RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 ZKSCAN3Q9BRR0 538 aa11.35□□□□□ -0.59
CNKSR1-209ENST00000524529 CPVLQ9H3G5 476 aa11.35□□□□□ -0.59
CNKSR1-209ENST00000524529 TRIP12Q14669 1992 aaPredicted RBP11.35□□□□□ -0.59
CNKSR1-209ENST00000524529 UMODL1Q5DID0 1318 aa11.35□□□□□ -0.59
CNKSR1-209ENST00000524529 DYNC1LI2O43237 492 aaPredicted RBP11.34□□□□□ -0.59
CNKSR1-209ENST00000524529 CSF2RAP15509 400 aa11.34□□□□□ -0.59
CNKSR1-209ENST00000524529 ALDH5A1P51649 535 aaPredicted RBP11.34□□□□□ -0.59
CNKSR1-209ENST00000524529 TMEM240Q5SV17 173 aa11.34□□□□□ -0.59
CNKSR1-209ENST00000524529 MFSD5Q6N075 450 aa11.34□□□□□ -0.59
CNKSR1-209ENST00000524529 VTI1AQ96AJ9 217 aa11.34□□□□□ -0.59
CNKSR1-209ENST00000524529 VWCEQ96DN2 955 aa11.34□□□□□ -0.59
CNKSR1-209ENST00000524529 PPP1R12CQ9BZL4 782 aa11.34□□□□□ -0.59
CNKSR1-209ENST00000524529 SPC25Q9HBM1 224 aa11.34□□□□□ -0.59
CNKSR1-209ENST00000524529 GTF3C3Q9Y5Q9 886 aa11.34□□□□□ -0.59
CNKSR1-209ENST00000524529 MYH7BA7E2Y1 1941 aa11.33□□□□□ -0.6
CNKSR1-209ENST00000524529 HIP1O00291 1037 aa11.33□□□□□ -0.6
CNKSR1-209ENST00000524529 GOLGA8HP0CJ92 632 aa11.33□□□□□ -0.6
CNKSR1-209ENST00000524529 ACRP10323 421 aa11.33□□□□□ -0.6
CNKSR1-209ENST00000524529 PSMC6P62333 389 aa11.33□□□□□ -0.6
CNKSR1-209ENST00000524529 FSCN1Q16658 493 aaKnown RBP11.33□□□□□ -0.6
CNKSR1-209ENST00000524529 RASIP1Q5U651 963 aa11.33□□□□□ -0.6
CNKSR1-209ENST00000524529 IQSEC1Q6DN90 963 aa11.33□□□□□ -0.6
CNKSR1-209ENST00000524529 CWC27Q6UX04 472 aaKnown RBP11.33□□□□□ -0.6
CNKSR1-209ENST00000524529 MFSD6Q6ZSS7 791 aa11.33□□□□□ -0.6
CNKSR1-209ENST00000524529 NOL8Q76FK4 1167 aaKnown RBP11.33□□□□□ -0.6
CNKSR1-209ENST00000524529 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.33□□□□□ -0.6
CNKSR1-209ENST00000524529 MYLIPQ8WY64 445 aa11.33□□□□□ -0.6
CNKSR1-209ENST00000524529 TTC14Q96N46 770 aa11.33□□□□□ -0.6
CNKSR1-209ENST00000524529 MROH7Q68CQ1 1323 aa11.33□□□□□ -0.6
CNKSR1-209ENST00000524529 CHD9Q3L8U1 2897 aa11.32□□□□□ -0.6
CNKSR1-209ENST00000524529 RBM47A0AV96 593 aaKnown RBP11.32□□□□□ -0.6
CNKSR1-209ENST00000524529 GRXCR1A8MXD5 290 aa11.32□□□□□ -0.6
CNKSR1-209ENST00000524529 CYP2C18P33260 490 aa11.32□□□□□ -0.6
CNKSR1-209ENST00000524529 RPS6P62753 249 aaKnown RBP11.32□□□□□ -0.6
CNKSR1-209ENST00000524529 ITGA7Q13683 1181 aa11.32□□□□□ -0.6
CNKSR1-209ENST00000524529 DUSP28Q4G0W2 176 aa11.32□□□□□ -0.6
CNKSR1-209ENST00000524529 BMP2KLQ5H9B9 411 aa11.32□□□□□ -0.6
CNKSR1-209ENST00000524529 KIAA1211Q6ZU35 1233 aa11.32□□□□□ -0.6
CNKSR1-209ENST00000524529 TBC1D5Q92609 795 aa11.32□□□□□ -0.6
CNKSR1-209ENST00000524529 UBA5Q9GZZ9 404 aa11.32□□□□□ -0.6
CNKSR1-209ENST00000524529 VTA1Q9NP79 307 aa11.32□□□□□ -0.6
CNKSR1-209ENST00000524529 Q9Y3F1 56 aa11.32□□□□□ -0.6
CNKSR1-209ENST00000524529 TTC28Q96AY4 2481 aa11.32□□□□□ -0.6
CNKSR1-209ENST00000524529 WDR19Q8NEZ3 1342 aa11.32□□□□□ -0.6
CNKSR1-209ENST00000524529 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.31□□□□□ -0.6
CNKSR1-209ENST00000524529 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.31□□□□□ -0.6
CNKSR1-209ENST00000524529 PTPDC1A2A3K4 754 aa11.31□□□□□ -0.6
CNKSR1-209ENST00000524529 B4E1Z4 1266 aa11.31□□□□□ -0.6
CNKSR1-209ENST00000524529 B4GALT4O60513 344 aa11.31□□□□□ -0.6
CNKSR1-209ENST00000524529 KDM4AO75164 1064 aa11.31□□□□□ -0.6
CNKSR1-209ENST00000524529 PCP11498 1178 aaKnown RBP11.31□□□□□ -0.6
CNKSR1-209ENST00000524529 EDNRBP24530 442 aa11.31□□□□□ -0.6
CNKSR1-209ENST00000524529 DNAJB2P25686 324 aa11.31□□□□□ -0.6
CNKSR1-209ENST00000524529 CALML3P27482 149 aa11.31□□□□□ -0.6
CNKSR1-209ENST00000524529 PBX2P40425 430 aa11.31□□□□□ -0.6
CNKSR1-209ENST00000524529 GRIN2CQ14957 1233 aa11.31□□□□□ -0.6
CNKSR1-209ENST00000524529 ZNF365Q70YC5 407 aa11.31□□□□□ -0.6
CNKSR1-209ENST00000524529 PPP1R13LQ8WUF5 828 aa11.31□□□□□ -0.6
CNKSR1-209ENST00000524529 ANKS1AQ92625 1134 aa11.31□□□□□ -0.6
CNKSR1-209ENST00000524529 AP5M1Q9H0R1 490 aa11.31□□□□□ -0.6
CNKSR1-209ENST00000524529 TRPV6Q9H1D0 765 aa11.31□□□□□ -0.6
CNKSR1-209ENST00000524529 WNT8AQ9H1J5 351 aa11.31□□□□□ -0.6
CNKSR1-209ENST00000524529 CHD7Q9P2D1 2997 aa11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 RBAK-RBAKDNI3L0D1 243 aa11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 ZNF213O14771 459 aa11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 CABYRO75952 493 aa11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 ARIH2O95376 493 aa11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 PURAQ00577 322 aaKnown RBP11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 PPIGQ13427 754 aaKnown RBP eCLIP11.3□□□□□ -0.62e-7■■□□□ 13.1
CNKSR1-209ENST00000524529 USH1GQ495M9 461 aa11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 RNF207Q6ZRF8 634 aa11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 DGKHQ86XP1 1220 aa11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 MAFAQ8NHW3 353 aaPredicted RBP11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 ESR2Q92731 530 aa11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 COPS5Q92905 334 aa11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 DSCC1Q9BVC3 393 aa11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 NOC4LQ9BVI4 516 aaKnown RBP11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 PBX4Q9BYU1 374 aa11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 WDR11Q9BZH6 1224 aa11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 RNF41Q9H4P4 317 aaPredicted RBP11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 CXXC1Q9P0U4 656 aaPredicted RBP11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 ZSWIM5Q9P217 1185 aa11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 COL20A1Q9P218 1284 aa11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 PTPRSQ13332 1948 aa11.3□□□□□ -0.6
CNKSR1-209ENST00000524529 TANC1Q9C0D5 1861 aa11.29□□□□□ -0.6
CNKSR1-209ENST00000524529 TMEM265A0A087WTH1 108 aa11.29□□□□□ -0.6
CNKSR1-209ENST00000524529 LOC102724159A0A0B4J2E5 919 aa11.29□□□□□ -0.6
CNKSR1-209ENST00000524529 TLR3O15455 904 aaKnown RBP11.29□□□□□ -0.6
CNKSR1-209ENST00000524529 MFAP1P55081 439 aaKnown RBP11.29□□□□□ -0.6
CNKSR1-209ENST00000524529 CCL23P55773 120 aa11.29□□□□□ -0.6
CNKSR1-209ENST00000524529 PWP2Q15269 919 aaKnown RBP11.29□□□□□ -0.6
CNKSR1-209ENST00000524529 CDC37Q16543 378 aaPredicted RBP11.29□□□□□ -0.6
CNKSR1-209ENST00000524529 ADGRF4Q8IZF3 695 aa11.29□□□□□ -0.6
CNKSR1-209ENST00000524529 TMEM199Q8N511 208 aa11.29□□□□□ -0.6
CNKSR1-209ENST00000524529 ENAHQ8N8S7 591 aaPredicted RBP11.29□□□□□ -0.6
CNKSR1-209ENST00000524529 PNMA1Q8ND90 353 aa11.29□□□□□ -0.6
CNKSR1-209ENST00000524529 ALDH8A1Q9H2A2 487 aaPredicted RBP11.29□□□□□ -0.6
CNKSR1-209ENST00000524529 HIPK3Q9H422 1215 aa11.29□□□□□ -0.6
CNKSR1-209ENST00000524529 IL23AQ9NPF7 189 aa11.29□□□□□ -0.6
CNKSR1-209ENST00000524529 DIAPH3Q9NSV4 1193 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms