RNA–Protein interactions for RNA: ENST00000523842.1

EFCAB13-212, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-212ENST00000523842 SMAD4Q13485 552 aaKnown RBP4.75□□□□□ -1.65
EFCAB13-212ENST00000523842 TARBP2Q15633 366 aaKnown RBP4.75□□□□□ -1.65
EFCAB13-212ENST00000523842 GNPTABQ3T906 1256 aa4.75□□□□□ -1.65
EFCAB13-212ENST00000523842 CYP2R1Q6VVX0 501 aa4.75□□□□□ -1.65
EFCAB13-212ENST00000523842 SAPCD2Q86UD0 394 aa4.75□□□□□ -1.65
EFCAB13-212ENST00000523842 STK32CQ86UX6 486 aa4.75□□□□□ -1.65
EFCAB13-212ENST00000523842 TAB3Q8N5C8 712 aaPredicted RBP4.75□□□□□ -1.65
EFCAB13-212ENST00000523842 SMARCC2Q8TAQ2 1214 aa4.75□□□□□ -1.65
EFCAB13-212ENST00000523842 SPATA6Q9NWH7 488 aaPredicted RBP4.75□□□□□ -1.65
EFCAB13-212ENST00000523842 SF3B6Q9Y3B4 125 aaKnown RBP4.75□□□□□ -1.65
EFCAB13-212ENST00000523842 AURKAO14965 403 aa4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 TBC1D8O95759 1140 aa4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 ADRB1P08588 477 aa4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 CNR2P34972 360 aa4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 NOP2P46087 812 aaKnown RBP4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 POU4F1Q01851 419 aa4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 EFEMP1Q12805 493 aa4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 PAK2Q13177 524 aa4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 MBLAC2Q68D91 279 aa4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 HHIPL2Q6UWX4 724 aa4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 DBX2Q6ZNG2 339 aa4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 ADAT2Q7Z6V5 191 aaKnown RBP4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 RBBP8NLQ8NC74 664 aaPredicted RBP4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 KLHL6Q8WZ60 621 aa4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 SMARCC1Q92922 1105 aaPredicted RBP4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 DDX11Q96FC9 970 aa4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 MTA3Q9BTC8 594 aa4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 KLHL25Q9H0H3 589 aa4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 USP40Q9NVE5 1235 aa4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 DDX41Q9UJV9 622 aaKnown RBP4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 EFR3BQ9Y2G0 817 aa4.74□□□□□ -1.65
EFCAB13-212ENST00000523842 A0A1W2PQH9 124 aa4.73□□□□□ -1.65
EFCAB13-212ENST00000523842 NOBOXO60393 691 aa4.73□□□□□ -1.65
EFCAB13-212ENST00000523842 IMPDH2P12268 514 aa4.73□□□□□ -1.65
EFCAB13-212ENST00000523842 NCAM1P13591 858 aa4.73□□□□□ -1.65
EFCAB13-212ENST00000523842 PUM1Q14671 1186 aaKnown RBP eCLIP4.73□□□□□ -1.65
EFCAB13-212ENST00000523842 TCEAL1Q15170 157 aa4.73□□□□□ -1.65
EFCAB13-212ENST00000523842 UBXN11Q5T124 520 aa4.73□□□□□ -1.65
EFCAB13-212ENST00000523842 C9orf131Q5VYM1 1079 aa4.73□□□□□ -1.65
EFCAB13-212ENST00000523842 B3GNT8Q7Z7M8 397 aa4.73□□□□□ -1.65
EFCAB13-212ENST00000523842 FAM26EQ8N5C1 309 aa4.73□□□□□ -1.65
EFCAB13-212ENST00000523842 GPRC5CQ9NQ84 441 aa4.73□□□□□ -1.65
EFCAB13-212ENST00000523842 APEX2Q9UBZ4 518 aa4.73□□□□□ -1.65
EFCAB13-212ENST00000523842 CGGBP1Q9UFW8 167 aaPredicted RBP4.73□□□□□ -1.65
EFCAB13-212ENST00000523842 SH3D21A4FU49 640 aa4.72□□□□□ -1.65
EFCAB13-212ENST00000523842 C2orf71A6NGG8 1288 aa4.72□□□□□ -1.65
EFCAB13-212ENST00000523842 FUCA1P04066 466 aa4.72□□□□□ -1.65
EFCAB13-212ENST00000523842 NTRK1P04629 796 aa4.72□□□□□ -1.65
EFCAB13-212ENST00000523842 ITGAEP38570 1179 aa4.72□□□□□ -1.65
EFCAB13-212ENST00000523842 HEATR6Q6AI08 1181 aaKnown RBP4.72□□□□□ -1.65
EFCAB13-212ENST00000523842 RCSD1Q6JBY9 416 aa4.72□□□□□ -1.65
EFCAB13-212ENST00000523842 CARFQ8N187 725 aa4.72□□□□□ -1.65
EFCAB13-212ENST00000523842 NLGN1Q8N2Q7 840 aa4.72□□□□□ -1.65
EFCAB13-212ENST00000523842 LZTR1Q8N653 840 aa4.72□□□□□ -1.65
EFCAB13-212ENST00000523842 NLGN2Q8NFZ4 835 aa4.72□□□□□ -1.65
EFCAB13-212ENST00000523842 DPF3Q92784 378 aa4.72□□□□□ -1.65
EFCAB13-212ENST00000523842 ZBTB8AQ96BR9 441 aa4.72□□□□□ -1.65
EFCAB13-212ENST00000523842 CLEC1BQ9P126 229 aa4.72□□□□□ -1.65
EFCAB13-212ENST00000523842 WHRNQ9P202 907 aa4.72□□□□□ -1.65
EFCAB13-212ENST00000523842 DIS3Q9Y2L1 958 aaKnown RBP4.72□□□□□ -1.65
EFCAB13-212ENST00000523842 C7orf72A4D263 438 aa4.71□□□□□ -1.66
EFCAB13-212ENST00000523842 C8BP07358 591 aa4.71□□□□□ -1.66
EFCAB13-212ENST00000523842 PPP2R5EQ16537 467 aa4.71□□□□□ -1.66
EFCAB13-212ENST00000523842 ZNF513Q8N8E2 541 aaPredicted RBP4.71□□□□□ -1.66
EFCAB13-212ENST00000523842 GORASP1Q9BQQ3 440 aa4.71□□□□□ -1.66
EFCAB13-212ENST00000523842 BTG4Q9NY30 223 aa4.71□□□□□ -1.66
EFCAB13-212ENST00000523842 A0A087WZG4 1122 aa4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 RECKO95980 971 aa4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 SEPHS1P49903 392 aa4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 EIF6P56537 245 aaKnown RBP4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 CORO7P57737 925 aa4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 CAP1Q01518 475 aa4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 SLC7A5Q01650 507 aa4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 INF2Q27J81 1249 aa4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 ZXDCQ2QGD7 858 aaPredicted RBP4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 SPATS1Q496A3 300 aa4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 ZFYVE27Q5T4F4 411 aa4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 EEF1DP3Q658K8 133 aa4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 METTL16Q86W50 562 aaKnown RBP4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 ZNF761Q86XN6 746 aaPredicted RBP4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 ARHGEF39Q8N4T4 335 aa4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 FAM169BQ8N8A8 192 aa4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 USP33Q8TEY7 942 aa4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 RNF34Q969K3 372 aa4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 TSPAN17Q96FV3 270 aa4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 LNPKQ9C0E8 428 aa4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 RNF38Q9H0F5 515 aa4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 TMPRSS5Q9H3S3 457 aa4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 BACE2Q9Y5Z0 518 aa4.7□□□□□ -1.66
EFCAB13-212ENST00000523842 NPHP3-ACAD11A0A0J9YXS1 232 aa4.69□□□□□ -1.66
EFCAB13-212ENST00000523842 K7ESM1 405 aa4.69□□□□□ -1.66
EFCAB13-212ENST00000523842 ARNTLO00327 626 aa4.69□□□□□ -1.66
EFCAB13-212ENST00000523842 KCNH1O95259 989 aa4.69□□□□□ -1.66
EFCAB13-212ENST00000523842 PLS3P13797 630 aa4.69□□□□□ -1.66
EFCAB13-212ENST00000523842 GIPRP48546 466 aa4.69□□□□□ -1.66
EFCAB13-212ENST00000523842 AMPD2Q01433 879 aa4.69□□□□□ -1.66
EFCAB13-212ENST00000523842 CACNB2Q08289 660 aaPredicted RBP4.69□□□□□ -1.66
EFCAB13-212ENST00000523842 CYP4F3Q08477 520 aa4.69□□□□□ -1.66
EFCAB13-212ENST00000523842 WWC2Q6AWC2 1192 aa4.69□□□□□ -1.66
EFCAB13-212ENST00000523842 KIAA1211LQ6NV74 962 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms