RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 VMACQ2NL98 169 aa5.08□□□□□ -1.6
LINCR-0001-203ENST00000524047 ERICH6BQ5W0A0 696 aa5.08□□□□□ -1.6
LINCR-0001-203ENST00000524047 PAQR3Q6TCH7 311 aa5.08□□□□□ -1.6
LINCR-0001-203ENST00000524047 VPS37DQ86XT2 251 aa5.08□□□□□ -1.6
LINCR-0001-203ENST00000524047 FEZF2Q8TBJ5 459 aa5.08□□□□□ -1.6
LINCR-0001-203ENST00000524047 FGD4Q96M96 766 aa5.08□□□□□ -1.6
LINCR-0001-203ENST00000524047 GBP3Q9H0R5 595 aa5.08□□□□□ -1.6
LINCR-0001-203ENST00000524047 STRIP2Q9ULQ0 834 aa5.08□□□□□ -1.6
LINCR-0001-203ENST00000524047 SF3B6Q9Y3B4 125 aaKnown RBP5.08□□□□□ -1.6
LINCR-0001-203ENST00000524047 MRVI1Q9Y6F6 885 aa5.08□□□□□ -1.6
LINCR-0001-203ENST00000524047 A0A1W2PQ27 194 aa5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 A0A1W2PQ64 194 aa5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 A0A1W2PQC6 194 aa5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 A0A1W2PQD8 194 aa5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 ZC3H12DA2A288 527 aaKnown RBP5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 FGF10O15520 208 aaPredicted RBP5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 CYBBP04839 570 aa5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 SSBP05455 408 aaKnown RBP eCLIP5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 CD3EP07766 207 aa5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 NCKAP1LP55160 1127 aa5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 CORO7P57737 925 aa5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 TARBP2Q15633 366 aaKnown RBP5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 SKOR2Q2VWA4 1001 aaPredicted RBP5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 VHLLQ6RSH7 139 aa5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 JAMLQ86YT9 394 aa5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 NLGN1Q8N2Q7 840 aa5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 TP53I13Q8NBR0 393 aaPredicted RBP5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 NLGN2Q8NFZ4 835 aa5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 TEPSINQ96N21 525 aa5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 PDLIM7Q9NR12 457 aa5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 WHRNQ9P202 907 aa5.07□□□□□ -1.6
LINCR-0001-203ENST00000524047 PPM1BO75688 479 aa5.06□□□□□ -1.6
LINCR-0001-203ENST00000524047 CELA3BP08861 270 aa5.06□□□□□ -1.6
LINCR-0001-203ENST00000524047 DBHP09172 617 aa5.06□□□□□ -1.6
LINCR-0001-203ENST00000524047 IFNGR1P15260 489 aa5.06□□□□□ -1.6
LINCR-0001-203ENST00000524047 FBLN1P23142 703 aa5.06□□□□□ -1.6
LINCR-0001-203ENST00000524047 ZNF200P98182 395 aaPredicted RBP5.06□□□□□ -1.6
LINCR-0001-203ENST00000524047 KIAA1211LQ6NV74 962 aa5.06□□□□□ -1.6
LINCR-0001-203ENST00000524047 DBX2Q6ZNG2 339 aa5.06□□□□□ -1.6
LINCR-0001-203ENST00000524047 FRMD5Q7Z6J6 570 aa5.06□□□□□ -1.6
LINCR-0001-203ENST00000524047 SYT8Q8NBV8 401 aa5.06□□□□□ -1.6
LINCR-0001-203ENST00000524047 KLHL6Q8WZ60 621 aa5.06□□□□□ -1.6
LINCR-0001-203ENST00000524047 FCRL3Q96P31 734 aaPredicted RBP5.06□□□□□ -1.6
LINCR-0001-203ENST00000524047 KLHL25Q9H0H3 589 aa5.06□□□□□ -1.6
LINCR-0001-203ENST00000524047 JAG2Q9Y219 1238 aa5.06□□□□□ -1.6
LINCR-0001-203ENST00000524047 SUGT1Q9Y2Z0 365 aa5.06□□□□□ -1.6
LINCR-0001-203ENST00000524047 CCDC88BA6NC98 1476 aa5.06□□□□□ -1.6
LINCR-0001-203ENST00000524047 A0A087WZG4 1122 aa5.05□□□□□ -1.6
LINCR-0001-203ENST00000524047 FFAR3O14843 346 aa5.05□□□□□ -1.6
LINCR-0001-203ENST00000524047 CASP7P55210 303 aa5.05□□□□□ -1.6
LINCR-0001-203ENST00000524047 POU4F1Q01851 419 aa5.05□□□□□ -1.6
LINCR-0001-203ENST00000524047 ZDHHC14Q8IZN3 488 aa5.05□□□□□ -1.6
LINCR-0001-203ENST00000524047 PTCHD1Q96NR3 888 aa5.05□□□□□ -1.6
LINCR-0001-203ENST00000524047 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.05□□□□□ -1.6
LINCR-0001-203ENST00000524047 DIS3Q9Y2L1 958 aaKnown RBP5.05□□□□□ -1.6
LINCR-0001-203ENST00000524047 PRDM2Q13029 1718 aa5.04□□□□□ -1.6
LINCR-0001-203ENST00000524047 A0A1W2PQJ5 194 aa5.04□□□□□ -1.6
LINCR-0001-203ENST00000524047 STXBP3O00186 592 aa5.04□□□□□ -1.6
LINCR-0001-203ENST00000524047 SMAD7O15105 426 aaKnown RBP5.04□□□□□ -1.6
LINCR-0001-203ENST00000524047 VAMP4O75379 141 aa5.04□□□□□ -1.6
LINCR-0001-203ENST00000524047 TBC1D8O95759 1140 aa5.04□□□□□ -1.6
LINCR-0001-203ENST00000524047 DPY19L1Q2PZI1 675 aa5.04□□□□□ -1.6
LINCR-0001-203ENST00000524047 LARP1BQ659C4 914 aaKnown RBP5.04□□□□□ -1.6
LINCR-0001-203ENST00000524047 PPP1R14AQ96A00 147 aa5.04□□□□□ -1.6
LINCR-0001-203ENST00000524047 RNF38Q9H0F5 515 aa5.04□□□□□ -1.6
LINCR-0001-203ENST00000524047 CGGBP1Q9UFW8 167 aaPredicted RBP5.04□□□□□ -1.6
LINCR-0001-203ENST00000524047 ATAD2BQ9ULI0 1458 aa5.03□□□□□ -1.6
LINCR-0001-203ENST00000524047 ANKRD34BA5PLL1 514 aa5.03□□□□□ -1.6
LINCR-0001-203ENST00000524047 DNAJA1P31689 397 aaKnown RBP5.03□□□□□ -1.6
LINCR-0001-203ENST00000524047 L1CAMP32004 1257 aa5.03□□□□□ -1.6
LINCR-0001-203ENST00000524047 LIMS1P48059 325 aa5.03□□□□□ -1.6
LINCR-0001-203ENST00000524047 KCNC1P48547 511 aa5.03□□□□□ -1.6
LINCR-0001-203ENST00000524047 SLURP1P55000 103 aa5.03□□□□□ -1.6
LINCR-0001-203ENST00000524047 KRTAP10-2P60368 255 aa5.03□□□□□ -1.6
LINCR-0001-203ENST00000524047 VWA3BQ502W6 1294 aa5.03□□□□□ -1.6
LINCR-0001-203ENST00000524047 BICRALQ6AI39 1079 aa5.03□□□□□ -1.6
LINCR-0001-203ENST00000524047 PRRT2Q7Z6L0 340 aaPredicted RBP5.03□□□□□ -1.6
LINCR-0001-203ENST00000524047 ACTR10Q9NZ32 417 aa5.03□□□□□ -1.6
LINCR-0001-203ENST00000524047 APEX2Q9UBZ4 518 aa5.03□□□□□ -1.6
LINCR-0001-203ENST00000524047 SUSD2Q9UGT4 822 aa5.03□□□□□ -1.6
LINCR-0001-203ENST00000524047 HCFC2Q9Y5Z7 792 aa5.03□□□□□ -1.6
LINCR-0001-203ENST00000524047 HMGXB3Q12766 1538 aa5.02□□□□□ -1.61
LINCR-0001-203ENST00000524047 BAZ1BQ9UIG0 1483 aaKnown RBP5.02□□□□□ -1.61
LINCR-0001-203ENST00000524047 E9PSI1 815 aa5.02□□□□□ -1.61
LINCR-0001-203ENST00000524047 NCAM1P13591 858 aa5.02□□□□□ -1.61
LINCR-0001-203ENST00000524047 ATF2P15336 505 aa5.02□□□□□ -1.61
LINCR-0001-203ENST00000524047 SEPHS1P49903 392 aa5.02□□□□□ -1.61
LINCR-0001-203ENST00000524047 HTRA3P83110 453 aa5.02□□□□□ -1.61
LINCR-0001-203ENST00000524047 PRR5P85299 388 aa5.02□□□□□ -1.61
LINCR-0001-203ENST00000524047 FOXO4P98177 505 aa5.02□□□□□ -1.61
LINCR-0001-203ENST00000524047 NFKB2Q00653 900 aa5.02□□□□□ -1.61
LINCR-0001-203ENST00000524047 AMPD2Q01433 879 aa5.02□□□□□ -1.61
LINCR-0001-203ENST00000524047 ARID5AQ03989 594 aa5.02□□□□□ -1.61
LINCR-0001-203ENST00000524047 NCAPHQ15003 741 aa5.02□□□□□ -1.61
LINCR-0001-203ENST00000524047 TNNI3KQ59H18 835 aa5.02□□□□□ -1.61
LINCR-0001-203ENST00000524047 ZFYVE27Q5T4F4 411 aa5.02□□□□□ -1.61
LINCR-0001-203ENST00000524047 RCSD1Q6JBY9 416 aa5.02□□□□□ -1.61
LINCR-0001-203ENST00000524047 C6orf15Q6UXA7 325 aaPredicted RBP5.02□□□□□ -1.61
LINCR-0001-203ENST00000524047 SAPCD2Q86UD0 394 aa5.02□□□□□ -1.61
LINCR-0001-203ENST00000524047 FNIP1Q8TF40 1166 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms