1.26
CSDE1-210ENST00000525878 TRBV23OR9-2A0A075B6M9 112 aa7.16□□□□□ -1.26
CSDE1-210ENST00000525878 ZBTB7AO95365 584 aa7.16□□□□□ -1.26
CSDE1-210ENST00000525878 PAMP19021 973 aa7.16□□□□□ -1.26
CSDE1-210ENST00000525878 PLP2Q04941 152 aa7.16□□□□□ -1.26
CSDE1-210ENST00000525878 CACNB2Q08289 660 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-210ENST00000525878 SPATS1Q496A3 300 aa7.16□□□□□ -1.26
CSDE1-210ENST00000525878 NT5DC1Q5TFE4 455 aa7.16□□□□□ -1.26
CSDE1-210ENST00000525878 ADAT2Q7Z6V5 191 aaKnown RBP7.16□□□□□ -1.26
CSDE1-210ENST00000525878 CPNE8Q86YQ8 564 aa7.16□□□□□ -1.26
CSDE1-210ENST00000525878 CARFQ8N187 725 aa7.16□□□□□ -1.26
CSDE1-210ENST00000525878 COPS5Q92905 334 aa7.16□□□□□ -1.26
CSDE1-210ENST00000525878 NOX5Q96PH1 765 aa7.16□□□□□ -1.26
CSDE1-210ENST00000525878 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.16□□□□□ -1.269e-7■■■□□ 17
CSDE1-210ENST00000525878 GULP1Q9UBP9 304 aa7.16□□□□□ -1.26
CSDE1-210ENST00000525878 NUDT5Q9UKK9 219 aa7.16□□□□□ -1.26
CSDE1-210ENST00000525878 C7orf72A4D263 438 aa7.15□□□□□ -1.26
CSDE1-210ENST00000525878 NOBOXO60393 691 aa7.15□□□□□ -1.26
CSDE1-210ENST00000525878 WWC2Q6AWC2 1192 aa7.15□□□□□ -1.26
CSDE1-210ENST00000525878 SMARCC2Q8TAQ2 1214 aa7.15□□□□□ -1.26
CSDE1-210ENST00000525878 SPATA6Q9NWH7 488 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-210ENST00000525878 NPHP3-ACAD11A0A0J9YXS1 232 aa7.14□□□□□ -1.27
CSDE1-210ENST00000525878 MFAP1P55081 439 aaKnown RBP7.14□□□□□ -1.27
CSDE1-210ENST00000525878 RBM10P98175 930 aaKnown RBP7.14□□□□□ -1.27
CSDE1-210ENST00000525878 LINC00482Q8N8I6 264 aa7.14□□□□□ -1.27
CSDE1-210ENST00000525878 PLEKHO2Q8TD55 490 aa7.14□□□□□ -1.27
CSDE1-210ENST00000525878 APEX2Q9UBZ4 518 aa7.14□□□□□ -1.27
CSDE1-210ENST00000525878 ANKRD34BA5PLL1 514 aa7.13□□□□□ -1.27
CSDE1-210ENST00000525878 KIAA1211LQ6NV74 962 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms