RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 C9orf50Q5SZB4 431 aa14.67□□□□□ -0.06
SMCO4-202ENST00000525141 GPATCH4Q5T3I0 446 aaKnown RBP14.67□□□□□ -0.06
SMCO4-202ENST00000525141 SLC30A10Q6XR72 485 aa14.67□□□□□ -0.06
SMCO4-202ENST00000525141 STOX1Q6ZVD7 989 aa14.67□□□□□ -0.06
SMCO4-202ENST00000525141 FBXO16Q8IX29 292 aaPredicted RBP14.67□□□□□ -0.06
SMCO4-202ENST00000525141 MAP4K1Q92918 833 aa14.67□□□□□ -0.06
SMCO4-202ENST00000525141 TOX2Q96NM4 488 aa14.67□□□□□ -0.06
SMCO4-202ENST00000525141 KAT14Q9H8E8 782 aa14.67□□□□□ -0.06
SMCO4-202ENST00000525141 JMJD4Q9H9V9 463 aa14.67□□□□□ -0.06
SMCO4-202ENST00000525141 VAT1LQ9HCJ6 419 aa14.67□□□□□ -0.06
SMCO4-202ENST00000525141 ELP1O95163 1332 aa14.66□□□□□ -0.06
SMCO4-202ENST00000525141 WDR19Q8NEZ3 1342 aa14.66□□□□□ -0.06
SMCO4-202ENST00000525141 CALML3P27482 149 aa14.66□□□□□ -0.06
SMCO4-202ENST00000525141 COL9A3Q14050 684 aaPredicted RBP14.66□□□□□ -0.06
SMCO4-202ENST00000525141 RNF207Q6ZRF8 634 aa14.66□□□□□ -0.06
SMCO4-202ENST00000525141 KIAA1211Q6ZU35 1233 aa14.66□□□□□ -0.06
SMCO4-202ENST00000525141 RGS22Q8NE09 1264 aa14.66□□□□□ -0.06
SMCO4-202ENST00000525141 LBHD1Q9BQE6 289 aaPredicted RBP14.66□□□□□ -0.06
SMCO4-202ENST00000525141 CNNM2Q9H8M5 875 aa14.66□□□□□ -0.06
SMCO4-202ENST00000525141 PRDM5Q9NQX1 630 aaPredicted RBP14.66□□□□□ -0.06
SMCO4-202ENST00000525141 STARD7Q9NQZ5 370 aa14.66□□□□□ -0.06
SMCO4-202ENST00000525141 LTBP2Q14767 1821 aa14.66□□□□□ -0.06
SMCO4-202ENST00000525141 PTPDC1A2A3K4 754 aa14.65□□□□□ -0.06
SMCO4-202ENST00000525141 PALM3A6NDB9 673 aaPredicted RBP14.65□□□□□ -0.06
SMCO4-202ENST00000525141 E7EWF7 191 aa14.65□□□□□ -0.06
SMCO4-202ENST00000525141 PQBP1O60828 265 aaKnown RBP14.65□□□□□ -0.06
SMCO4-202ENST00000525141 CLTBP09497 229 aa14.65□□□□□ -0.06
SMCO4-202ENST00000525141 EDNRBP24530 442 aa14.65□□□□□ -0.06
SMCO4-202ENST00000525141 USH1GQ495M9 461 aa14.65□□□□□ -0.06
SMCO4-202ENST00000525141 Q7L0L9 218 aa14.65□□□□□ -0.06
SMCO4-202ENST00000525141 CHST3Q7LGC8 479 aa14.65□□□□□ -0.06
SMCO4-202ENST00000525141 SLC43A3Q8NBI5 491 aa14.65□□□□□ -0.06
SMCO4-202ENST00000525141 PCSK9Q8NBP7 692 aaKnown RBP14.65□□□□□ -0.06
SMCO4-202ENST00000525141 NUP133Q8WUM0 1156 aa14.65□□□□□ -0.06
SMCO4-202ENST00000525141 MTMR8Q96EF0 704 aa14.65□□□□□ -0.06
SMCO4-202ENST00000525141 COL20A1Q9P218 1284 aa14.65□□□□□ -0.06
SMCO4-202ENST00000525141 PRKAG2Q9UGJ0 569 aa14.65□□□□□ -0.06
SMCO4-202ENST00000525141 MAD2L2Q9UI95 211 aa14.65□□□□□ -0.06
SMCO4-202ENST00000525141 Q9Y3F1 56 aa14.65□□□□□ -0.06
SMCO4-202ENST00000525141 ARVCFO00192 962 aa14.64□□□□□ -0.07
SMCO4-202ENST00000525141 OPLAHO14841 1288 aa14.64□□□□□ -0.07
SMCO4-202ENST00000525141 PPP1R11O60927 126 aaPredicted RBP14.64□□□□□ -0.07
SMCO4-202ENST00000525141 ANTXR2P58335 489 aa14.64□□□□□ -0.07
SMCO4-202ENST00000525141 CDC37Q16543 378 aaPredicted RBP14.64□□□□□ -0.07
SMCO4-202ENST00000525141 QRICH1Q2TAL8 776 aa14.64□□□□□ -0.07
SMCO4-202ENST00000525141 ASPRV1Q53RT3 343 aa14.64□□□□□ -0.07
SMCO4-202ENST00000525141 GPR153Q6NV75 609 aa14.64□□□□□ -0.07
SMCO4-202ENST00000525141 CXCL17Q6UXB2 119 aa14.64□□□□□ -0.07
SMCO4-202ENST00000525141 NOL8Q76FK4 1167 aaKnown RBP14.64□□□□□ -0.07
SMCO4-202ENST00000525141 C16orf59Q7L2K0 433 aa14.64□□□□□ -0.07
SMCO4-202ENST00000525141 IGDCC4Q8TDY8 1250 aa14.64□□□□□ -0.07
SMCO4-202ENST00000525141 GLT1D1Q96MS3 346 aa14.64□□□□□ -0.07
SMCO4-202ENST00000525141 TAAR1Q96RJ0 339 aa14.64□□□□□ -0.07
SMCO4-202ENST00000525141 VTA1Q9NP79 307 aa14.64□□□□□ -0.07
SMCO4-202ENST00000525141 TMEM39AQ9NV64 488 aa14.64□□□□□ -0.07
SMCO4-202ENST00000525141 PNMA2Q9UL42 364 aa14.64□□□□□ -0.07
SMCO4-202ENST00000525141 LAMA2P24043 3122 aaKnown RBP14.64□□□□□ -0.07
SMCO4-202ENST00000525141 BAZ2BQ9UIF8 2168 aaKnown RBP14.64□□□□□ -0.07
SMCO4-202ENST00000525141 LOC102724159A0A0B4J2E5 919 aa14.63□□□□□ -0.07
SMCO4-202ENST00000525141 KLRF2D3W0D1 207 aa14.63□□□□□ -0.07
SMCO4-202ENST00000525141 CD4P01730 458 aa14.63□□□□□ -0.07
SMCO4-202ENST00000525141 PARP1P09874 1014 aaKnown RBP14.63□□□□□ -0.07
SMCO4-202ENST00000525141 PWP2Q15269 919 aaKnown RBP14.63□□□□□ -0.07
SMCO4-202ENST00000525141 DUSP28Q4G0W2 176 aa14.63□□□□□ -0.07
SMCO4-202ENST00000525141 IFIT1BQ5T764 474 aaKnown RBP14.63□□□□□ -0.07
SMCO4-202ENST00000525141 TLK2Q86UE8 772 aa14.63□□□□□ -0.07
SMCO4-202ENST00000525141 SYTL5Q8TDW5 730 aaPredicted RBP14.63□□□□□ -0.07
SMCO4-202ENST00000525141 VTI1AQ96AJ9 217 aa14.63□□□□□ -0.07
SMCO4-202ENST00000525141 UBAC1Q9BSL1 405 aa14.63□□□□□ -0.07
SMCO4-202ENST00000525141 WDR11Q9BZH6 1224 aa14.63□□□□□ -0.07
SMCO4-202ENST00000525141 LSG1Q9H089 658 aaKnown RBP14.63□□□□□ -0.07
SMCO4-202ENST00000525141 SPC25Q9HBM1 224 aa14.63□□□□□ -0.07
SMCO4-202ENST00000525141 GPHNQ9NQX3 736 aaPredicted RBP14.63□□□□□ -0.07
SMCO4-202ENST00000525141 ADD3Q9UEY8 706 aaKnown RBP14.63□□□□□ -0.07
SMCO4-202ENST00000525141 TBX21Q9UL17 535 aa14.63□□□□□ -0.07
SMCO4-202ENST00000525141 LRRC37A2A6NM11 1700 aa14.62□□□□□ -0.07
SMCO4-202ENST00000525141 DCDC2CA8MYV0 355 aa14.62□□□□□ -0.07
SMCO4-202ENST00000525141 FSCN1Q16658 493 aaKnown RBP14.62□□□□□ -0.07
SMCO4-202ENST00000525141 FAM126BQ8IXS8 530 aa14.62□□□□□ -0.07
SMCO4-202ENST00000525141 MB21D2Q8IYB1 491 aaPredicted RBP14.62□□□□□ -0.07
SMCO4-202ENST00000525141 DNERQ8NFT8 737 aa14.62□□□□□ -0.07
SMCO4-202ENST00000525141 COPS5Q92905 334 aa14.62□□□□□ -0.07
SMCO4-202ENST00000525141 AP5M1Q9H0R1 490 aa14.62□□□□□ -0.07
SMCO4-202ENST00000525141 MTMR10Q9NXD2 777 aa14.62□□□□□ -0.07
SMCO4-202ENST00000525141 RBM8AQ9Y5S9 174 aaKnown RBP14.62□□□□□ -0.07
SMCO4-202ENST00000525141 A0A0U1RQG5 324 aaPredicted RBP14.61□□□□□ -0.07
SMCO4-202ENST00000525141 IFIT3O14879 490 aaKnown RBP14.61□□□□□ -0.07
SMCO4-202ENST00000525141 CYTH3O43739 400 aa14.61□□□□□ -0.07
SMCO4-202ENST00000525141 ARIH2O95376 493 aa14.61□□□□□ -0.07
SMCO4-202ENST00000525141 TIMP1P01033 207 aa14.61□□□□□ -0.07
SMCO4-202ENST00000525141 RAG1P15918 1043 aa14.61□□□□□ -0.07
SMCO4-202ENST00000525141 PSMC6P62333 389 aa14.61□□□□□ -0.07
SMCO4-202ENST00000525141 TROAPQ12815 778 aa14.61□□□□□ -0.07
SMCO4-202ENST00000525141 CCDC62Q6P9F0 684 aa14.61□□□□□ -0.07
SMCO4-202ENST00000525141 FBXO11Q86XK2 927 aa14.61□□□□□ -0.07
SMCO4-202ENST00000525141 DEFB123Q8N688 67 aa14.61□□□□□ -0.07
SMCO4-202ENST00000525141 RIOX1Q9H6W3 641 aa14.61□□□□□ -0.07
SMCO4-202ENST00000525141 ABCB11O95342 1321 aa14.61□□□□□ -0.07
SMCO4-202ENST00000525141 ITGA7Q13683 1181 aa14.6□□□□□ -0.07
SMCO4-202ENST00000525141 GRM4Q14833 912 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms