RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 FGBP02675 491 aa11.08□□□□□ -0.64
SDC2-207ENST00000522911 CYP2C18P33260 490 aa11.08□□□□□ -0.64
SDC2-207ENST00000522911 CPT1AP50416 773 aa11.08□□□□□ -0.64
SDC2-207ENST00000522911 ALDH5A1P51649 535 aaPredicted RBP11.08□□□□□ -0.64
SDC2-207ENST00000522911 CTDSPL2Q05D32 466 aa11.08□□□□□ -0.64
SDC2-207ENST00000522911 MCMDC2Q4G0Z9 681 aa11.08□□□□□ -0.64
SDC2-207ENST00000522911 VPS53Q5VIR6 699 aa11.08□□□□□ -0.64
SDC2-207ENST00000522911 SYDE2Q5VT97 1194 aa11.08□□□□□ -0.64
SDC2-207ENST00000522911 FBXO16Q8IX29 292 aaPredicted RBP11.08□□□□□ -0.64
SDC2-207ENST00000522911 RPUSD2Q8IZ73 545 aaKnown RBP11.08□□□□□ -0.64
SDC2-207ENST00000522911 TMEM47Q9BQJ4 181 aa11.08□□□□□ -0.64
SDC2-207ENST00000522911 PPP1R12CQ9BZL4 782 aa11.08□□□□□ -0.64
SDC2-207ENST00000522911 ALDH8A1Q9H2A2 487 aaPredicted RBP11.08□□□□□ -0.64
SDC2-207ENST00000522911 PRDM6Q9NQX0 595 aa11.08□□□□□ -0.64
SDC2-207ENST00000522911 PDGFCQ9NRA1 345 aa11.08□□□□□ -0.64
SDC2-207ENST00000522911 MSRAQ9UJ68 235 aa11.08□□□□□ -0.64
SDC2-207ENST00000522911 LCTP09848 1927 aa11.07□□□□□ -0.64
SDC2-207ENST00000522911 A6NJR5 290 aa11.07□□□□□ -0.64
SDC2-207ENST00000522911 PITPNM1O00562 1244 aa11.07□□□□□ -0.64
SDC2-207ENST00000522911 HSPD1P10809 573 aaKnown RBP11.07□□□□□ -0.64
SDC2-207ENST00000522911 PDHBP11177 359 aa11.07□□□□□ -0.64
SDC2-207ENST00000522911 POU3F3P20264 500 aaPredicted RBP11.07□□□□□ -0.64
SDC2-207ENST00000522911 PBX2P40425 430 aa11.07□□□□□ -0.64
SDC2-207ENST00000522911 PURAQ00577 322 aaKnown RBP11.07□□□□□ -0.64
SDC2-207ENST00000522911 PTPN11Q06124 597 aaPredicted RBP11.07□□□□□ -0.64
SDC2-207ENST00000522911 BAATQ14032 418 aaPredicted RBP11.07□□□□□ -0.64
SDC2-207ENST00000522911 GPATCH4Q5T3I0 446 aaKnown RBP11.07□□□□□ -0.64
SDC2-207ENST00000522911 NFRKBQ6P4R8 1299 aa11.07□□□□□ -0.64
SDC2-207ENST00000522911 NSMFQ6X4W1 530 aa11.07□□□□□ -0.64
SDC2-207ENST00000522911 KIAA1211Q6ZU35 1233 aa11.07□□□□□ -0.64
SDC2-207ENST00000522911 NOL8Q76FK4 1167 aaKnown RBP11.07□□□□□ -0.64
SDC2-207ENST00000522911 USP38Q8NB14 1042 aa11.07□□□□□ -0.64
SDC2-207ENST00000522911 CLEC4DQ8WXI8 215 aa11.07□□□□□ -0.64
SDC2-207ENST00000522911 MPHOSPH6Q99547 160 aaKnown RBP11.07□□□□□ -0.64
SDC2-207ENST00000522911 WDR11Q9BZH6 1224 aa11.07□□□□□ -0.64
SDC2-207ENST00000522911 WNT8AQ9H1J5 351 aa11.07□□□□□ -0.64
SDC2-207ENST00000522911 CXXC1Q9P0U4 656 aaPredicted RBP11.07□□□□□ -0.64
SDC2-207ENST00000522911 PCDHA11Q9Y5I1 949 aa11.07□□□□□ -0.64
SDC2-207ENST00000522911 B4DLN1 442 aa11.06□□□□□ -0.64
SDC2-207ENST00000522911 NFIBO00712 420 aa11.06□□□□□ -0.64
SDC2-207ENST00000522911 ACRP10323 421 aa11.06□□□□□ -0.64
SDC2-207ENST00000522911 RFC2P35250 354 aa11.06□□□□□ -0.64
SDC2-207ENST00000522911 MRPL12P52815 198 aaKnown RBP11.06□□□□□ -0.64
SDC2-207ENST00000522911 MFAP1P55081 439 aaKnown RBP11.06□□□□□ -0.64
SDC2-207ENST00000522911 ZNF543Q08ER8 600 aa11.06□□□□□ -0.64
SDC2-207ENST00000522911 BRDTQ58F21 947 aaPredicted RBP11.06□□□□□ -0.64
SDC2-207ENST00000522911 SCFD2Q8WU76 684 aa11.06□□□□□ -0.64
SDC2-207ENST00000522911 MTG1Q9BT17 334 aaPredicted RBP11.06□□□□□ -0.64
SDC2-207ENST00000522911 TRPV6Q9H1D0 765 aa11.06□□□□□ -0.64
SDC2-207ENST00000522911 INCENPQ9NQS7 918 aa11.06□□□□□ -0.64
SDC2-207ENST00000522911 UMODL1Q5DID0 1318 aa11.06□□□□□ -0.64
SDC2-207ENST00000522911 RAD50Q92878 1312 aa11.06□□□□□ -0.64
SDC2-207ENST00000522911 SCN10AQ9Y5Y9 1956 aa11.05□□□□□ -0.64
SDC2-207ENST00000522911 A0A0D9SFI3 127 aa11.05□□□□□ -0.64
SDC2-207ENST00000522911 BDP1A6H8Y1 2624 aa11.05□□□□□ -0.64
SDC2-207ENST00000522911 GRXCR1A8MXD5 290 aa11.05□□□□□ -0.64
SDC2-207ENST00000522911 RRP1P56182 461 aaKnown RBP11.05□□□□□ -0.64
SDC2-207ENST00000522911 CCDC96Q2M329 555 aa11.05□□□□□ -0.64
SDC2-207ENST00000522911 CCDC178Q5BJE1 867 aa11.05□□□□□ -0.64
SDC2-207ENST00000522911 ANKRD45Q5TZF3 282 aa11.05□□□□□ -0.64
SDC2-207ENST00000522911 TTBK2Q6IQ55 1244 aa11.05□□□□□ -0.64
SDC2-207ENST00000522911 RASGRP2Q7LDG7 609 aa11.05□□□□□ -0.64
SDC2-207ENST00000522911 DGKHQ86XP1 1220 aa11.05□□□□□ -0.64
SDC2-207ENST00000522911 PHOSPHO2Q8TCD6 241 aa11.05□□□□□ -0.64
SDC2-207ENST00000522911 ANKS1AQ92625 1134 aa11.05□□□□□ -0.64
SDC2-207ENST00000522911 OSBPL3Q9H4L5 887 aa11.05□□□□□ -0.64
SDC2-207ENST00000522911 RNF41Q9H4P4 317 aaPredicted RBP11.05□□□□□ -0.64
SDC2-207ENST00000522911 SLC28A3Q9HAS3 691 aa11.05□□□□□ -0.64
SDC2-207ENST00000522911 ZBTB47Q9UFB7 747 aaPredicted RBP11.05□□□□□ -0.64
SDC2-207ENST00000522911 ISY1Q9ULR0 285 aaKnown RBP11.05□□□□□ -0.64
SDC2-207ENST00000522911 SLC4A7Q9Y6M7 1214 aa11.05□□□□□ -0.64
SDC2-207ENST00000522911 TNKSO95271 1327 aa11.05□□□□□ -0.64
SDC2-207ENST00000522911 CCDC171Q6TFL3 1326 aa11.05□□□□□ -0.64
SDC2-207ENST00000522911 SLC16A2P36021 539 aa11.04□□□□□ -0.64
SDC2-207ENST00000522911 SNAP25P60880 206 aa11.04□□□□□ -0.64
SDC2-207ENST00000522911 RPS6P62753 249 aaKnown RBP11.04□□□□□ -0.64
SDC2-207ENST00000522911 RBL2Q08999 1139 aa11.04□□□□□ -0.64
SDC2-207ENST00000522911 ADGRE1Q14246 886 aa11.04□□□□□ -0.64
SDC2-207ENST00000522911 PPP2R5BQ15173 497 aa11.04□□□□□ -0.64
SDC2-207ENST00000522911 TMEM63BQ5T3F8 832 aa11.04□□□□□ -0.64
SDC2-207ENST00000522911 RNF207Q6ZRF8 634 aa11.04□□□□□ -0.64
SDC2-207ENST00000522911 MFSD6Q6ZSS7 791 aa11.04□□□□□ -0.64
SDC2-207ENST00000522911 EEPD1Q7L9B9 569 aa11.04□□□□□ -0.64
SDC2-207ENST00000522911 SESTD1Q86VW0 696 aa11.04□□□□□ -0.64
SDC2-207ENST00000522911 ESR2Q92731 530 aa11.04□□□□□ -0.64
SDC2-207ENST00000522911 FAM227BQ96M60 508 aa11.04□□□□□ -0.64
SDC2-207ENST00000522911 ASB2Q96Q27 587 aa11.04□□□□□ -0.64
SDC2-207ENST00000522911 PURBQ96QR8 312 aaKnown RBP11.04□□□□□ -0.64
SDC2-207ENST00000522911 PRDM12Q9H4Q4 367 aa11.04□□□□□ -0.64
SDC2-207ENST00000522911 THEGQ9P2T0 379 aa11.04□□□□□ -0.64
SDC2-207ENST00000522911 YBX2Q9Y2T7 364 aaKnown RBP11.04□□□□□ -0.64
SDC2-207ENST00000522911 NCOR1O75376 2440 aa11.04□□□□□ -0.64
SDC2-207ENST00000522911 PTPDC1A2A3K4 754 aa11.03□□□□□ -0.64
SDC2-207ENST00000522911 TNFRSF10AO00220 468 aa11.03□□□□□ -0.64
SDC2-207ENST00000522911 PARNO95453 639 aaKnown RBP11.03□□□□□ -0.64
SDC2-207ENST00000522911 ATP2A2P16615 1042 aaKnown RBP11.03□□□□□ -0.64
SDC2-207ENST00000522911 CCL23P55773 120 aa11.03□□□□□ -0.64
SDC2-207ENST00000522911 PSMC6P62333 389 aa11.03□□□□□ -0.64
SDC2-207ENST00000522911 MRPS5P82675 430 aaKnown RBP11.03□□□□□ -0.64
SDC2-207ENST00000522911 GHRHRQ02643 423 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms