RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 PWP2Q15269 919 aaKnown RBP19.12■□□□□ 0.65
HIF3A-208ENST00000524533 TMEM240Q5SV17 173 aa19.12■□□□□ 0.65
HIF3A-208ENST00000524533 TMEM63BQ5T3F8 832 aa19.12■□□□□ 0.65
HIF3A-208ENST00000524533 C16orf59Q7L2K0 433 aa19.12■□□□□ 0.65
HIF3A-208ENST00000524533 SEZ6LQ9BYH1 1024 aa19.12■□□□□ 0.65
HIF3A-208ENST00000524533 WDR19Q8NEZ3 1342 aa19.11■□□□□ 0.65
HIF3A-208ENST00000524533 ACRP10323 421 aa19.11■□□□□ 0.65
HIF3A-208ENST00000524533 CALML3P27482 149 aa19.11■□□□□ 0.65
HIF3A-208ENST00000524533 CYP2C18P33260 490 aa19.11■□□□□ 0.65
HIF3A-208ENST00000524533 DUSP28Q4G0W2 176 aa19.11■□□□□ 0.65
HIF3A-208ENST00000524533 RNF207Q6ZRF8 634 aa19.11■□□□□ 0.65
HIF3A-208ENST00000524533 ESR2Q92731 530 aa19.11■□□□□ 0.65
HIF3A-208ENST00000524533 TIFAQ96CG3 184 aa19.11■□□□□ 0.65
HIF3A-208ENST00000524533 COL25A1Q9BXS0 654 aaPredicted RBP19.11■□□□□ 0.65
HIF3A-208ENST00000524533 HIPK3Q9H422 1215 aa19.11■□□□□ 0.65
HIF3A-208ENST00000524533 GRIN2DO15399 1336 aa19.1■□□□□ 0.65
HIF3A-208ENST00000524533 SNHG28P0DPA3 235 aa19.1■□□□□ 0.65
HIF3A-208ENST00000524533 PSMC6P62333 389 aa19.1■□□□□ 0.65
HIF3A-208ENST00000524533 RASIP1Q5U651 963 aa19.1■□□□□ 0.65
HIF3A-208ENST00000524533 ZNF365Q70YC5 407 aa19.1■□□□□ 0.65
HIF3A-208ENST00000524533 CHD1LQ86WJ1 897 aa19.1■□□□□ 0.65
HIF3A-208ENST00000524533 CLEC4DQ8WXI8 215 aa19.1■□□□□ 0.65
HIF3A-208ENST00000524533 MPHOSPH6Q99547 160 aaKnown RBP19.1■□□□□ 0.65
HIF3A-208ENST00000524533 ZKSCAN3Q9BRR0 538 aa19.1■□□□□ 0.65
HIF3A-208ENST00000524533 WDR11Q9BZH6 1224 aa19.1■□□□□ 0.65
HIF3A-208ENST00000524533 IL23AQ9NPF7 189 aa19.1■□□□□ 0.65
HIF3A-208ENST00000524533 UMODL1Q5DID0 1318 aa19.09■□□□□ 0.65
HIF3A-208ENST00000524533 ZNF213O14771 459 aa19.09■□□□□ 0.65
HIF3A-208ENST00000524533 GPATCH4Q5T3I0 446 aaKnown RBP19.09■□□□□ 0.65
HIF3A-208ENST00000524533 PLEKHM2Q8IWE5 1019 aa19.09■□□□□ 0.65
HIF3A-208ENST00000524533 YTHDC1Q96MU7 727 aaKnown RBP19.09■□□□□ 0.65
HIF3A-208ENST00000524533 TRPV6Q9H1D0 765 aa19.09■□□□□ 0.65
HIF3A-208ENST00000524533 OSBPL3Q9H4L5 887 aa19.09■□□□□ 0.65
HIF3A-208ENST00000524533 DIAPH3Q9NSV4 1193 aa19.09■□□□□ 0.65
HIF3A-208ENST00000524533 POLR3EQ9NVU0 708 aa19.09■□□□□ 0.65
HIF3A-208ENST00000524533 B4GALT4O60513 344 aa19.08■□□□□ 0.64
HIF3A-208ENST00000524533 GOLGA8HP0CJ92 632 aa19.08■□□□□ 0.64
HIF3A-208ENST00000524533 NT5C2P49902 561 aa19.08■□□□□ 0.64
HIF3A-208ENST00000524533 CPT1AP50416 773 aa19.08■□□□□ 0.64
HIF3A-208ENST00000524533 NUCB1Q02818 461 aa19.08■□□□□ 0.64
HIF3A-208ENST00000524533 PDE4DQ08499 809 aa19.08■□□□□ 0.64
HIF3A-208ENST00000524533 GRIN2CQ14957 1233 aa19.08■□□□□ 0.64
HIF3A-208ENST00000524533 USH1GQ495M9 461 aa19.08■□□□□ 0.64
HIF3A-208ENST00000524533 CWC27Q6UX04 472 aaKnown RBP19.08■□□□□ 0.64
HIF3A-208ENST00000524533 DGKHQ86XP1 1220 aa19.08■□□□□ 0.64
HIF3A-208ENST00000524533 NOC4LQ9BVI4 516 aaKnown RBP19.08■□□□□ 0.64
HIF3A-208ENST00000524533 PBX4Q9BYU1 374 aa19.08■□□□□ 0.64
HIF3A-208ENST00000524533 MTIF3Q9H2K0 278 aaKnown RBP19.08■□□□□ 0.64
HIF3A-208ENST00000524533 ZNF576Q9H609 170 aa19.08■□□□□ 0.64
HIF3A-208ENST00000524533 GBF1Q92538 1859 aa19.07■□□□□ 0.64
HIF3A-208ENST00000524533 RBM47A0AV96 593 aaKnown RBP19.07■□□□□ 0.64
HIF3A-208ENST00000524533 GRXCR1A8MXD5 290 aa19.07■□□□□ 0.64
HIF3A-208ENST00000524533 CCL23P55773 120 aa19.07■□□□□ 0.64
HIF3A-208ENST00000524533 RPS6P62753 249 aaKnown RBP19.07■□□□□ 0.64
HIF3A-208ENST00000524533 PPP2R5BQ15173 497 aa19.07■□□□□ 0.64
HIF3A-208ENST00000524533 IQCA1Q86XH1 822 aa19.07■□□□□ 0.64
HIF3A-208ENST00000524533 PNMA1Q8ND90 353 aa19.07■□□□□ 0.64
HIF3A-208ENST00000524533 OR6J1Q8NGC5 347 aa19.07■□□□□ 0.64
HIF3A-208ENST00000524533 RAD50Q92878 1312 aa19.06■□□□□ 0.64
HIF3A-208ENST00000524533 HIP1O00291 1037 aa19.06■□□□□ 0.64
HIF3A-208ENST00000524533 KDM4AO75164 1064 aa19.06■□□□□ 0.64
HIF3A-208ENST00000524533 IGHDP01880 384 aa19.06■□□□□ 0.64
HIF3A-208ENST00000524533 FGBP02675 491 aa19.06■□□□□ 0.64
HIF3A-208ENST00000524533 MYL3P08590 195 aa19.06■□□□□ 0.64
HIF3A-208ENST00000524533 EDNRBP24530 442 aa19.06■□□□□ 0.64
HIF3A-208ENST00000524533 PBX2P40425 430 aa19.06■□□□□ 0.64
HIF3A-208ENST00000524533 PURAQ00577 322 aaKnown RBP19.06■□□□□ 0.64
HIF3A-208ENST00000524533 CCDC178Q5BJE1 867 aa19.06■□□□□ 0.64
HIF3A-208ENST00000524533 DNERQ8NFT8 737 aa19.06■□□□□ 0.64
HIF3A-208ENST00000524533 HERVK_113Q902F9 699 aa19.06■□□□□ 0.64
HIF3A-208ENST00000524533 WNT8AQ9H1J5 351 aa19.06■□□□□ 0.64
HIF3A-208ENST00000524533 ALDH8A1Q9H2A2 487 aaPredicted RBP19.06■□□□□ 0.64
HIF3A-208ENST00000524533 CPVLQ9H3G5 476 aa19.06■□□□□ 0.64
HIF3A-208ENST00000524533 KAT14Q9H8E8 782 aa19.06■□□□□ 0.64
HIF3A-208ENST00000524533 PRUNE2Q8WUY3 3088 aa19.05■□□□□ 0.64
HIF3A-208ENST00000524533 B4DLN1 442 aa19.05■□□□□ 0.64
HIF3A-208ENST00000524533 NKRFO15226 690 aaKnown RBP eCLIP19.05■□□□□ 0.64
HIF3A-208ENST00000524533 MRPL12P52815 198 aaKnown RBP19.05■□□□□ 0.64
HIF3A-208ENST00000524533 RAB30Q15771 203 aa19.05■□□□□ 0.64
HIF3A-208ENST00000524533 BRDTQ58F21 947 aaPredicted RBP19.05■□□□□ 0.64
HIF3A-208ENST00000524533 SCFD2Q8WU76 684 aa19.05■□□□□ 0.64
HIF3A-208ENST00000524533 MTG1Q9BT17 334 aaPredicted RBP19.05■□□□□ 0.64
HIF3A-208ENST00000524533 UBA5Q9GZZ9 404 aa19.05■□□□□ 0.64
HIF3A-208ENST00000524533 GPHNQ9NQX3 736 aaPredicted RBP19.05■□□□□ 0.64
HIF3A-208ENST00000524533 CXXC1Q9P0U4 656 aaPredicted RBP19.05■□□□□ 0.64
HIF3A-208ENST00000524533 MYH6P13533 1939 aa19.05■□□□□ 0.64
HIF3A-208ENST00000524533 CHD9Q3L8U1 2897 aa19.05■□□□□ 0.64
HIF3A-208ENST00000524533 B4E1Z4 1266 aa19.04■□□□□ 0.64
HIF3A-208ENST00000524533 SUPT20HL2P0C7V6 817 aa19.04■□□□□ 0.64
HIF3A-208ENST00000524533 CDC37Q16543 378 aaPredicted RBP19.04■□□□□ 0.64
HIF3A-208ENST00000524533 OTOP2Q7RTS6 562 aa19.04■□□□□ 0.64
HIF3A-208ENST00000524533 DSCC1Q9BVC3 393 aa19.04■□□□□ 0.64
HIF3A-208ENST00000524533 TANC1Q9C0D5 1861 aa19.04■□□□□ 0.64
HIF3A-208ENST00000524533 TRMT13Q9NUP7 481 aaKnown RBP19.04■□□□□ 0.64
HIF3A-208ENST00000524533 MSRAQ9UJ68 235 aa19.04■□□□□ 0.64
HIF3A-208ENST00000524533 SCN10AQ9Y5Y9 1956 aa19.04■□□□□ 0.64
HIF3A-208ENST00000524533 TNKSO95271 1327 aa19.03■□□□□ 0.64
HIF3A-208ENST00000524533 ABCB11O95342 1321 aa19.03■□□□□ 0.64
HIF3A-208ENST00000524533 IMMTQ16891 758 aaKnown RBP19.03■□□□□ 0.64
HIF3A-208ENST00000524533 ASPRV1Q53RT3 343 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms