RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 KDRP35968 1356 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 SUPT3HO75486 399 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 SRGAP2BP0DMP2 458 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 TCP1P17987 556 aaKnown RBP14.86□□□□□ -0.03
LRRK1-202ENST00000525284 DEUP1Q05D60 604 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 CCDC51Q96ER9 411 aa14.86□□□□□ -0.03
LRRK1-202ENST00000525284 STX18Q9P2W9 335 aaKnown RBP14.86□□□□□ -0.03
LRRK1-202ENST00000525284 EXT2Q93063 718 aa14.85□□□□□ -0.03
LRRK1-202ENST00000525284 ABCC5O15440 1437 aa14.85□□□□□ -0.03
LRRK1-202ENST00000525284 PYGBP11216 843 aa14.85□□□□□ -0.03
LRRK1-202ENST00000525284 THOC5Q13769 683 aaKnown RBP14.85□□□□□ -0.03
LRRK1-202ENST00000525284 HACE1Q8IYU2 909 aa14.85□□□□□ -0.03
LRRK1-202ENST00000525284 ANKRD44Q8N8A2 993 aa14.85□□□□□ -0.03
LRRK1-202ENST00000525284 ENAHQ8N8S7 591 aaPredicted RBP14.85□□□□□ -0.03
LRRK1-202ENST00000525284 DNAAF3Q8N9W5 541 aa14.85□□□□□ -0.03
LRRK1-202ENST00000525284 JDP2Q8WYK2 163 aa14.85□□□□□ -0.03
LRRK1-202ENST00000525284 ARHGEF10LQ9HCE6 1279 aa14.85□□□□□ -0.03
LRRK1-202ENST00000525284 TTC41PQ6P2S7 1318 aa14.85□□□□□ -0.03
LRRK1-202ENST00000525284 MT-ND3P03897 115 aa14.85□□□□□ -0.03
LRRK1-202ENST00000525284 THOC1Q96FV9 657 aaKnown RBP14.85□□□□□ -0.03
LRRK1-202ENST00000525284 ACSBG1Q96GR2 724 aa14.85□□□□□ -0.03
LRRK1-202ENST00000525284 C1orf112Q9NSG2 853 aa14.85□□□□□ -0.03
LRRK1-202ENST00000525284 VCAM1P19320 739 aa14.85□□□□□ -0.03
LRRK1-202ENST00000525284 MAGOHBQ96A72 148 aaKnown RBP14.85□□□□□ -0.03
LRRK1-202ENST00000525284 CFAP36Q96G28 342 aa14.85□□□□□ -0.03
LRRK1-202ENST00000525284 HESX1Q9UBX0 185 aa14.85□□□□□ -0.03
LRRK1-202ENST00000525284 SERTAD1Q9UHV2 236 aa14.85□□□□□ -0.03
LRRK1-202ENST00000525284 PRR23D1E9PI22 279 aaPredicted RBP14.85□□□□□ -0.03
LRRK1-202ENST00000525284 PRR23D2P0DMB1 279 aaPredicted RBP14.85□□□□□ -0.03
LRRK1-202ENST00000525284 DMTNQ08495 405 aa14.85□□□□□ -0.03
LRRK1-202ENST00000525284 RUNDC3BQ96NL0 473 aa14.85□□□□□ -0.03
LRRK1-202ENST00000525284 MYL10Q9BUA6 226 aa14.85□□□□□ -0.03
LRRK1-202ENST00000525284 EFCAB14O75071 495 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 MESDQ14696 234 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 PLEKHM3Q6ZWE6 761 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 ANKRD13CQ8N6S4 541 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 PRPF38AQ8NAV1 312 aaKnown RBP14.84□□□□□ -0.03
LRRK1-202ENST00000525284 NFKBIL1Q9UBC1 381 aaPredicted RBP14.84□□□□□ -0.03
LRRK1-202ENST00000525284 PSDA5PKW4 1024 aaPredicted RBP14.84□□□□□ -0.03
LRRK1-202ENST00000525284 ZSCAN9O15535 394 aaPredicted RBP14.84□□□□□ -0.03
LRRK1-202ENST00000525284 HEXIM1O94992 359 aaKnown RBP14.84□□□□□ -0.03
LRRK1-202ENST00000525284 TNNC2P02585 160 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 APOA1P02647 267 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 MORC3Q14149 939 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 C8orf34Q49A92 452 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 PCGF5Q86SE9 256 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.84□□□□□ -0.03
LRRK1-202ENST00000525284 ATP11BQ9Y2G3 1177 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 CFBP00751 764 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 DYNC1I2Q13409 638 aaKnown RBP14.84□□□□□ -0.03
LRRK1-202ENST00000525284 CCNYQ8ND76 341 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 KCNV2Q8TDN2 545 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 PHKBQ93100 1093 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 SMYD3Q9H7B4 428 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 NOP53Q9NZM5 478 aaKnown RBP14.84□□□□□ -0.03
LRRK1-202ENST00000525284 KIF17Q9P2E2 1029 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 KCNJ14Q9UNX9 436 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 IQGAP2Q13576 1575 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 DLATP10515 647 aaKnown RBP14.84□□□□□ -0.03
LRRK1-202ENST00000525284 IFNA8P32881 189 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 PLTPP55058 493 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 GNPTABQ3T906 1256 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 CEP55Q53EZ4 464 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 NSMFQ6X4W1 530 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 SH3GL3Q99963 347 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 TRIM8Q9BZR9 551 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 STMN3Q9NZ72 180 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 TMEM247A6NEH6 219 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 ENC1O14682 589 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 HDDC2Q7Z4H3 204 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 PPM1KQ8N3J5 372 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 PPHLN1Q8NEY8 458 aaKnown RBP14.84□□□□□ -0.03
LRRK1-202ENST00000525284 CACTINQ8WUQ7 758 aaKnown RBP14.84□□□□□ -0.03
LRRK1-202ENST00000525284 ARMT1Q9H993 441 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 EPB41L5Q9HCM4 733 aa14.84□□□□□ -0.03
LRRK1-202ENST00000525284 NCOA1Q15788 1441 aa14.83□□□□□ -0.03
LRRK1-202ENST00000525284 SOX5P35711 763 aa14.83□□□□□ -0.03
LRRK1-202ENST00000525284 RGS9BPQ6ZS82 235 aa14.83□□□□□ -0.03
LRRK1-202ENST00000525284 OTUD6AQ7L8S5 288 aa14.83□□□□□ -0.03
LRRK1-202ENST00000525284 OR9Q1Q8NGQ5 310 aa14.83□□□□□ -0.03
LRRK1-202ENST00000525284 FAM167BQ9BTA0 163 aa14.83□□□□□ -0.03
LRRK1-202ENST00000525284 CUL7Q14999 1698 aa14.83□□□□□ -0.04
LRRK1-202ENST00000525284 hCG_1642624A0A1W2PR95 340 aa14.83□□□□□ -0.04
LRRK1-202ENST00000525284 KRT75O95678 551 aa14.83□□□□□ -0.04
LRRK1-202ENST00000525284 CHMLP26374 656 aa14.83□□□□□ -0.04
LRRK1-202ENST00000525284 LIG4P49917 911 aa14.83□□□□□ -0.04
LRRK1-202ENST00000525284 RASSF7Q02833 373 aa14.83□□□□□ -0.04
LRRK1-202ENST00000525284 IQCDQ96DY2 449 aa14.83□□□□□ -0.04
LRRK1-202ENST00000525284 ACTR5Q9H9F9 607 aaPredicted RBP14.83□□□□□ -0.04
LRRK1-202ENST00000525284 MRC2Q9UBG0 1479 aa14.83□□□□□ -0.04
LRRK1-202ENST00000525284 MCTP2Q6DN12 878 aa14.83□□□□□ -0.04
LRRK1-202ENST00000525284 GSDMAQ96QA5 445 aa14.83□□□□□ -0.04
LRRK1-202ENST00000525284 ZFYVE1Q9HBF4 777 aa14.83□□□□□ -0.04
LRRK1-202ENST00000525284 PRDM1O75626 825 aa14.83□□□□□ -0.04
LRRK1-202ENST00000525284 TMOD1P28289 359 aa14.83□□□□□ -0.04
LRRK1-202ENST00000525284 POLR2BP30876 1174 aaKnown RBP14.83□□□□□ -0.04
LRRK1-202ENST00000525284 CCDC15Q0P6D6 951 aa14.83□□□□□ -0.04
LRRK1-202ENST00000525284 KRT25Q7Z3Z0 450 aa14.83□□□□□ -0.04
LRRK1-202ENST00000525284 NUDCD1Q96RS6 583 aa14.83□□□□□ -0.04
LRRK1-202ENST00000525284 TEX12Q9BXU0 123 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms