RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 PTPRFP10586 1907 aa24.4■■□□□ 1.5
R3HCC1-208ENST00000522012 PIK3CDO00329 1044 aa24.4■■□□□ 1.5
R3HCC1-208ENST00000522012 STK38Q15208 465 aa24.4■■□□□ 1.5
R3HCC1-208ENST00000522012 TTC38Q5R3I4 469 aa24.4■■□□□ 1.5
R3HCC1-208ENST00000522012 TBCKQ8TEA7 893 aa24.4■■□□□ 1.5
R3HCC1-208ENST00000522012 HHIPL1Q96JK4 782 aa24.4■■□□□ 1.5
R3HCC1-208ENST00000522012 PCDHB6Q9Y5E3 794 aa24.4■■□□□ 1.5
R3HCC1-208ENST00000522012 TESPA1A2RU30 521 aaPredicted RBP24.39■■□□□ 1.49
R3HCC1-208ENST00000522012 SPDYE3A6NKU9 549 aa24.39■■□□□ 1.49
R3HCC1-208ENST00000522012 FAM155AB1AL88 458 aaPredicted RBP24.39■■□□□ 1.49
R3HCC1-208ENST00000522012 NASPP49321 788 aaPredicted RBP24.39■■□□□ 1.49
R3HCC1-208ENST00000522012 GRM1Q13255 1194 aa24.39■■□□□ 1.49
R3HCC1-208ENST00000522012 AP3B2Q13367 1082 aa24.39■■□□□ 1.49
R3HCC1-208ENST00000522012 TKFCQ3LXA3 575 aa24.39■■□□□ 1.49
R3HCC1-208ENST00000522012 FCHSD1Q86WN1 690 aa24.39■■□□□ 1.49
R3HCC1-208ENST00000522012 TEX2Q8IWB9 1127 aa24.39■■□□□ 1.49
R3HCC1-208ENST00000522012 SMCR8Q8TEV9 937 aaPredicted RBP24.39■■□□□ 1.49
R3HCC1-208ENST00000522012 RCOR1Q9UKL0 485 aa24.39■■□□□ 1.49
R3HCC1-208ENST00000522012 FOSP01100 380 aaPredicted RBP24.38■■□□□ 1.49
R3HCC1-208ENST00000522012 ZNF174Q15697 407 aa24.38■■□□□ 1.49
R3HCC1-208ENST00000522012 TMEM87AQ8NBN3 555 aa24.38■■□□□ 1.49
R3HCC1-208ENST00000522012 LINC00301Q8NCQ3 95 aa24.38■■□□□ 1.49
R3HCC1-208ENST00000522012 ANO3Q9BYT9 981 aa24.38■■□□□ 1.49
R3HCC1-208ENST00000522012 RBPJLQ9UBG7 517 aa24.38■■□□□ 1.49
R3HCC1-208ENST00000522012 RABGAP1Q9Y3P9 1069 aa24.38■■□□□ 1.49
R3HCC1-208ENST00000522012 WNT7AO00755 349 aa24.37■■□□□ 1.49
R3HCC1-208ENST00000522012 CNMDO75829 334 aa24.37■■□□□ 1.49
R3HCC1-208ENST00000522012 YEATS4O95619 227 aa24.37■■□□□ 1.49
R3HCC1-208ENST00000522012 TPRNQ4KMQ1 711 aa24.37■■□□□ 1.49
R3HCC1-208ENST00000522012 NEK8Q86SG6 692 aa24.37■■□□□ 1.49
R3HCC1-208ENST00000522012 GTF3C2Q8WUA4 911 aaPredicted RBP24.37■■□□□ 1.49
R3HCC1-208ENST00000522012 SPATC1LQ9H0A9 340 aa24.37■■□□□ 1.49
R3HCC1-208ENST00000522012 LMBRD1Q9NUN5 540 aa24.37■■□□□ 1.49
R3HCC1-208ENST00000522012 RLFQ13129 1914 aa24.37■■□□□ 1.49
R3HCC1-208ENST00000522012 SLC39A14Q15043 492 aa24.36■■□□□ 1.49
R3HCC1-208ENST00000522012 LETM2Q2VYF4 491 aa24.36■■□□□ 1.49
R3HCC1-208ENST00000522012 NSMFQ6X4W1 530 aa24.36■■□□□ 1.49
R3HCC1-208ENST00000522012 RIOX2Q8IUF8 465 aa24.36■■□□□ 1.49
R3HCC1-208ENST00000522012 TXNRD2Q9NNW7 524 aa24.36■■□□□ 1.49
R3HCC1-208ENST00000522012 CEP131Q9UPN4 1083 aa24.36■■□□□ 1.49
R3HCC1-208ENST00000522012 SPTLC2O15270 562 aa24.35■■□□□ 1.49
R3HCC1-208ENST00000522012 MCM7P33993 719 aa24.35■■□□□ 1.49
R3HCC1-208ENST00000522012 HSD17B4P51659 736 aa24.35■■□□□ 1.49
R3HCC1-208ENST00000522012 INHBEP58166 350 aa24.35■■□□□ 1.49
R3HCC1-208ENST00000522012 CYP4F22Q6NT55 531 aa24.35■■□□□ 1.49
R3HCC1-208ENST00000522012 PARK7Q99497 189 aaKnown RBP24.35■■□□□ 1.49
R3HCC1-208ENST00000522012 ACAD9Q9H845 621 aa24.35■■□□□ 1.49
R3HCC1-208ENST00000522012 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.35■■□□□ 1.49
R3HCC1-208ENST00000522012 PTMSP20962 102 aa24.35■■□□□ 1.49
R3HCC1-208ENST00000522012 PTPAQ15257 358 aa24.35■■□□□ 1.49
R3HCC1-208ENST00000522012 RNF207Q6ZRF8 634 aa24.35■■□□□ 1.49
R3HCC1-208ENST00000522012 NCAPG2Q86XI2 1143 aa24.35■■□□□ 1.49
R3HCC1-208ENST00000522012 SAMD3Q8N6K7 520 aa24.35■■□□□ 1.49
R3HCC1-208ENST00000522012 CHST13Q8NET6 341 aa24.35■■□□□ 1.49
R3HCC1-208ENST00000522012 KCNG4Q8TDN1 519 aa24.35■■□□□ 1.49
R3HCC1-208ENST00000522012 MOV10L1Q9BXT6 1211 aaKnown RBP24.35■■□□□ 1.49
R3HCC1-208ENST00000522012 CREBZFQ9NS37 354 aa24.35■■□□□ 1.49
R3HCC1-208ENST00000522012 ELP1O95163 1332 aa24.34■■□□□ 1.49
R3HCC1-208ENST00000522012 PARP14Q460N5 1801 aa24.34■■□□□ 1.49
R3HCC1-208ENST00000522012 IGF2BP3O00425 579 aaKnown RBP eCLIP24.34■■□□□ 1.49
R3HCC1-208ENST00000522012 CCNT1O60563 726 aaKnown RBP24.34■■□□□ 1.49
R3HCC1-208ENST00000522012 GADD45BO75293 160 aaPredicted RBP24.34■■□□□ 1.49
R3HCC1-208ENST00000522012 ME1P48163 572 aa24.34■■□□□ 1.49
R3HCC1-208ENST00000522012 Q3C1V9 767 aa24.34■■□□□ 1.49
R3HCC1-208ENST00000522012 MAP3K20Q9NYL2 800 aaKnown RBP24.34■■□□□ 1.49
R3HCC1-208ENST00000522012 MARCKSP29966 332 aaPredicted RBP24.33■■□□□ 1.49
R3HCC1-208ENST00000522012 GCLCP48506 637 aaPredicted RBP24.33■■□□□ 1.49
R3HCC1-208ENST00000522012 RPS6P62753 249 aaKnown RBP24.33■■□□□ 1.49
R3HCC1-208ENST00000522012 GHRHRQ02643 423 aa24.33■■□□□ 1.49
R3HCC1-208ENST00000522012 SREBF2Q12772 1141 aa24.33■■□□□ 1.49
R3HCC1-208ENST00000522012 DEFB115Q30KQ5 88 aa24.33■■□□□ 1.49
R3HCC1-208ENST00000522012 SLC30A10Q6XR72 485 aa24.33■■□□□ 1.49
R3HCC1-208ENST00000522012 SYTL5Q8TDW5 730 aaPredicted RBP24.33■■□□□ 1.49
R3HCC1-208ENST00000522012 EHMT1Q9H9B1 1298 aa24.33■■□□□ 1.49
R3HCC1-208ENST00000522012 FBXO40Q9UH90 709 aa24.33■■□□□ 1.49
R3HCC1-208ENST00000522012 GOLGA6L4A6NEF3 574 aa24.32■■□□□ 1.48
R3HCC1-208ENST00000522012 SLC25A27O95847 323 aa24.32■■□□□ 1.48
R3HCC1-208ENST00000522012 BMP15O95972 392 aa24.32■■□□□ 1.48
R3HCC1-208ENST00000522012 ERVK-9P63128 1117 aa24.32■■□□□ 1.48
R3HCC1-208ENST00000522012 ERVK-24P63145 666 aa24.32■■□□□ 1.48
R3HCC1-208ENST00000522012 BAATQ14032 418 aaPredicted RBP24.32■■□□□ 1.48
R3HCC1-208ENST00000522012 IFNL1Q8IU54 200 aa24.32■■□□□ 1.48
R3HCC1-208ENST00000522012 ANKRD13CQ8N6S4 541 aa24.32■■□□□ 1.48
R3HCC1-208ENST00000522012 GPRC5AQ8NFJ5 357 aa24.32■■□□□ 1.48
R3HCC1-208ENST00000522012 ERCC3P19447 782 aa24.31■■□□□ 1.48
R3HCC1-208ENST00000522012 SREBF1P36956 1147 aa24.31■■□□□ 1.48
R3HCC1-208ENST00000522012 ARHGAP4P98171 946 aa24.31■■□□□ 1.48
R3HCC1-208ENST00000522012 COL20A1Q9P218 1284 aa24.31■■□□□ 1.48
R3HCC1-208ENST00000522012 EDIL3O43854 480 aa24.3■■□□□ 1.48
R3HCC1-208ENST00000522012 PPP6R2O75170 966 aa24.3■■□□□ 1.48
R3HCC1-208ENST00000522012 COPB2P35606 906 aa24.3■■□□□ 1.48
R3HCC1-208ENST00000522012 USP11P51784 963 aa24.3■■□□□ 1.48
R3HCC1-208ENST00000522012 UBE2HP62256 183 aa24.3■■□□□ 1.48
R3HCC1-208ENST00000522012 PTGDRQ13258 359 aa24.3■■□□□ 1.48
R3HCC1-208ENST00000522012 ZIC5Q96T25 663 aa24.3■■□□□ 1.48
R3HCC1-208ENST00000522012 ZCCHC17Q9NP64 241 aaKnown RBP24.3■■□□□ 1.48
R3HCC1-208ENST00000522012 PCDHA7Q9UN72 937 aa24.3■■□□□ 1.48
R3HCC1-208ENST00000522012 RASSF10A6NK89 507 aa24.3■■□□□ 1.48
R3HCC1-208ENST00000522012 TDP2O95551 362 aa24.3■■□□□ 1.48
R3HCC1-208ENST00000522012 UBXN2AP68543 259 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms