RNA–Protein interactions for RNA: ENST00000525378.5

NDUFS3-204, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 779 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-204ENST00000525378 TIFAQ96CG3 184 aa13.82□□□□□ -0.2
NDUFS3-204ENST00000525378 PBX4Q9BYU1 374 aa13.82□□□□□ -0.2
NDUFS3-204ENST00000525378 ZNF576Q9H609 170 aa13.82□□□□□ -0.2
NDUFS3-204ENST00000525378 CCDC171Q6TFL3 1326 aa13.82□□□□□ -0.2
NDUFS3-204ENST00000525378 TRIP12Q14669 1992 aaPredicted RBP13.82□□□□□ -0.2
NDUFS3-204ENST00000525378 ZEB2O60315 1214 aa13.81□□□□□ -0.2
NDUFS3-204ENST00000525378 SNHG28P0DPA3 235 aa13.81□□□□□ -0.2
NDUFS3-204ENST00000525378 CCL23P55773 120 aa13.81□□□□□ -0.2
NDUFS3-204ENST00000525378 ZNF543Q08ER8 600 aa13.81□□□□□ -0.2
NDUFS3-204ENST00000525378 DUSP28Q4G0W2 176 aa13.81□□□□□ -0.2
NDUFS3-204ENST00000525378 B4GALNT3Q6L9W6 998 aa13.81□□□□□ -0.2
NDUFS3-204ENST00000525378 PSRC1Q6PGN9 363 aaPredicted RBP13.81□□□□□ -0.2
NDUFS3-204ENST00000525378 TICAM2Q86XR7 235 aa13.81□□□□□ -0.2
NDUFS3-204ENST00000525378 USP38Q8NB14 1042 aa13.81□□□□□ -0.2
NDUFS3-204ENST00000525378 TRPV6Q9H1D0 765 aa13.81□□□□□ -0.2
NDUFS3-204ENST00000525378 HIPK3Q9H422 1215 aa13.81□□□□□ -0.2
NDUFS3-204ENST00000525378 IL23AQ9NPF7 189 aa13.81□□□□□ -0.2
NDUFS3-204ENST00000525378 CXXC1Q9P0U4 656 aaPredicted RBP13.81□□□□□ -0.2
NDUFS3-204ENST00000525378 KIAA1217Q5T5P2 1943 aa13.81□□□□□ -0.2
NDUFS3-204ENST00000525378 NEDD4P46934 1319 aa13.81□□□□□ -0.2
NDUFS3-204ENST00000525378 A0A0C4DFX4 3053 aa13.8□□□□□ -0.2
NDUFS3-204ENST00000525378 SDSP20132 328 aa13.8□□□□□ -0.2
NDUFS3-204ENST00000525378 CALML3P27482 149 aa13.8□□□□□ -0.2
NDUFS3-204ENST00000525378 MFSD6Q6ZSS7 791 aa13.8□□□□□ -0.2
NDUFS3-204ENST00000525378 SMC5Q8IY18 1101 aa13.8□□□□□ -0.2
NDUFS3-204ENST00000525378 HERVK_113Q902F9 699 aa13.8□□□□□ -0.2
NDUFS3-204ENST00000525378 TTC14Q96N46 770 aa13.8□□□□□ -0.2
NDUFS3-204ENST00000525378 ZKSCAN3Q9BRR0 538 aa13.8□□□□□ -0.2
NDUFS3-204ENST00000525378 NOC4LQ9BVI4 516 aaKnown RBP13.8□□□□□ -0.2
NDUFS3-204ENST00000525378 WDR11Q9BZH6 1224 aa13.8□□□□□ -0.2
NDUFS3-204ENST00000525378 WNT8AQ9H1J5 351 aa13.8□□□□□ -0.2
NDUFS3-204ENST00000525378 CPVLQ9H3G5 476 aa13.8□□□□□ -0.2
NDUFS3-204ENST00000525378 ADD3Q9UEY8 706 aaKnown RBP13.8□□□□□ -0.2
NDUFS3-204ENST00000525378 MYH7BA7E2Y1 1941 aa13.8□□□□□ -0.2
NDUFS3-204ENST00000525378 PRUNE2Q8WUY3 3088 aa13.79□□□□□ -0.2
NDUFS3-204ENST00000525378 RBM47A0AV96 593 aaKnown RBP13.79□□□□□ -0.2
NDUFS3-204ENST00000525378 IGHDP01880 384 aa13.79□□□□□ -0.2
NDUFS3-204ENST00000525378 GOLGA8HP0CJ92 632 aa13.79□□□□□ -0.2
NDUFS3-204ENST00000525378 RPS6P62753 249 aaKnown RBP13.79□□□□□ -0.2
NDUFS3-204ENST00000525378 RNF207Q6ZRF8 634 aa13.79□□□□□ -0.2
NDUFS3-204ENST00000525378 PLEKHM2Q8IWE5 1019 aa13.79□□□□□ -0.2
NDUFS3-204ENST00000525378 VWCEQ96DN2 955 aa13.79□□□□□ -0.2
NDUFS3-204ENST00000525378 TET1Q8NFU7 2136 aa13.78□□□□□ -0.2
NDUFS3-204ENST00000525378 LOC102724159A0A0B4J2E5 919 aa13.78□□□□□ -0.2
NDUFS3-204ENST00000525378 FGBP02675 491 aa13.78□□□□□ -0.2
NDUFS3-204ENST00000525378 MYL3P08590 195 aa13.78□□□□□ -0.2
NDUFS3-204ENST00000525378 PCP11498 1178 aaKnown RBP13.78□□□□□ -0.2
NDUFS3-204ENST00000525378 PURAQ00577 322 aaKnown RBP13.78□□□□□ -0.2
NDUFS3-204ENST00000525378 PWP2Q15269 919 aaKnown RBP13.78□□□□□ -0.2
NDUFS3-204ENST00000525378 OTOP2Q7RTS6 562 aa13.78□□□□□ -0.2
NDUFS3-204ENST00000525378 OR6J1Q8NGC5 347 aa13.78□□□□□ -0.2
NDUFS3-204ENST00000525378 PPP1R13LQ8WUF5 828 aa13.78□□□□□ -0.2
NDUFS3-204ENST00000525378 COPS5Q92905 334 aa13.78□□□□□ -0.2
NDUFS3-204ENST00000525378 SCLYQ96I15 445 aa13.78□□□□□ -0.2
NDUFS3-204ENST00000525378 SEZ6LQ9BYH1 1024 aa13.78□□□□□ -0.2
NDUFS3-204ENST00000525378 UBA5Q9GZZ9 404 aa13.78□□□□□ -0.2
NDUFS3-204ENST00000525378 ALDH8A1Q9H2A2 487 aaPredicted RBP13.78□□□□□ -0.2
NDUFS3-204ENST00000525378 TRMT13Q9NUP7 481 aaKnown RBP13.78□□□□□ -0.2
NDUFS3-204ENST00000525378 WDR19Q8NEZ3 1342 aa13.78□□□□□ -0.2
NDUFS3-204ENST00000525378 TANC1Q9C0D5 1861 aa13.78□□□□□ -0.2
NDUFS3-204ENST00000525378 ZNF213O14771 459 aa13.77□□□□□ -0.21
NDUFS3-204ENST00000525378 CYP2C9P11712 490 aa13.77□□□□□ -0.21
NDUFS3-204ENST00000525378 EDNRBP24530 442 aa13.77□□□□□ -0.21
NDUFS3-204ENST00000525378 PDE4DQ08499 809 aa13.77□□□□□ -0.21
NDUFS3-204ENST00000525378 USH1GQ495M9 461 aa13.77□□□□□ -0.21
NDUFS3-204ENST00000525378 CWC27Q6UX04 472 aaKnown RBP13.77□□□□□ -0.21
NDUFS3-204ENST00000525378 CHD1LQ86WJ1 897 aa13.77□□□□□ -0.21
NDUFS3-204ENST00000525378 ESR2Q92731 530 aa13.77□□□□□ -0.21
NDUFS3-204ENST00000525378 NKX2-4Q9H2Z4 354 aa13.77□□□□□ -0.21
NDUFS3-204ENST00000525378 OSBPL3Q9H4L5 887 aa13.77□□□□□ -0.21
NDUFS3-204ENST00000525378 RNF41Q9H4P4 317 aaPredicted RBP13.77□□□□□ -0.21
NDUFS3-204ENST00000525378 PRDM12Q9H4Q4 367 aa13.77□□□□□ -0.21
NDUFS3-204ENST00000525378 PRDM6Q9NQX0 595 aa13.77□□□□□ -0.21
NDUFS3-204ENST00000525378 POLR3EQ9NVU0 708 aa13.77□□□□□ -0.21
NDUFS3-204ENST00000525378 YBX2Q9Y2T7 364 aaKnown RBP13.77□□□□□ -0.21
NDUFS3-204ENST00000525378 PTPRSQ13332 1948 aa13.76□□□□□ -0.21
NDUFS3-204ENST00000525378 TNKSO95271 1327 aa13.76□□□□□ -0.21
NDUFS3-204ENST00000525378 KDM4AO75164 1064 aa13.76□□□□□ -0.21
NDUFS3-204ENST00000525378 CPT1AP50416 773 aa13.76□□□□□ -0.21
NDUFS3-204ENST00000525378 MFAP1P55081 439 aaKnown RBP13.76□□□□□ -0.21
NDUFS3-204ENST00000525378 GPATCH4Q5T3I0 446 aaKnown RBP13.76□□□□□ -0.21
NDUFS3-204ENST00000525378 DGKHQ86XP1 1220 aa13.76□□□□□ -0.21
NDUFS3-204ENST00000525378 DNERQ8NFT8 737 aa13.76□□□□□ -0.21
NDUFS3-204ENST00000525378 TBC1D5Q92609 795 aa13.76□□□□□ -0.21
NDUFS3-204ENST00000525378 RWDD1Q9H446 243 aaPredicted RBP13.76□□□□□ -0.21
NDUFS3-204ENST00000525378 MSRAQ9UJ68 235 aa13.76□□□□□ -0.21
NDUFS3-204ENST00000525378 PNMA2Q9UL42 364 aa13.76□□□□□ -0.21
NDUFS3-204ENST00000525378 VCANP13611 3396 aa13.76□□□□□ -0.21
NDUFS3-204ENST00000525378 B4E1Z4 1266 aa13.75□□□□□ -0.21
NDUFS3-204ENST00000525378 NKRFO15226 690 aaKnown RBP eCLIP13.75□□□□□ -0.21
NDUFS3-204ENST00000525378 ARIH2O95376 493 aa13.75□□□□□ -0.21
NDUFS3-204ENST00000525378 RABGGTBP53611 331 aa13.75□□□□□ -0.21
NDUFS3-204ENST00000525378 NUCB1Q02818 461 aa13.75□□□□□ -0.21
NDUFS3-204ENST00000525378 ADGRE1Q14246 886 aa13.75□□□□□ -0.21
NDUFS3-204ENST00000525378 PPP2R5BQ15173 497 aa13.75□□□□□ -0.21
NDUFS3-204ENST00000525378 RAB30Q15771 203 aa13.75□□□□□ -0.21
NDUFS3-204ENST00000525378 CDC37Q16543 378 aaPredicted RBP13.75□□□□□ -0.21
NDUFS3-204ENST00000525378 NBPF20Q3BBV1 942 aa13.75□□□□□ -0.21
NDUFS3-204ENST00000525378 PNMA1Q8ND90 353 aa13.75□□□□□ -0.21
NDUFS3-204ENST00000525378 PPM1EQ8WY54 764 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms