RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 ZNF576Q9H609 170 aa24.5■■□□□ 1.51
PABPC1-218ENST00000521865 ZNF543Q08ER8 600 aa24.49■■□□□ 1.51
PABPC1-218ENST00000521865 SLC30A10Q6XR72 485 aa24.49■■□□□ 1.51
PABPC1-218ENST00000521865 RNF207Q6ZRF8 634 aa24.49■■□□□ 1.51
PABPC1-218ENST00000521865 TBC1D10CQ8IV04 446 aa24.49■■□□□ 1.51
PABPC1-218ENST00000521865 ESR2Q92731 530 aa24.49■■□□□ 1.51
PABPC1-218ENST00000521865 SEZ6LQ9BYH1 1024 aa24.49■■□□□ 1.51
PABPC1-218ENST00000521865 TRPV6Q9H1D0 765 aa24.49■■□□□ 1.51
PABPC1-218ENST00000521865 MTIF3Q9H2K0 278 aaKnown RBP24.49■■□□□ 1.51
PABPC1-218ENST00000521865 IL23AQ9NPF7 189 aa24.49■■□□□ 1.51
PABPC1-218ENST00000521865 GRXCR1A8MXD5 290 aa24.48■■□□□ 1.51
PABPC1-218ENST00000521865 ZNF213O14771 459 aa24.48■■□□□ 1.51
PABPC1-218ENST00000521865 SDSP20132 328 aa24.48■■□□□ 1.51
PABPC1-218ENST00000521865 CCL23P55773 120 aa24.48■■□□□ 1.51
PABPC1-218ENST00000521865 DUSP28Q4G0W2 176 aa24.48■■□□□ 1.51
PABPC1-218ENST00000521865 YTHDC1Q96MU7 727 aaKnown RBP24.48■■□□□ 1.51
PABPC1-218ENST00000521865 ZKSCAN3Q9BRR0 538 aa24.48■■□□□ 1.51
PABPC1-218ENST00000521865 GRIN2DO15399 1336 aa24.47■■□□□ 1.51
PABPC1-218ENST00000521865 UMODL1Q5DID0 1318 aa24.47■■□□□ 1.51
PABPC1-218ENST00000521865 B4GALT4O60513 344 aa24.47■■□□□ 1.51
PABPC1-218ENST00000521865 FGBP02675 491 aa24.47■■□□□ 1.51
PABPC1-218ENST00000521865 MYL3P08590 195 aa24.47■■□□□ 1.51
PABPC1-218ENST00000521865 PDE4DQ08499 809 aa24.47■■□□□ 1.51
PABPC1-218ENST00000521865 AAMPQ13685 434 aa24.47■■□□□ 1.51
PABPC1-218ENST00000521865 CLEC4DQ8WXI8 215 aa24.47■■□□□ 1.51
PABPC1-218ENST00000521865 PBX4Q9BYU1 374 aa24.47■■□□□ 1.51
PABPC1-218ENST00000521865 GPHNQ9NQX3 736 aaPredicted RBP24.47■■□□□ 1.51
PABPC1-218ENST00000521865 POLR3EQ9NVU0 708 aa24.47■■□□□ 1.51
PABPC1-218ENST00000521865 CUL9Q8IWT3 2517 aa24.46■■□□□ 1.51
PABPC1-218ENST00000521865 LOC102724159A0A0B4J2E5 919 aa24.46■■□□□ 1.51
PABPC1-218ENST00000521865 GOLGA8HP0CJ92 632 aa24.46■■□□□ 1.51
PABPC1-218ENST00000521865 PBX2P40425 430 aa24.46■■□□□ 1.51
PABPC1-218ENST00000521865 CPT1AP50416 773 aa24.46■■□□□ 1.51
PABPC1-218ENST00000521865 PWP2Q15269 919 aaKnown RBP24.46■■□□□ 1.51
PABPC1-218ENST00000521865 USH1GQ495M9 461 aa24.46■■□□□ 1.51
PABPC1-218ENST00000521865 SMC5Q8IY18 1101 aa24.46■■□□□ 1.51
PABPC1-218ENST00000521865 OR6J1Q8NGC5 347 aa24.46■■□□□ 1.51
PABPC1-218ENST00000521865 DIAPH3Q9NSV4 1193 aa24.46■■□□□ 1.51
PABPC1-218ENST00000521865 CDH23Q9H251 3354 aa24.45■■□□□ 1.51
PABPC1-218ENST00000521865 NEDD4P46934 1319 aa24.45■■□□□ 1.5
PABPC1-218ENST00000521865 RPS6P62753 249 aaKnown RBP24.45■■□□□ 1.5
PABPC1-218ENST00000521865 BRDTQ58F21 947 aaPredicted RBP24.45■■□□□ 1.5
PABPC1-218ENST00000521865 GPATCH4Q5T3I0 446 aaKnown RBP24.45■■□□□ 1.5
PABPC1-218ENST00000521865 RASIP1Q5U651 963 aa24.45■■□□□ 1.5
PABPC1-218ENST00000521865 CWC27Q6UX04 472 aaKnown RBP24.45■■□□□ 1.5
PABPC1-218ENST00000521865 CHD1LQ86WJ1 897 aa24.45■■□□□ 1.5
PABPC1-218ENST00000521865 GAS2L1Q99501 681 aaPredicted RBP24.45■■□□□ 1.5
PABPC1-218ENST00000521865 NOC4LQ9BVI4 516 aaKnown RBP24.45■■□□□ 1.5
PABPC1-218ENST00000521865 MSRAQ9UJ68 235 aa24.45■■□□□ 1.5
PABPC1-218ENST00000521865 WDR19Q8NEZ3 1342 aa24.44■■□□□ 1.5
PABPC1-218ENST00000521865 B4DLN1 442 aa24.44■■□□□ 1.5
PABPC1-218ENST00000521865 SNHG28P0DPA3 235 aa24.44■■□□□ 1.5
PABPC1-218ENST00000521865 MRPL12P52815 198 aaKnown RBP24.44■■□□□ 1.5
PABPC1-218ENST00000521865 PPP2R5BQ15173 497 aa24.44■■□□□ 1.5
PABPC1-218ENST00000521865 OTOP2Q7RTS6 562 aa24.44■■□□□ 1.5
PABPC1-218ENST00000521865 IQCA1Q86XH1 822 aa24.44■■□□□ 1.5
PABPC1-218ENST00000521865 HERVK_113Q902F9 699 aa24.44■■□□□ 1.5
PABPC1-218ENST00000521865 UBA5Q9GZZ9 404 aa24.44■■□□□ 1.5
PABPC1-218ENST00000521865 ALDH8A1Q9H2A2 487 aaPredicted RBP24.44■■□□□ 1.5
PABPC1-218ENST00000521865 KAT14Q9H8E8 782 aa24.44■■□□□ 1.5
PABPC1-218ENST00000521865 LRRC37A2A6NM11 1700 aa24.44■■□□□ 1.5
PABPC1-218ENST00000521865 RAD50Q92878 1312 aa24.43■■□□□ 1.5
PABPC1-218ENST00000521865 RAB30Q15771 203 aa24.43■■□□□ 1.5
PABPC1-218ENST00000521865 FAM47CQ5HY64 1035 aa24.43■■□□□ 1.5
PABPC1-218ENST00000521865 DGKHQ86XP1 1220 aa24.43■■□□□ 1.5
PABPC1-218ENST00000521865 PLEKHM2Q8IWE5 1019 aa24.43■■□□□ 1.5
PABPC1-218ENST00000521865 CPVLQ9H3G5 476 aa24.43■■□□□ 1.5
PABPC1-218ENST00000521865 CXXC1Q9P0U4 656 aaPredicted RBP24.43■■□□□ 1.5
PABPC1-218ENST00000521865 EYSQ5T1H1 3165 aa24.43■■□□□ 1.5
PABPC1-218ENST00000521865 KDM4AO75164 1064 aa24.42■■□□□ 1.5
PABPC1-218ENST00000521865 SUPT20HL2P0C7V6 817 aa24.42■■□□□ 1.5
PABPC1-218ENST00000521865 PURAQ00577 322 aaKnown RBP24.42■■□□□ 1.5
PABPC1-218ENST00000521865 CCDC178Q5BJE1 867 aa24.42■■□□□ 1.5
PABPC1-218ENST00000521865 RPUSD2Q8IZ73 545 aaKnown RBP24.42■■□□□ 1.5
PABPC1-218ENST00000521865 PNMA1Q8ND90 353 aa24.42■■□□□ 1.5
PABPC1-218ENST00000521865 DNERQ8NFT8 737 aa24.42■■□□□ 1.5
PABPC1-218ENST00000521865 MTG1Q9BT17 334 aaPredicted RBP24.42■■□□□ 1.5
PABPC1-218ENST00000521865 WNT8AQ9H1J5 351 aa24.42■■□□□ 1.5
PABPC1-218ENST00000521865 TRMT13Q9NUP7 481 aaKnown RBP24.42■■□□□ 1.5
PABPC1-218ENST00000521865 RBM47A0AV96 593 aaKnown RBP24.41■■□□□ 1.5
PABPC1-218ENST00000521865 ZBBXA8MT70 800 aa24.41■■□□□ 1.5
PABPC1-218ENST00000521865 NKRFO15226 690 aaKnown RBP eCLIP24.41■■□□□ 1.5
PABPC1-218ENST00000521865 NUCB1Q02818 461 aa24.41■■□□□ 1.5
PABPC1-218ENST00000521865 SCFD2Q8WU76 684 aa24.41■■□□□ 1.5
PABPC1-218ENST00000521865 PPM1EQ8WY54 764 aa24.41■■□□□ 1.5
PABPC1-218ENST00000521865 SCLYQ96I15 445 aa24.41■■□□□ 1.5
PABPC1-218ENST00000521865 PRDM12Q9H4Q4 367 aa24.41■■□□□ 1.5
PABPC1-218ENST00000521865 TNKSO95271 1327 aa24.4■■□□□ 1.5
PABPC1-218ENST00000521865 HIP1O00291 1037 aa24.4■■□□□ 1.5
PABPC1-218ENST00000521865 DHX16O60231 1041 aaKnown RBP24.4■■□□□ 1.5
PABPC1-218ENST00000521865 IGHDP01880 384 aa24.4■■□□□ 1.5
PABPC1-218ENST00000521865 TXNP10599 105 aaKnown RBP24.4■■□□□ 1.5
PABPC1-218ENST00000521865 CYP2C9P11712 490 aa24.4■■□□□ 1.5
PABPC1-218ENST00000521865 CDC37Q16543 378 aaPredicted RBP24.4■■□□□ 1.5
PABPC1-218ENST00000521865 OSBPL3Q9H4L5 887 aa24.4■■□□□ 1.5
PABPC1-218ENST00000521865 B4E1Z4 1266 aa24.39■■□□□ 1.49
PABPC1-218ENST00000521865 EDNRBP24530 442 aa24.39■■□□□ 1.49
PABPC1-218ENST00000521865 NT5C2P49902 561 aa24.39■■□□□ 1.49
PABPC1-218ENST00000521865 CHMP4BP1P59074 171 aa24.39■■□□□ 1.49
PABPC1-218ENST00000521865 IMMTQ16891 758 aaKnown RBP24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms