RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 TINF2Q9BSI4 451 aa14.28□□□□□ -0.12
CCS-202ENST00000525435 NCOA5Q9HCD5 579 aaKnown RBP14.28□□□□□ -0.12
CCS-202ENST00000525435 BIN2Q9UBW5 565 aaPredicted RBP14.28□□□□□ -0.12
CCS-202ENST00000525435 SYNGAP1Q96PV0 1343 aa14.27□□□□□ -0.12
CCS-202ENST00000525435 PTPDC1A2A3K4 754 aa14.27□□□□□ -0.13
CCS-202ENST00000525435 GCOM1H8Y6P7 765 aaPredicted RBP14.27□□□□□ -0.13
CCS-202ENST00000525435 PIK3CDO00329 1044 aa14.27□□□□□ -0.13
CCS-202ENST00000525435 POLR2MP0CAP2 368 aa14.27□□□□□ -0.13
CCS-202ENST00000525435 ELNP15502 786 aa14.27□□□□□ -0.13
CCS-202ENST00000525435 PPP1R18Q6NYC8 613 aa14.27□□□□□ -0.13
CCS-202ENST00000525435 CCDC12Q8WUD4 166 aaPredicted RBP14.27□□□□□ -0.13
CCS-202ENST00000525435 PIBF1Q8WXW3 757 aa14.27□□□□□ -0.13
CCS-202ENST00000525435 GTF3C6Q969F1 213 aa14.27□□□□□ -0.13
CCS-202ENST00000525435 BARHL2Q9NY43 387 aa14.27□□□□□ -0.13
CCS-202ENST00000525435 BAZ2BQ9UIF8 2168 aaKnown RBP14.27□□□□□ -0.13
CCS-202ENST00000525435 MGAMO43451 1857 aa14.27□□□□□ -0.13
CCS-202ENST00000525435 COL11A1P12107 1806 aaPredicted RBP14.27□□□□□ -0.13
CCS-202ENST00000525435 RPTORQ8N122 1335 aa14.26□□□□□ -0.13
CCS-202ENST00000525435 SOWAHBA6NEL2 793 aa14.26□□□□□ -0.13
CCS-202ENST00000525435 OPLAHO14841 1288 aa14.26□□□□□ -0.13
CCS-202ENST00000525435 INHAP05111 366 aa14.26□□□□□ -0.13
CCS-202ENST00000525435 SCG2P13521 617 aa14.26□□□□□ -0.13
CCS-202ENST00000525435 CNTN2Q02246 1040 aa14.26□□□□□ -0.13
CCS-202ENST00000525435 STK3Q13188 491 aa14.26□□□□□ -0.13
CCS-202ENST00000525435 CCL14Q16627 93 aa14.26□□□□□ -0.13
CCS-202ENST00000525435 HEATR3Q7Z4Q2 680 aa14.26□□□□□ -0.13
CCS-202ENST00000525435 SYTL5Q8TDW5 730 aaPredicted RBP14.26□□□□□ -0.13
CCS-202ENST00000525435 MORC4Q8TE76 937 aa14.26□□□□□ -0.13
CCS-202ENST00000525435 NSUN6Q8TEA1 469 aaKnown RBP14.26□□□□□ -0.13
CCS-202ENST00000525435 SH3TC2Q8TF17 1288 aa14.26□□□□□ -0.13
CCS-202ENST00000525435 CUL5Q93034 780 aa14.26□□□□□ -0.13
CCS-202ENST00000525435 IWS1Q96ST2 819 aa14.26□□□□□ -0.13
CCS-202ENST00000525435 LLPHQ9BRT6 129 aaKnown RBP14.26□□□□□ -0.13
CCS-202ENST00000525435 PSTPIP2Q9H939 334 aa14.26□□□□□ -0.13
CCS-202ENST00000525435 HMX1Q9NP08 348 aaPredicted RBP14.26□□□□□ -0.13
CCS-202ENST00000525435 SH3GLB2Q9NR46 395 aa14.26□□□□□ -0.13
CCS-202ENST00000525435 FLRT1Q9NZU1 646 aa14.26□□□□□ -0.13
CCS-202ENST00000525435 ZNF236Q9UL36 1845 aa14.25□□□□□ -0.13
CCS-202ENST00000525435 ESYT2A0FGR8 921 aa14.25□□□□□ -0.13
CCS-202ENST00000525435 CAPN15O75808 1086 aa14.25□□□□□ -0.13
CCS-202ENST00000525435 DEXIO95424 95 aa14.25□□□□□ -0.13
CCS-202ENST00000525435 CFBP00751 764 aa14.25□□□□□ -0.13
CCS-202ENST00000525435 TAL1P17542 331 aaPredicted RBP14.25□□□□□ -0.13
CCS-202ENST00000525435 CALML3P27482 149 aa14.25□□□□□ -0.13
CCS-202ENST00000525435 CACNB2Q08289 660 aaPredicted RBP14.25□□□□□ -0.13
CCS-202ENST00000525435 PKN1Q16512 942 aa14.25□□□□□ -0.13
CCS-202ENST00000525435 MCTP2Q6DN12 878 aa14.25□□□□□ -0.13
CCS-202ENST00000525435 TBC1D5Q92609 795 aa14.25□□□□□ -0.13
CCS-202ENST00000525435 PHKBQ93100 1093 aa14.25□□□□□ -0.13
CCS-202ENST00000525435 FGD4Q96M96 766 aa14.25□□□□□ -0.13
CCS-202ENST00000525435 SLC26A6Q9BXS9 759 aa14.25□□□□□ -0.13
CCS-202ENST00000525435 ABHD16BQ9H3Z7 469 aa14.25□□□□□ -0.13
CCS-202ENST00000525435 CNPY2Q9Y2B0 182 aa14.25□□□□□ -0.13
CCS-202ENST00000525435 STK36Q9NRP7 1315 aa14.24□□□□□ -0.13
CCS-202ENST00000525435 hCG_1642624A0A1W2PR95 340 aa14.24□□□□□ -0.13
CCS-202ENST00000525435 STXBP3O00186 592 aa14.24□□□□□ -0.13
CCS-202ENST00000525435 MSCO60682 206 aa14.24□□□□□ -0.13
CCS-202ENST00000525435 SNAI1O95863 264 aaPredicted RBP14.24□□□□□ -0.13
CCS-202ENST00000525435 PRKAR2AP13861 404 aaKnown RBP14.24□□□□□ -0.13
CCS-202ENST00000525435 GNA11P29992 359 aa14.24□□□□□ -0.13
CCS-202ENST00000525435 CYP2C19P33261 490 aa14.24□□□□□ -0.13
CCS-202ENST00000525435 NAPAP54920 295 aa14.24□□□□□ -0.13
CCS-202ENST00000525435 WWC2Q6AWC2 1192 aa14.24□□□□□ -0.13
CCS-202ENST00000525435 WASF1Q92558 559 aa14.24□□□□□ -0.13
CCS-202ENST00000525435 TMEM106CQ9BVX2 250 aa14.24□□□□□ -0.13
CCS-202ENST00000525435 ZMYND12Q9H0C1 365 aa14.24□□□□□ -0.13
CCS-202ENST00000525435 RIC8AQ9NPQ8 531 aa14.24□□□□□ -0.13
CCS-202ENST00000525435 SMCO2A6NFE2 343 aa14.23□□□□□ -0.13
CCS-202ENST00000525435 MEIS2O14770 477 aa14.23□□□□□ -0.13
CCS-202ENST00000525435 FOSP01100 380 aaPredicted RBP14.23□□□□□ -0.13
CCS-202ENST00000525435 GJB1P08034 283 aa14.23□□□□□ -0.13
CCS-202ENST00000525435 CYBAP13498 195 aa14.23□□□□□ -0.13
CCS-202ENST00000525435 CCL5P13501 91 aa14.23□□□□□ -0.13
CCS-202ENST00000525435 EDNRBP24530 442 aa14.23□□□□□ -0.13
CCS-202ENST00000525435 ALDH5A1P51649 535 aaPredicted RBP14.23□□□□□ -0.13
CCS-202ENST00000525435 GALNT17Q6IS24 598 aa14.23□□□□□ -0.13
CCS-202ENST00000525435 SLC30A10Q6XR72 485 aa14.23□□□□□ -0.13
CCS-202ENST00000525435 NOL8Q76FK4 1167 aaKnown RBP14.23□□□□□ -0.13
CCS-202ENST00000525435 ARMCX2Q7L311 632 aa14.23□□□□□ -0.13
CCS-202ENST00000525435 NECAB1Q8N987 351 aa14.23□□□□□ -0.13
CCS-202ENST00000525435 CCDC148Q8NFR7 591 aa14.23□□□□□ -0.13
CCS-202ENST00000525435 SMARCC2Q8TAQ2 1214 aa14.23□□□□□ -0.13
CCS-202ENST00000525435 RMDN3Q96TC7 470 aa14.23□□□□□ -0.13
CCS-202ENST00000525435 RNF208Q9H0X6 261 aa14.23□□□□□ -0.13
CCS-202ENST00000525435 C6orf50Q9HD87 102 aa14.23□□□□□ -0.13
CCS-202ENST00000525435 PAK6Q9NQU5 681 aaPredicted RBP14.23□□□□□ -0.13
CCS-202ENST00000525435 HTTP42858 3142 aa14.23□□□□□ -0.13
CCS-202ENST00000525435 LARGE1O95461 756 aa14.22□□□□□ -0.13
CCS-202ENST00000525435 CTDNEP1O95476 244 aa14.22□□□□□ -0.13
CCS-202ENST00000525435 XBP1P17861 261 aa14.22□□□□□ -0.13
CCS-202ENST00000525435 TRIM32Q13049 653 aa14.22□□□□□ -0.13
CCS-202ENST00000525435 XRRA1Q6P2D8 792 aa14.22□□□□□ -0.13
CCS-202ENST00000525435 BICD2Q8TD16 824 aa14.22□□□□□ -0.13
CCS-202ENST00000525435 GPKOWQ92917 476 aaPredicted RBP eCLIP14.22□□□□□ -0.131e-10■■■□□ 18.6
CCS-202ENST00000525435 TAAR1Q96RJ0 339 aa14.22□□□□□ -0.13
CCS-202ENST00000525435 VTA1Q9NP79 307 aa14.22□□□□□ -0.13
CCS-202ENST00000525435 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.22□□□□□ -0.13
CCS-202ENST00000525435 COL20A1Q9P218 1284 aa14.22□□□□□ -0.13
CCS-202ENST00000525435 ZSWIM8A7E2V4 1837 aa14.22□□□□□ -0.13
CCS-202ENST00000525435 PLXNB2O15031 1838 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms