RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 KIAA0825Q8IV33 1275 aa5.98□□□□□ -1.45
CD44-218ENST00000525469 ETFBKMTQ8IXQ9 262 aa5.98□□□□□ -1.45
CD44-218ENST00000525469 NUDT8Q8WV74 236 aa5.98□□□□□ -1.45
CD44-218ENST00000525469 BRI3BPQ8WY22 251 aa5.98□□□□□ -1.45
CD44-218ENST00000525469 TIGD1Q96MW7 591 aa5.98□□□□□ -1.45
CD44-218ENST00000525469 DEFB118Q96PH6 123 aa5.98□□□□□ -1.45
CD44-218ENST00000525469 VEZTQ9HBM0 779 aa5.98□□□□□ -1.45
CD44-218ENST00000525469 ZCCHC17Q9NP64 241 aaKnown RBP5.98□□□□□ -1.45
CD44-218ENST00000525469 TLR7Q9NYK1 1049 aaKnown RBP5.98□□□□□ -1.45
CD44-218ENST00000525469 XDHP47989 1333 aa5.98□□□□□ -1.45
CD44-218ENST00000525469 C1QTNF9BB2RNN3 333 aa5.97□□□□□ -1.45
CD44-218ENST00000525469 CLSTN1O94985 981 aa5.97□□□□□ -1.45
CD44-218ENST00000525469 PROCP04070 461 aa5.97□□□□□ -1.45
CD44-218ENST00000525469 ELNP15502 786 aa5.97□□□□□ -1.45
CD44-218ENST00000525469 TARSP26639 723 aaKnown RBP5.97□□□□□ -1.45
CD44-218ENST00000525469 EIF4A1P60842 406 aaKnown RBP5.97□□□□□ -1.45
CD44-218ENST00000525469 SYCP1Q15431 976 aa5.97□□□□□ -1.45
CD44-218ENST00000525469 DACT2Q5SW24 774 aa5.97□□□□□ -1.45
CD44-218ENST00000525469 NBPF12Q5TAG4 269 aaPredicted RBP5.97□□□□□ -1.45
CD44-218ENST00000525469 DTWD1Q8N5C7 304 aa5.97□□□□□ -1.45
CD44-218ENST00000525469 HELQQ8TDG4 1101 aa5.97□□□□□ -1.45
CD44-218ENST00000525469 FAM89AQ96GI7 184 aa5.97□□□□□ -1.45
CD44-218ENST00000525469 CDX2Q99626 313 aaPredicted RBP5.97□□□□□ -1.45
CD44-218ENST00000525469 MXD3Q9BW11 206 aa5.97□□□□□ -1.45
CD44-218ENST00000525469 SAP130Q9H0E3 1048 aa5.97□□□□□ -1.45
CD44-218ENST00000525469 SLKQ9H2G2 1235 aaPredicted RBP5.97□□□□□ -1.45
CD44-218ENST00000525469 BRMS1Q9HCU9 246 aa5.97□□□□□ -1.45
CD44-218ENST00000525469 DIAPH3Q9NSV4 1193 aa5.97□□□□□ -1.45
CD44-218ENST00000525469 ZFATQ9P243 1243 aa5.97□□□□□ -1.45
CD44-218ENST00000525469 VCANP13611 3396 aa5.97□□□□□ -1.45
CD44-218ENST00000525469 SPEF2Q9C093 1822 aa5.97□□□□□ -1.45
CD44-218ENST00000525469 TTC28Q96AY4 2481 aa5.97□□□□□ -1.45
CD44-218ENST00000525469 NCOR1O75376 2440 aa5.96□□□□□ -1.45
CD44-218ENST00000525469 C9orf172C9J069 976 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 IRS4O14654 1257 aaPredicted RBP5.96□□□□□ -1.46
CD44-218ENST00000525469 TNFRSF10BO14763 440 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 ADCY3O60266 1144 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 TPM3P06753 285 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 FOSL2P15408 326 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 GRNP28799 593 aaKnown RBP5.96□□□□□ -1.46
CD44-218ENST00000525469 RBM5P52756 815 aaKnown RBP eCLIP5.96□□□□□ -1.46
CD44-218ENST00000525469 FCGRTP55899 365 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 RIPK4P57078 832 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 SETQ01105 290 aaPredicted RBP5.96□□□□□ -1.46
CD44-218ENST00000525469 NRG1Q02297 640 aaPredicted RBP5.96□□□□□ -1.46
CD44-218ENST00000525469 SNAPC2Q13487 334 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 TNFAIP1Q13829 316 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 CCDC152Q4G0S7 254 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 ALKBH2Q6NS38 261 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 COPS6Q7L5N1 327 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 CD163Q86VB7 1156 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 ANKRD18AQ8IVF6 992 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 CACTIN-AS1Q8N1I8 211 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 MNS1Q8NEH6 495 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 MYRIPQ8NFW9 859 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 TTC9Q92623 222 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 CFAP53Q96M91 514 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 LBHD1Q9BQE6 289 aaPredicted RBP5.96□□□□□ -1.46
CD44-218ENST00000525469 COA1Q9GZY4 146 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 RBM28Q9NW13 759 aaKnown RBP5.96□□□□□ -1.46
CD44-218ENST00000525469 CPA4Q9UI42 421 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 NAGPAQ9UK23 515 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 ZHX1Q9UKY1 873 aaPredicted RBP5.96□□□□□ -1.46
CD44-218ENST00000525469 USTQ9Y2C2 406 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 ZNF804BA4D1E1 1349 aa5.96□□□□□ -1.46
CD44-218ENST00000525469 TCF20Q9UGU0 1960 aaKnown RBP5.95□□□□□ -1.46
CD44-218ENST00000525469 CLRN2A0PK11 232 aa5.95□□□□□ -1.46
CD44-218ENST00000525469 GOLGA6L6A8MZA4 724 aa5.95□□□□□ -1.46
CD44-218ENST00000525469 BTBD19C9JJ37 291 aa5.95□□□□□ -1.46
CD44-218ENST00000525469 ANXA1P04083 346 aa5.95□□□□□ -1.46
CD44-218ENST00000525469 U2AF1L5P0DN76 240 aaPredicted RBP5.95□□□□□ -1.46
CD44-218ENST00000525469 HOXD8P13378 290 aaPredicted RBP5.95□□□□□ -1.46
CD44-218ENST00000525469 CHRNA4P43681 627 aa5.95□□□□□ -1.46
CD44-218ENST00000525469 GATA4P43694 442 aa5.95□□□□□ -1.46
CD44-218ENST00000525469 NASPP49321 788 aaPredicted RBP5.95□□□□□ -1.46
CD44-218ENST00000525469 AFF1P51825 1210 aaKnown RBP5.95□□□□□ -1.46
CD44-218ENST00000525469 U2AF1Q01081 240 aaKnown RBP eCLIP5.95□□□□□ -1.46
CD44-218ENST00000525469 PRKCZQ05513 592 aa5.95□□□□□ -1.46
CD44-218ENST00000525469 RASA3Q14644 834 aa5.95□□□□□ -1.46
CD44-218ENST00000525469 TTC39BQ5VTQ0 682 aaPredicted RBP5.95□□□□□ -1.46
CD44-218ENST00000525469 C17orf99Q6UX52 265 aa5.95□□□□□ -1.46
CD44-218ENST00000525469 C8orf86Q6ZUL3 223 aa5.95□□□□□ -1.46
CD44-218ENST00000525469 WFDC8Q8IUA0 241 aa5.95□□□□□ -1.46
CD44-218ENST00000525469 XAGE3Q8WTP9 111 aa5.95□□□□□ -1.46
CD44-218ENST00000525469 PRUNE2Q8WUY3 3088 aa5.95□□□□□ -1.46
CD44-218ENST00000525469 SPACA7Q96KW9 195 aa5.95□□□□□ -1.46
CD44-218ENST00000525469 C11orf49Q9H6J7 331 aa5.95□□□□□ -1.46
CD44-218ENST00000525469 SEC31BQ9NQW1 1179 aa5.95□□□□□ -1.46
CD44-218ENST00000525469 HDAC5Q9UQL6 1122 aa5.95□□□□□ -1.46
CD44-218ENST00000525469 USP20Q9Y2K6 914 aa5.95□□□□□ -1.46
CD44-218ENST00000525469 KCNMB2Q9Y691 235 aa5.95□□□□□ -1.46
CD44-218ENST00000525469 MED23Q9ULK4 1368 aa5.94□□□□□ -1.46
CD44-218ENST00000525469 DDX60LQ5H9U9 1706 aaKnown RBP5.94□□□□□ -1.46
CD44-218ENST00000525469 SSC5DA1L4H1 1573 aa5.94□□□□□ -1.46
CD44-218ENST00000525469 MYH3P11055 1940 aa5.94□□□□□ -1.46
CD44-218ENST00000525469 A0A0A0MRY4 1105 aa5.94□□□□□ -1.46
CD44-218ENST00000525469 MMP20O60882 483 aa5.94□□□□□ -1.46
CD44-218ENST00000525469 VGLL4Q14135 290 aa5.94□□□□□ -1.46
CD44-218ENST00000525469 C8orf34Q49A92 452 aa5.94□□□□□ -1.46
CD44-218ENST00000525469 PDE12Q6L8Q7 609 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms