RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 ZNF865P0CJ78 1059 aaPredicted RBP12.2□□□□□ -0.46
DENND3-220ENST00000523066 PTGS1P23219 599 aa12.2□□□□□ -0.46
DENND3-220ENST00000523066 RPS6P62753 249 aaKnown RBP12.2□□□□□ -0.46
DENND3-220ENST00000523066 MAMDC4Q6UXC1 1216 aa12.2□□□□□ -0.46
DENND3-220ENST00000523066 RNF207Q6ZRF8 634 aa12.2□□□□□ -0.46
DENND3-220ENST00000523066 ARMCX2Q7L311 632 aa12.2□□□□□ -0.46
DENND3-220ENST00000523066 EEPD1Q7L9B9 569 aa12.2□□□□□ -0.46
DENND3-220ENST00000523066 BRF1Q92994 677 aa12.2□□□□□ -0.46
DENND3-220ENST00000523066 MAP3K14Q99558 947 aa12.2□□□□□ -0.46
DENND3-220ENST00000523066 UPF3BQ9BZI7 483 aaKnown RBP12.2□□□□□ -0.46
DENND3-220ENST00000523066 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.2□□□□□ -0.46
DENND3-220ENST00000523066 COL20A1Q9P218 1284 aa12.2□□□□□ -0.46
DENND3-220ENST00000523066 DDX20Q9UHI6 824 aaKnown RBP12.2□□□□□ -0.46
DENND3-220ENST00000523066 OGDHLQ9ULD0 1010 aa12.2□□□□□ -0.46
DENND3-220ENST00000523066 NAP1L2Q9ULW6 460 aaPredicted RBP12.2□□□□□ -0.46
DENND3-220ENST00000523066 PFASO15067 1338 aa12.19□□□□□ -0.46
DENND3-220ENST00000523066 ABCB11O95342 1321 aa12.19□□□□□ -0.46
DENND3-220ENST00000523066 ADCY6O43306 1168 aa12.19□□□□□ -0.46
DENND3-220ENST00000523066 EPB41L2O43491 1005 aaKnown RBP12.19□□□□□ -0.46
DENND3-220ENST00000523066 FARP2O94887 1054 aaPredicted RBP12.19□□□□□ -0.46
DENND3-220ENST00000523066 HMGB1P09429 215 aaKnown RBP12.19□□□□□ -0.46
DENND3-220ENST00000523066 CDC27P30260 824 aa12.19□□□□□ -0.46
DENND3-220ENST00000523066 IRX5P78411 483 aaPredicted RBP12.19□□□□□ -0.46
DENND3-220ENST00000523066 C8orf34Q49A92 452 aa12.19□□□□□ -0.46
DENND3-220ENST00000523066 TMEM63BQ5T3F8 832 aa12.19□□□□□ -0.46
DENND3-220ENST00000523066 UBE2Q1Q7Z7E8 422 aa12.19□□□□□ -0.46
DENND3-220ENST00000523066 ZNF467Q7Z7K2 595 aaPredicted RBP12.19□□□□□ -0.46
DENND3-220ENST00000523066 PIP4P2Q8N4L2 257 aa12.19□□□□□ -0.46
DENND3-220ENST00000523066 FANCBQ8NB91 859 aa12.19□□□□□ -0.46
DENND3-220ENST00000523066 PAWRQ96IZ0 340 aaKnown RBP12.19□□□□□ -0.46
DENND3-220ENST00000523066 AMNQ9BXJ7 453 aa12.19□□□□□ -0.46
DENND3-220ENST00000523066 KATNBL1Q9H079 304 aa12.19□□□□□ -0.46
DENND3-220ENST00000523066 ZSWIM6Q9HCJ5 1215 aa12.19□□□□□ -0.46
DENND3-220ENST00000523066 FAM217BQ9NTX9 383 aaPredicted RBP12.19□□□□□ -0.46
DENND3-220ENST00000523066 ZHX1Q9UKY1 873 aaPredicted RBP12.19□□□□□ -0.46
DENND3-220ENST00000523066 SYNGAP1Q96PV0 1343 aa12.18□□□□□ -0.46
DENND3-220ENST00000523066 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.18□□□□□ -0.46
DENND3-220ENST00000523066 PNMA6FA0A0J9YX94 578 aa12.18□□□□□ -0.46
DENND3-220ENST00000523066 SEPT4O43236 478 aa12.18□□□□□ -0.46
DENND3-220ENST00000523066 ZBTB43O43298 467 aa12.18□□□□□ -0.46
DENND3-220ENST00000523066 CFBP00751 764 aa12.18□□□□□ -0.46
DENND3-220ENST00000523066 CALM1P0DP23 149 aa12.18□□□□□ -0.46
DENND3-220ENST00000523066 CALM2P0DP24 149 aa12.18□□□□□ -0.46
DENND3-220ENST00000523066 CALM3P0DP25 149 aa12.18□□□□□ -0.46
DENND3-220ENST00000523066 KIF5BP33176 963 aa12.18□□□□□ -0.46
DENND3-220ENST00000523066 ALDH5A1P51649 535 aaPredicted RBP12.18□□□□□ -0.46
DENND3-220ENST00000523066 FGD1P98174 961 aa12.18□□□□□ -0.46
DENND3-220ENST00000523066 ACVR2BQ13705 512 aa12.18□□□□□ -0.46
DENND3-220ENST00000523066 TOB2Q14106 344 aaPredicted RBP12.18□□□□□ -0.46
DENND3-220ENST00000523066 SYNE3Q6ZMZ3 975 aa12.18□□□□□ -0.46
DENND3-220ENST00000523066 TMTC3Q6ZXV5 915 aa12.18□□□□□ -0.46
DENND3-220ENST00000523066 RUFY3Q7L099 469 aa12.18□□□□□ -0.46
DENND3-220ENST00000523066 FBXO16Q8IX29 292 aaPredicted RBP12.18□□□□□ -0.46
DENND3-220ENST00000523066 ZFP91Q96JP5 570 aaPredicted RBP12.18□□□□□ -0.46
DENND3-220ENST00000523066 TAAR1Q96RJ0 339 aa12.18□□□□□ -0.46
DENND3-220ENST00000523066 SPZ1Q9BXG8 430 aa12.18□□□□□ -0.46
DENND3-220ENST00000523066 PDGFCQ9NRA1 345 aa12.18□□□□□ -0.46
DENND3-220ENST00000523066 CNPY2Q9Y2B0 182 aa12.18□□□□□ -0.46
DENND3-220ENST00000523066 PCDHA1Q9Y5I3 950 aa12.18□□□□□ -0.46
DENND3-220ENST00000523066 CNTNAP5Q8WYK1 1306 aa12.17□□□□□ -0.46
DENND3-220ENST00000523066 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.17□□□□□ -0.46
DENND3-220ENST00000523066 GOLGA8AA7E2F4 631 aa12.17□□□□□ -0.46
DENND3-220ENST00000523066 GOLGA8BA8MQT2 603 aa12.17□□□□□ -0.46
DENND3-220ENST00000523066 PPFIA3O75145 1194 aa12.17□□□□□ -0.46
DENND3-220ENST00000523066 PSMA5P28066 241 aa12.17□□□□□ -0.46
DENND3-220ENST00000523066 HOXA13P31271 388 aaPredicted RBP12.17□□□□□ -0.46
DENND3-220ENST00000523066 ADD1P35611 737 aaKnown RBP12.17□□□□□ -0.46
DENND3-220ENST00000523066 RTN1Q16799 776 aa12.17□□□□□ -0.46
DENND3-220ENST00000523066 GJC2Q5T442 439 aaPredicted RBP12.17□□□□□ -0.46
DENND3-220ENST00000523066 MSL3Q8N5Y2 521 aaKnown RBP12.17□□□□□ -0.46
DENND3-220ENST00000523066 SYTL5Q8TDW5 730 aaPredicted RBP12.17□□□□□ -0.46
DENND3-220ENST00000523066 AGXT2Q9BYV1 514 aa12.17□□□□□ -0.46
DENND3-220ENST00000523066 PCDH10Q9P2E7 1040 aa12.17□□□□□ -0.46
DENND3-220ENST00000523066 MRPL11Q9Y3B7 192 aaKnown RBP12.17□□□□□ -0.46
DENND3-220ENST00000523066 GTF3C3Q9Y5Q9 886 aa12.17□□□□□ -0.46
DENND3-220ENST00000523066 KIAA1217Q5T5P2 1943 aa12.17□□□□□ -0.46
DENND3-220ENST00000523066 ASB14A6NK59 587 aa12.16□□□□□ -0.46
DENND3-220ENST00000523066 DTNBO60941 627 aa12.16□□□□□ -0.46
DENND3-220ENST00000523066 PGK1P00558 417 aa12.16□□□□□ -0.46
DENND3-220ENST00000523066 ADCYAP1R1P41586 468 aa12.16□□□□□ -0.46
DENND3-220ENST00000523066 CCT2P78371 535 aaKnown RBP12.16□□□□□ -0.46
DENND3-220ENST00000523066 FUT2Q10981 343 aa12.16□□□□□ -0.46
DENND3-220ENST00000523066 CCDC144BQ3MJ40 725 aa12.16□□□□□ -0.46
DENND3-220ENST00000523066 GPKOWQ92917 476 aaPredicted RBP eCLIP12.16□□□□□ -0.46
DENND3-220ENST00000523066 RRP36Q96EU6 259 aaKnown RBP12.16□□□□□ -0.46
DENND3-220ENST00000523066 ABHD16BQ9H3Z7 469 aa12.16□□□□□ -0.46
DENND3-220ENST00000523066 PNMA2Q9UL42 364 aa12.16□□□□□ -0.46
DENND3-220ENST00000523066 CYP46A1Q9Y6A2 500 aa12.16□□□□□ -0.46
DENND3-220ENST00000523066 MKI67P46013 3256 aaKnown RBP12.16□□□□□ -0.46
DENND3-220ENST00000523066 MYADML2A6NDP7 307 aa12.15□□□□□ -0.46
DENND3-220ENST00000523066 TNRC18O15417 2968 aaPredicted RBP12.15□□□□□ -0.46
DENND3-220ENST00000523066 AKR1A1P14550 325 aa12.15□□□□□ -0.46
DENND3-220ENST00000523066 SMARCA1P28370 1054 aa12.15□□□□□ -0.46
DENND3-220ENST00000523066 GNAQP50148 359 aa12.15□□□□□ -0.46
DENND3-220ENST00000523066 METAP2P50579 478 aaKnown RBP eCLIP12.15□□□□□ -0.46
DENND3-220ENST00000523066 HSD17B4P51659 736 aa12.15□□□□□ -0.46
DENND3-220ENST00000523066 TAPT1Q6NXT6 567 aa12.15□□□□□ -0.46
DENND3-220ENST00000523066 RGS22Q8NE09 1264 aa12.15□□□□□ -0.46
DENND3-220ENST00000523066 MORC4Q8TE76 937 aa12.15□□□□□ -0.46
DENND3-220ENST00000523066 LZTS2Q9BRK4 669 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms