RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 NEK8Q86SG6 692 aa10.65□□□□□ -0.71
SDCBP-212ENST00000523483 CLIC6Q96NY7 704 aa10.65□□□□□ -0.71
SDCBP-212ENST00000523483 PTPN18Q99952 460 aa10.65□□□□□ -0.71
SDCBP-212ENST00000523483 PANK2Q9BZ23 570 aa10.65□□□□□ -0.71
SDCBP-212ENST00000523483 TCHHQ07283 1943 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 OPLAHO14841 1288 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 PLA2G6O60733 806 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 TDP2O95551 362 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 BAATQ14032 418 aaPredicted RBP10.64□□□□□ -0.71
SDCBP-212ENST00000523483 GPAT2Q6NUI2 795 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 PPP1R18Q6NYC8 613 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 RASSF8Q8NHQ8 419 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 GJA10Q969M2 543 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 SPATC1LQ9H0A9 340 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 RTEL1Q9NZ71 1219 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 CPA4Q9UI42 421 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 ABCB11O95342 1321 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 PAPPA2Q9BXP8 1791 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 AOC2O75106 756 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 PTGDRQ13258 359 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 SLC30A10Q6XR72 485 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 TLL2Q9Y6L7 1015 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 ESYT2A0FGR8 921 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 VWA3AA6NCI4 1184 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 ERCC3P19447 782 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 HOXA7P31268 230 aaPredicted RBP10.64□□□□□ -0.71
SDCBP-212ENST00000523483 Q3C1V9 767 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 LBX2Q6XYB7 198 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 R3HDMLQ9H3Y0 253 aa10.64□□□□□ -0.71
SDCBP-212ENST00000523483 IGF2BP3O00425 579 aaKnown RBP eCLIP10.63□□□□□ -0.71
SDCBP-212ENST00000523483 TRAK2O60296 914 aa10.63□□□□□ -0.71
SDCBP-212ENST00000523483 MOGSQ13724 837 aa10.63□□□□□ -0.71
SDCBP-212ENST00000523483 DEFB115Q30KQ5 88 aa10.63□□□□□ -0.71
SDCBP-212ENST00000523483 PRR16Q569H4 304 aa10.63□□□□□ -0.71
SDCBP-212ENST00000523483 LINC00301Q8NCQ3 95 aa10.63□□□□□ -0.71
SDCBP-212ENST00000523483 TNFRSF25Q93038 417 aa10.63□□□□□ -0.71
SDCBP-212ENST00000523483 ACAD9Q9H845 621 aa10.63□□□□□ -0.71
SDCBP-212ENST00000523483 EFCC1Q9HA90 598 aa10.63□□□□□ -0.71
SDCBP-212ENST00000523483 LMBRD1Q9NUN5 540 aa10.63□□□□□ -0.71
SDCBP-212ENST00000523483 PGK2P07205 417 aa10.63□□□□□ -0.71
SDCBP-212ENST00000523483 CAVIN1Q6NZI2 390 aaKnown RBP10.63□□□□□ -0.71
SDCBP-212ENST00000523483 MCF2L2Q86YR7 1114 aa10.63□□□□□ -0.71
SDCBP-212ENST00000523483 PDILTQ8N807 584 aa10.63□□□□□ -0.71
SDCBP-212ENST00000523483 MOV10L1Q9BXT6 1211 aaKnown RBP10.63□□□□□ -0.71
SDCBP-212ENST00000523483 GLT8D2Q9H1C3 349 aa10.63□□□□□ -0.71
SDCBP-212ENST00000523483 RBPJLQ9UBG7 517 aa10.63□□□□□ -0.71
SDCBP-212ENST00000523483 CDC25AP30304 524 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 ARHGAP4P98171 946 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 DAGLBQ8NCG7 672 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 KCNG4Q8TDN1 519 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 CCDC102AQ96A19 550 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 RMDN3Q96TC7 470 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 PARK7Q99497 189 aaKnown RBP10.62□□□□□ -0.71
SDCBP-212ENST00000523483 POLR3EQ9NVU0 708 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 CEP131Q9UPN4 1083 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 A0A1B0GVL5 298 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 NEMFO60524 1076 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 FDX1P10109 184 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 TXKP42681 527 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 GRIN1Q05586 938 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 ARHGEF16Q5VV41 709 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 POTEEQ6S8J3 1075 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 EEPD1Q7L9B9 569 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 POTEDQ86YR6 584 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 JMYQ8N9B5 988 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 CYP2W1Q8TAV3 490 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 TAAR1Q96RJ0 339 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 PORCNQ9H237 461 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 COL20A1Q9P218 1284 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 PCDHA7Q9UN72 937 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 MANSC4A6NHS7 340 aaPredicted RBP10.62□□□□□ -0.71
SDCBP-212ENST00000523483 SORBS3O60504 671 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 ERVK-9P63128 1117 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 ERVK-24P63145 666 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 CLEC4DQ8WXI8 215 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 CAPNS2Q96L46 248 aa10.62□□□□□ -0.71
SDCBP-212ENST00000523483 A1CFQ9NQ94 594 aaKnown RBP10.62□□□□□ -0.71
SDCBP-212ENST00000523483 TESPA1A2RU30 521 aaPredicted RBP10.61□□□□□ -0.71
SDCBP-212ENST00000523483 UNCXA6NJT0 531 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 SLC10A3P09131 477 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 KCTD2Q14681 263 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 SLC39A14Q15043 492 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 TRMT1LQ7Z2T5 733 aaKnown RBP10.61□□□□□ -0.71
SDCBP-212ENST00000523483 MB21D1Q8N884 522 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 FSIP1Q8NA03 581 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 GPRC5AQ8NFJ5 357 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 TMEM60Q9H2L4 133 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 DDX25Q9UHL0 483 aaKnown RBP10.61□□□□□ -0.71
SDCBP-212ENST00000523483 IVNS1ABPQ9Y6Y0 642 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 M0R2N6 131 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 SLC37A4O43826 429 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 APLP1P51693 650 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 CNTN2Q02246 1040 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 FSTL1Q12841 308 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 REPS2Q8NFH8 660 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 SYTL5Q8TDW5 730 aaPredicted RBP10.61□□□□□ -0.71
SDCBP-212ENST00000523483 YEATS4O95619 227 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 UBE2HP62256 183 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 AP3B2Q13367 1082 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 CAMK4Q16566 473 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms