RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 CCDC191Q8NCU4 936 aa8.13□□□□□ -1.11
VPS13B-211ENST00000522802 TTLL11Q8NHH1 800 aa8.13□□□□□ -1.11
VPS13B-211ENST00000522802 ZNF417Q8TAU3 575 aa8.13□□□□□ -1.11
VPS13B-211ENST00000522802 ZNF587Q96SQ5 575 aaPredicted RBP8.13□□□□□ -1.11
VPS13B-211ENST00000522802 TMEM39BQ9GZU3 492 aa8.13□□□□□ -1.11
VPS13B-211ENST00000522802 CD209Q9NNX6 404 aa8.13□□□□□ -1.11
VPS13B-211ENST00000522802 MTMR10Q9NXD2 777 aa8.13□□□□□ -1.11
VPS13B-211ENST00000522802 CPA4Q9UI42 421 aa8.13□□□□□ -1.11
VPS13B-211ENST00000522802 LAS1LQ9Y4W2 734 aaKnown RBP8.13□□□□□ -1.11
VPS13B-211ENST00000522802 SNCAIPQ9Y6H5 919 aa8.13□□□□□ -1.11
VPS13B-211ENST00000522802 GHRHP01286 108 aa8.12□□□□□ -1.11
VPS13B-211ENST00000522802 ERCC3P19447 782 aa8.12□□□□□ -1.11
VPS13B-211ENST00000522802 PSMC4P43686 418 aa8.12□□□□□ -1.11
VPS13B-211ENST00000522802 PRMT2P55345 433 aa8.12□□□□□ -1.11
VPS13B-211ENST00000522802 SNRPNP63162 240 aaKnown RBP8.12□□□□□ -1.11
VPS13B-211ENST00000522802 PRKCZQ05513 592 aa8.12□□□□□ -1.11
VPS13B-211ENST00000522802 COL9A3Q14050 684 aaPredicted RBP8.12□□□□□ -1.11
VPS13B-211ENST00000522802 ENOX2Q16206 610 aaKnown RBP8.12□□□□□ -1.11
VPS13B-211ENST00000522802 PLA2G4EQ3MJ16 856 aa8.12□□□□□ -1.11
VPS13B-211ENST00000522802 DUSP27Q5VZP5 1158 aa8.12□□□□□ -1.11
VPS13B-211ENST00000522802 LINC00114Q6XXX2 140 aa8.12□□□□□ -1.11
VPS13B-211ENST00000522802 RAET1EQ8TD07 263 aa8.12□□□□□ -1.11
VPS13B-211ENST00000522802 DIS3LQ8TF46 1054 aaKnown RBP8.12□□□□□ -1.11
VPS13B-211ENST00000522802 PLD4Q96BZ4 506 aa8.12□□□□□ -1.11
VPS13B-211ENST00000522802 SPACA7Q96KW9 195 aa8.12□□□□□ -1.11
VPS13B-211ENST00000522802 GDF15Q99988 308 aa8.12□□□□□ -1.11
VPS13B-211ENST00000522802 LEMD3Q9Y2U8 911 aa8.12□□□□□ -1.11
VPS13B-211ENST00000522802 CSADQ9Y600 493 aa8.12□□□□□ -1.11
VPS13B-211ENST00000522802 TCP10L2B9ZVM9 353 aa8.11□□□□□ -1.11
VPS13B-211ENST00000522802 RGS9O75916 674 aaPredicted RBP8.11□□□□□ -1.11
VPS13B-211ENST00000522802 POLR3DP05423 398 aaPredicted RBP8.11□□□□□ -1.11
VPS13B-211ENST00000522802 CETPP11597 493 aa8.11□□□□□ -1.11
VPS13B-211ENST00000522802 EDN3P14138 238 aa8.11□□□□□ -1.11
VPS13B-211ENST00000522802 EIF2AK2P19525 551 aaKnown RBP8.11□□□□□ -1.11
VPS13B-211ENST00000522802 RBM5P52756 815 aaKnown RBP eCLIP8.11□□□□□ -1.11
VPS13B-211ENST00000522802 LMOD3Q0VAK6 560 aa8.11□□□□□ -1.11
VPS13B-211ENST00000522802 GRIK5Q16478 980 aa8.11□□□□□ -1.11
VPS13B-211ENST00000522802 PEAR1Q5VY43 1037 aaPredicted RBP8.11□□□□□ -1.11
VPS13B-211ENST00000522802 C17orf99Q6UX52 265 aa8.11□□□□□ -1.11
VPS13B-211ENST00000522802 C8orf86Q6ZUL3 223 aa8.11□□□□□ -1.11
VPS13B-211ENST00000522802 NPAS4Q8IUM7 802 aa8.11□□□□□ -1.11
VPS13B-211ENST00000522802 C7orf61Q8IZ16 206 aa8.11□□□□□ -1.11
VPS13B-211ENST00000522802 NUDT8Q8WV74 236 aa8.11□□□□□ -1.11
VPS13B-211ENST00000522802 SMG9Q9H0W8 520 aaKnown RBP8.11□□□□□ -1.11
VPS13B-211ENST00000522802 RBSNQ9H1K0 784 aa8.11□□□□□ -1.11
VPS13B-211ENST00000522802 TDRD3Q9H7E2 651 aaKnown RBP8.11□□□□□ -1.11
VPS13B-211ENST00000522802 ZCCHC17Q9NP64 241 aaKnown RBP8.11□□□□□ -1.11
VPS13B-211ENST00000522802 DZANK1Q9NVP4 752 aa8.11□□□□□ -1.11
VPS13B-211ENST00000522802 ZNF70Q9UC06 446 aaPredicted RBP8.11□□□□□ -1.11
VPS13B-211ENST00000522802 ZMYND8Q9ULU4 1186 aaPredicted RBP8.11□□□□□ -1.11
VPS13B-211ENST00000522802 LILRB5O75023 590 aa8.1□□□□□ -1.11
VPS13B-211ENST00000522802 ADAM23O75077 832 aa8.1□□□□□ -1.11
VPS13B-211ENST00000522802 ITGB2P05107 769 aa8.1□□□□□ -1.11
VPS13B-211ENST00000522802 IGKV5-2P06315 115 aa8.1□□□□□ -1.11
VPS13B-211ENST00000522802 P4HBP07237 508 aaKnown RBP8.1□□□□□ -1.11
VPS13B-211ENST00000522802 ELNP15502 786 aa8.1□□□□□ -1.11
VPS13B-211ENST00000522802 SYN1P17600 705 aa8.1□□□□□ -1.11
VPS13B-211ENST00000522802 KCNJ4P48050 445 aa8.1□□□□□ -1.11
VPS13B-211ENST00000522802 AFF1P51825 1210 aaKnown RBP8.1□□□□□ -1.11
VPS13B-211ENST00000522802 CACNB3P54284 484 aa8.1□□□□□ -1.11
VPS13B-211ENST00000522802 MFAP1P55081 439 aaKnown RBP8.1□□□□□ -1.11
VPS13B-211ENST00000522802 ATP11AP98196 1134 aa8.1□□□□□ -1.11
VPS13B-211ENST00000522802 CHRNDQ07001 517 aa8.1□□□□□ -1.11
VPS13B-211ENST00000522802 SNAPC2Q13487 334 aa8.1□□□□□ -1.11
VPS13B-211ENST00000522802 CCDC146Q8IYE0 955 aa8.1□□□□□ -1.11
VPS13B-211ENST00000522802 ZKSCAN4Q969J2 545 aaPredicted RBP8.1□□□□□ -1.11
VPS13B-211ENST00000522802 CCDC74AQ96AQ1 378 aa8.1□□□□□ -1.11
VPS13B-211ENST00000522802 GUCD1Q96NT3 240 aa8.1□□□□□ -1.11
VPS13B-211ENST00000522802 WRNIP1Q96S55 665 aa8.1□□□□□ -1.11
VPS13B-211ENST00000522802 METTL22Q9BUU2 404 aaPredicted RBP8.1□□□□□ -1.11
VPS13B-211ENST00000522802 PBX4Q9BYU1 374 aa8.1□□□□□ -1.11
VPS13B-211ENST00000522802 RASSF4Q9H2L5 321 aa8.1□□□□□ -1.11
VPS13B-211ENST00000522802 JPH1Q9HDC5 661 aaPredicted RBP8.1□□□□□ -1.11
VPS13B-211ENST00000522802 GABRQQ9UN88 632 aa8.1□□□□□ -1.11
VPS13B-211ENST00000522802 COL2A1P02458 1487 aaPredicted RBP8.1□□□□□ -1.11
VPS13B-211ENST00000522802 PTPRFP10586 1907 aa8.09□□□□□ -1.11
VPS13B-211ENST00000522802 RPTORQ8N122 1335 aa8.09□□□□□ -1.11
VPS13B-211ENST00000522802 PDHXO00330 501 aa8.09□□□□□ -1.11
VPS13B-211ENST00000522802 MSTNO14793 375 aa8.09□□□□□ -1.11
VPS13B-211ENST00000522802 TAF5LO75529 589 aa8.09□□□□□ -1.11
VPS13B-211ENST00000522802 WDHD1O75717 1129 aaPredicted RBP8.09□□□□□ -1.11
VPS13B-211ENST00000522802 SGPL1O95470 568 aa8.09□□□□□ -1.11
VPS13B-211ENST00000522802 IL1R1P14778 569 aa8.09□□□□□ -1.11
VPS13B-211ENST00000522802 ACPPP15309 386 aa8.09□□□□□ -1.11
VPS13B-211ENST00000522802 BMP8BP34820 402 aa8.09□□□□□ -1.11
VPS13B-211ENST00000522802 IGHMBP2P38935 993 aaKnown RBP8.09□□□□□ -1.11
VPS13B-211ENST00000522802 MAGEA10P43363 369 aaPredicted RBP8.09□□□□□ -1.11
VPS13B-211ENST00000522802 UBXN2AP68543 259 aa8.09□□□□□ -1.11
VPS13B-211ENST00000522802 TNFAIP1Q13829 316 aa8.09□□□□□ -1.11
VPS13B-211ENST00000522802 CWF19L2Q2TBE0 894 aaKnown RBP8.09□□□□□ -1.11
VPS13B-211ENST00000522802 LRIT3Q3SXY7 679 aa8.09□□□□□ -1.11
VPS13B-211ENST00000522802 UBE3BQ7Z3V4 1068 aa8.09□□□□□ -1.11
VPS13B-211ENST00000522802 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.09□□□□□ -1.11
VPS13B-211ENST00000522802 PAWRQ96IZ0 340 aaKnown RBP8.09□□□□□ -1.11
VPS13B-211ENST00000522802 DEFB118Q96PH6 123 aa8.09□□□□□ -1.11
VPS13B-211ENST00000522802 SPOCK3Q9BQ16 436 aa8.09□□□□□ -1.11
VPS13B-211ENST00000522802 ANKRD2Q9GZV1 360 aa8.09□□□□□ -1.11
VPS13B-211ENST00000522802 LATS2Q9NRM7 1088 aa8.09□□□□□ -1.11
VPS13B-211ENST00000522802 MAP3K2Q9Y2U5 619 aa8.09□□□□□ -1.11
VPS13B-211ENST00000522802 CNTNAP5Q8WYK1 1306 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms