RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 CSPP1Q1MSJ5 1256 aa14.94□□□□□ -0.02
CPNE3-205ENST00000522240 FAM173BQ6P4H8 233 aa14.94□□□□□ -0.02
CPNE3-205ENST00000522240 TMEM87AQ8NBN3 555 aa14.94□□□□□ -0.02
CPNE3-205ENST00000522240 CCDC102AQ96A19 550 aa14.94□□□□□ -0.02
CPNE3-205ENST00000522240 TEX13BQ9BXU2 312 aa14.94□□□□□ -0.02
CPNE3-205ENST00000522240 RAVER2Q9HCJ3 691 aaKnown RBP14.94□□□□□ -0.02
CPNE3-205ENST00000522240 CFAP45Q9UL16 551 aa14.94□□□□□ -0.02
CPNE3-205ENST00000522240 ABT1Q9ULW3 272 aaKnown RBP14.94□□□□□ -0.02
CPNE3-205ENST00000522240 NOL7Q9UMY1 257 aaKnown RBP14.94□□□□□ -0.02
CPNE3-205ENST00000522240 PCDHA6Q9UN73 950 aa14.94□□□□□ -0.02
CPNE3-205ENST00000522240 PCDHA8Q9Y5H6 950 aa14.94□□□□□ -0.02
CPNE3-205ENST00000522240 CCDC194A0A1B0GVG4 234 aa14.93□□□□□ -0.02
CPNE3-205ENST00000522240 DDX11L8A8MPP1 907 aa14.93□□□□□ -0.02
CPNE3-205ENST00000522240 BTBD19C9JJ37 291 aa14.93□□□□□ -0.02
CPNE3-205ENST00000522240 COPB2P35606 906 aa14.93□□□□□ -0.02
CPNE3-205ENST00000522240 PDAP1Q13442 181 aaKnown RBP14.93□□□□□ -0.02
CPNE3-205ENST00000522240 TMEM132BQ14DG7 1078 aa14.93□□□□□ -0.02
CPNE3-205ENST00000522240 AGBL1Q96MI9 1066 aa14.93□□□□□ -0.02
CPNE3-205ENST00000522240 SCAND2PQ9GZW5 306 aaPredicted RBP14.93□□□□□ -0.02
CPNE3-205ENST00000522240 POLR3EQ9NVU0 708 aa14.93□□□□□ -0.02
CPNE3-205ENST00000522240 MAP3K20Q9NYL2 800 aaKnown RBP14.93□□□□□ -0.02
CPNE3-205ENST00000522240 TCHHQ07283 1943 aa14.92□□□□□ -0.02
CPNE3-205ENST00000522240 MEIS2O14770 477 aa14.92□□□□□ -0.02
CPNE3-205ENST00000522240 ADAMTS3O15072 1205 aa14.92□□□□□ -0.02
CPNE3-205ENST00000522240 YEATS4O95619 227 aa14.92□□□□□ -0.02
CPNE3-205ENST00000522240 FOSP01100 380 aaPredicted RBP14.92□□□□□ -0.02
CPNE3-205ENST00000522240 HSPA8P11142 646 aaKnown RBP14.92□□□□□ -0.02
CPNE3-205ENST00000522240 TAL1P17542 331 aaPredicted RBP14.92□□□□□ -0.02
CPNE3-205ENST00000522240 NCLP19338 710 aaKnown RBP14.92□□□□□ -0.02
CPNE3-205ENST00000522240 PTMSP20962 102 aa14.92□□□□□ -0.02
CPNE3-205ENST00000522240 MCM4P33991 863 aa14.92□□□□□ -0.02
CPNE3-205ENST00000522240 NASPP49321 788 aaPredicted RBP14.92□□□□□ -0.02
CPNE3-205ENST00000522240 MKRN3Q13064 507 aaKnown RBP14.92□□□□□ -0.02
CPNE3-205ENST00000522240 NONOQ15233 471 aaKnown RBP eCLIP14.92□□□□□ -0.02
CPNE3-205ENST00000522240 FOXD4L6Q3SYB3 417 aaPredicted RBP14.92□□□□□ -0.02
CPNE3-205ENST00000522240 EARS2Q5JPH6 523 aaKnown RBP14.92□□□□□ -0.02
CPNE3-205ENST00000522240 SNRNP48Q6IEG0 339 aaKnown RBP14.92□□□□□ -0.02
CPNE3-205ENST00000522240 FOXD4L3Q6VB84 417 aaPredicted RBP14.92□□□□□ -0.02
CPNE3-205ENST00000522240 PIK3AP1Q6ZUJ8 805 aa14.92□□□□□ -0.02
CPNE3-205ENST00000522240 MCF2L2Q86YR7 1114 aa14.92□□□□□ -0.02
CPNE3-205ENST00000522240 CPXCR1Q8N123 301 aa14.92□□□□□ -0.02
CPNE3-205ENST00000522240 RASGRP4Q8TDF6 673 aa14.92□□□□□ -0.02
CPNE3-205ENST00000522240 USP28Q96RU2 1077 aa14.92□□□□□ -0.02
CPNE3-205ENST00000522240 PARK7Q99497 189 aaKnown RBP14.92□□□□□ -0.02
CPNE3-205ENST00000522240 P2RX7Q99572 595 aaKnown RBP14.92□□□□□ -0.02
CPNE3-205ENST00000522240 RTEL1Q9NZ71 1219 aa14.92□□□□□ -0.02
CPNE3-205ENST00000522240 RABGAP1Q9Y3P9 1069 aa14.92□□□□□ -0.02
CPNE3-205ENST00000522240 MORC2Q9Y6X9 1032 aaPredicted RBP14.92□□□□□ -0.02
CPNE3-205ENST00000522240 ELP1O95163 1332 aa14.92□□□□□ -0.02
CPNE3-205ENST00000522240 FAM205CA6NFA0 338 aa14.91□□□□□ -0.02
CPNE3-205ENST00000522240 FAM155AB1AL88 458 aaPredicted RBP14.91□□□□□ -0.02
CPNE3-205ENST00000522240 PDHXO00330 501 aa14.91□□□□□ -0.02
CPNE3-205ENST00000522240 BMP15O95972 392 aa14.91□□□□□ -0.02
CPNE3-205ENST00000522240 ALAS1P13196 640 aa14.91□□□□□ -0.02
CPNE3-205ENST00000522240 HSD17B4P51659 736 aa14.91□□□□□ -0.02
CPNE3-205ENST00000522240 INHBEP58166 350 aa14.91□□□□□ -0.02
CPNE3-205ENST00000522240 SREBF2Q12772 1141 aa14.91□□□□□ -0.02
CPNE3-205ENST00000522240 ORC2Q13416 577 aaPredicted RBP14.91□□□□□ -0.02
CPNE3-205ENST00000522240 UBE2SQ16763 222 aa14.91□□□□□ -0.02
CPNE3-205ENST00000522240 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.91□□□□□ -0.02
CPNE3-205ENST00000522240 RIOX2Q8IUF8 465 aa14.91□□□□□ -0.02
CPNE3-205ENST00000522240 CHST13Q8NET6 341 aa14.91□□□□□ -0.02
CPNE3-205ENST00000522240 CLEC4DQ8WXI8 215 aa14.91□□□□□ -0.02
CPNE3-205ENST00000522240 BEGAINQ9BUH8 593 aa14.91□□□□□ -0.02
CPNE3-205ENST00000522240 RNF146Q9NTX7 359 aa14.91□□□□□ -0.02
CPNE3-205ENST00000522240 BIN2Q9UBW5 565 aaPredicted RBP14.91□□□□□ -0.02
CPNE3-205ENST00000522240 CNPY2Q9Y2B0 182 aa14.91□□□□□ -0.02
CPNE3-205ENST00000522240 SMCHD1A6NHR9 2005 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 GCOM1H8Y6P7 765 aaPredicted RBP14.9□□□□□ -0.02
CPNE3-205ENST00000522240 FIBPO43427 364 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 CNMDO75829 334 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 POLR2MP0CAP2 368 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 MAP2K2P36507 400 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 STAT3P40763 770 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 GCLCP48506 637 aaPredicted RBP14.9□□□□□ -0.02
CPNE3-205ENST00000522240 TOB1P50616 345 aaPredicted RBP14.9□□□□□ -0.02
CPNE3-205ENST00000522240 NOM1Q5C9Z4 860 aaKnown RBP14.9□□□□□ -0.02
CPNE3-205ENST00000522240 TTC38Q5R3I4 469 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 JAKMIP3Q5VZ66 844 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 ANO1Q5XXA6 986 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 CHAMP1Q96JM3 812 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 CAPNS2Q96L46 248 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 TRERF1Q96PN7 1200 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 ANO3Q9BYT9 981 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 SPATC1LQ9H0A9 340 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 ACAD9Q9H845 621 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 EHMT1Q9H9B1 1298 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 BTBD7Q9P203 1132 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 FBXO40Q9UH90 709 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 PCDHB8Q9UN66 801 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 CEP131Q9UPN4 1083 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 PCDHB13Q9Y5F0 798 aa14.9□□□□□ -0.02
CPNE3-205ENST00000522240 THSD7BQ9C0I4 1608 aa14.89□□□□□ -0.03
CPNE3-205ENST00000522240 SPDYE3A6NKU9 549 aa14.89□□□□□ -0.03
CPNE3-205ENST00000522240 NFIBO00712 420 aa14.89□□□□□ -0.03
CPNE3-205ENST00000522240 SLC25A27O95847 323 aa14.89□□□□□ -0.03
CPNE3-205ENST00000522240 CFBP00751 764 aa14.89□□□□□ -0.03
CPNE3-205ENST00000522240 FXR2P51116 673 aaKnown RBP eCLIP14.89□□□□□ -0.03
CPNE3-205ENST00000522240 NFKBIBQ15653 356 aa14.89□□□□□ -0.03
CPNE3-205ENST00000522240 MUM1L1Q5H9M0 696 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms