RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 HSP90AA2PQ14568 343 aaPredicted RBP7.01□□□□□ -1.29
PCM1-219ENST00000523540 SF1Q15637 639 aaKnown RBP7.01□□□□□ -1.29
PCM1-219ENST00000523540 EEF1DP3Q658K8 133 aa7.01□□□□□ -1.29
PCM1-219ENST00000523540 IRF2BP1Q8IU81 584 aa7.01□□□□□ -1.29
PCM1-219ENST00000523540 ABHD4Q8TB40 342 aa7.01□□□□□ -1.29
PCM1-219ENST00000523540 BACE2Q9Y5Z0 518 aa7.01□□□□□ -1.29
PCM1-219ENST00000523540 TRBV23OR9-2A0A075B6M9 112 aa7□□□□□ -1.29
PCM1-219ENST00000523540 FADS2P1A8MWK0 482 aa7□□□□□ -1.29
PCM1-219ENST00000523540 NPIPB6E9PJ23 425 aa7□□□□□ -1.29
PCM1-219ENST00000523540 HRKO00198 91 aa7□□□□□ -1.29
PCM1-219ENST00000523540 FAM153BP0C7A2 387 aa7□□□□□ -1.29
PCM1-219ENST00000523540 HK2P52789 917 aa7□□□□□ -1.29
PCM1-219ENST00000523540 GFRA1P56159 465 aa7□□□□□ -1.29
PCM1-219ENST00000523540 SCRN1Q12765 414 aa7□□□□□ -1.29
PCM1-219ENST00000523540 SLCO6A1Q86UG4 719 aa7□□□□□ -1.29
PCM1-219ENST00000523540 ZBTB38Q8NAP3 1195 aaPredicted RBP7□□□□□ -1.29
PCM1-219ENST00000523540 HHIPL1Q96JK4 782 aa7□□□□□ -1.29
PCM1-219ENST00000523540 CCDC140Q96MF4 163 aa7□□□□□ -1.29
PCM1-219ENST00000523540 PTCHD1Q96NR3 888 aa7□□□□□ -1.29
PCM1-219ENST00000523540 AARSD1Q9BTE6 412 aaKnown RBP7□□□□□ -1.29
PCM1-219ENST00000523540 WTIPA6NIX2 430 aaPredicted RBP6.99□□□□□ -1.29
PCM1-219ENST00000523540 INHBBP09529 407 aa6.99□□□□□ -1.29
PCM1-219ENST00000523540 FGFR1P11362 822 aa6.99□□□□□ -1.29
PCM1-219ENST00000523540 LONRF2Q1L5Z9 754 aa6.99□□□□□ -1.29
PCM1-219ENST00000523540 YOD1Q5VVQ6 348 aaPredicted RBP6.99□□□□□ -1.29
PCM1-219ENST00000523540 GALNT18Q6P9A2 607 aa6.99□□□□□ -1.29
PCM1-219ENST00000523540 SLC6A17Q9H1V8 727 aa6.99□□□□□ -1.29
PCM1-219ENST00000523540 NSUN3Q9H649 340 aaKnown RBP6.99□□□□□ -1.29
PCM1-219ENST00000523540 GPRC5CQ9NQ84 441 aa6.99□□□□□ -1.29
PCM1-219ENST00000523540 TRAV20A0A0B4J274 112 aa6.98□□□□□ -1.29
PCM1-219ENST00000523540 NOTOA8MTQ0 251 aa6.98□□□□□ -1.29
PCM1-219ENST00000523540 THBDP07204 575 aa6.98□□□□□ -1.29
PCM1-219ENST00000523540 SNRPB2P08579 225 aaKnown RBP6.98□□□□□ -1.29
PCM1-219ENST00000523540 SEPHS1P49903 392 aa6.98□□□□□ -1.29
PCM1-219ENST00000523540 ERVFC1P60507 584 aa6.98□□□□□ -1.29
PCM1-219ENST00000523540 KCNA10Q16322 511 aa6.98□□□□□ -1.29
PCM1-219ENST00000523540 FOXB2Q5VYV0 432 aa6.98□□□□□ -1.29
PCM1-219ENST00000523540 HLA-DQA1Q5Y7H0 255 aa6.98□□□□□ -1.29
PCM1-219ENST00000523540 NOP9Q86U38 636 aaKnown RBP6.98□□□□□ -1.29
PCM1-219ENST00000523540 NLRX1Q86UT6 975 aa6.98□□□□□ -1.29
PCM1-219ENST00000523540 KREMEN2Q8NCW0 462 aa6.98□□□□□ -1.29
PCM1-219ENST00000523540 NLGN2Q8NFZ4 835 aa6.98□□□□□ -1.29
PCM1-219ENST00000523540 NPLOC4Q8TAT6 608 aa6.98□□□□□ -1.29
PCM1-219ENST00000523540 FRS2Q8WU20 508 aa6.98□□□□□ -1.29
PCM1-219ENST00000523540 OSBP2Q969R2 916 aa6.98□□□□□ -1.29
PCM1-219ENST00000523540 SHISA4Q96DD7 197 aa6.98□□□□□ -1.29
PCM1-219ENST00000523540 C1orf159Q96HA4 380 aa6.98□□□□□ -1.29
PCM1-219ENST00000523540 DIRC2Q96SL1 478 aa6.98□□□□□ -1.29
PCM1-219ENST00000523540 IER2Q9BTL4 223 aa6.98□□□□□ -1.29
PCM1-219ENST00000523540 YBX2Q9Y2T7 364 aaKnown RBP6.98□□□□□ -1.29
PCM1-219ENST00000523540 ARNTLO00327 626 aa6.97□□□□□ -1.29
PCM1-219ENST00000523540 PRODHO43272 600 aa6.97□□□□□ -1.29
PCM1-219ENST00000523540 DLX3O60479 287 aa6.97□□□□□ -1.29
PCM1-219ENST00000523540 USP2O75604 605 aaPredicted RBP6.97□□□□□ -1.29
PCM1-219ENST00000523540 CPP00450 1065 aa6.97□□□□□ -1.29
PCM1-219ENST00000523540 PABPC1P11940 636 aaKnown RBP6.97□□□□□ -1.29
PCM1-219ENST00000523540 TESK1Q15569 626 aa6.97□□□□□ -1.29
PCM1-219ENST00000523540 PRSS53Q2L4Q9 553 aa6.97□□□□□ -1.29
PCM1-219ENST00000523540 C2orf27AQ580R0 203 aa6.97□□□□□ -1.29
PCM1-219ENST00000523540 SLC35F1Q5T1Q4 408 aa6.97□□□□□ -1.29
PCM1-219ENST00000523540 DENND5AQ6IQ26 1287 aa6.97□□□□□ -1.29
PCM1-219ENST00000523540 TMEM145Q8NBT3 493 aa6.97□□□□□ -1.29
PCM1-219ENST00000523540 THAP3Q8WTV1 239 aaPredicted RBP6.97□□□□□ -1.29
PCM1-219ENST00000523540 C20orf173Q96LM9 149 aa6.97□□□□□ -1.29
PCM1-219ENST00000523540 KANSL2Q9H9L4 492 aa6.97□□□□□ -1.29
PCM1-219ENST00000523540 ACSL6Q9UKU0 697 aa6.97□□□□□ -1.29
PCM1-219ENST00000523540 TBC1D8O95759 1140 aa6.96□□□□□ -1.3
PCM1-219ENST00000523540 TMEM253P0C7T8 217 aa6.96□□□□□ -1.3
PCM1-219ENST00000523540 PLS3P13797 630 aa6.96□□□□□ -1.3
PCM1-219ENST00000523540 GLDCP23378 1020 aa6.96□□□□□ -1.3
PCM1-219ENST00000523540 ECI1P42126 302 aa6.96□□□□□ -1.3
PCM1-219ENST00000523540 KCNJ6P48051 423 aa6.96□□□□□ -1.3
PCM1-219ENST00000523540 MAP4K2Q12851 820 aa6.96□□□□□ -1.3
PCM1-219ENST00000523540 LAPTM5Q13571 262 aa6.96□□□□□ -1.3
PCM1-219ENST00000523540 NSMFQ6X4W1 530 aa6.96□□□□□ -1.3
PCM1-219ENST00000523540 ATG14Q6ZNE5 492 aa6.96□□□□□ -1.3
PCM1-219ENST00000523540 NAT16Q8N8M0 369 aa6.96□□□□□ -1.3
PCM1-219ENST00000523540 RNPC3Q96LT9 517 aaKnown RBP6.96□□□□□ -1.3
PCM1-219ENST00000523540 KCNK12Q9HB15 430 aa6.96□□□□□ -1.3
PCM1-219ENST00000523540 CLEC1BQ9P126 229 aa6.96□□□□□ -1.3
PCM1-219ENST00000523540 EFEMP2O95967 443 aa6.95□□□□□ -1.3
PCM1-219ENST00000523540 PNLIPP16233 465 aa6.95□□□□□ -1.3
PCM1-219ENST00000523540 CTSWP56202 376 aa6.95□□□□□ -1.3
PCM1-219ENST00000523540 RTP1P59025 263 aa6.95□□□□□ -1.3
PCM1-219ENST00000523540 ERVFRD-1P60508 538 aa6.95□□□□□ -1.3
PCM1-219ENST00000523540 HSF5Q4G112 596 aaPredicted RBP6.95□□□□□ -1.3
PCM1-219ENST00000523540 TIGD5Q53EQ6 642 aa6.95□□□□□ -1.3
PCM1-219ENST00000523540 ZC3H12BQ5HYM0 836 aaKnown RBP6.95□□□□□ -1.3
PCM1-219ENST00000523540 FAM209AQ5JX71 171 aa6.95□□□□□ -1.3
PCM1-219ENST00000523540 GIMAP6Q6P9H5 292 aa6.95□□□□□ -1.3
PCM1-219ENST00000523540 CEP128Q6ZU80 1094 aa6.95□□□□□ -1.3
PCM1-219ENST00000523540 SCUBE1Q8IWY4 988 aa6.95□□□□□ -1.3
PCM1-219ENST00000523540 SH3TC2Q8TF17 1288 aa6.95□□□□□ -1.3
PCM1-219ENST00000523540 KCTD13Q8WZ19 329 aa6.95□□□□□ -1.3
PCM1-219ENST00000523540 EXOC2Q96KP1 924 aa6.95□□□□□ -1.3
PCM1-219ENST00000523540 JMJD8Q96S16 334 aa6.95□□□□□ -1.3
PCM1-219ENST00000523540 MMP19Q99542 508 aa6.95□□□□□ -1.3
PCM1-219ENST00000523540 RNF32Q9H0A6 362 aa6.95□□□□□ -1.3
PCM1-219ENST00000523540 TMEFF2Q9UIK5 374 aaPredicted RBP6.95□□□□□ -1.3
PCM1-219ENST00000523540 JAG2Q9Y219 1238 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms