RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 STK24Q9Y6E0 443 aa10.65□□□□□ -0.7
CTNNA1-230ENST00000521724 BCL9LQ86UU0 1499 aa10.65□□□□□ -0.7
CTNNA1-230ENST00000521724 LMTK3Q96Q04 1460 aa10.65□□□□□ -0.71
CTNNA1-230ENST00000521724 FAM205CA6NFA0 338 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 OPLAHO14841 1288 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 HEXIM1O94992 359 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 MOCS3O95396 460 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 SCTRP47872 440 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 NBPF9Q3BBW0 867 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 RASSF8Q8NHQ8 419 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 PIK3R5Q8WYR1 880 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.64□□□□□ -0.711e-6■■■■□ 21.3
CTNNA1-230ENST00000521724 MLXIPQ9HAP2 919 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 RMND1Q9NWS8 449 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 ZSWIM5Q9P217 1185 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 MAGEC2Q9UBF1 373 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 RIPOR2Q9Y4F9 1068 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 COL18A1P39060 1754 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 ZSCAN5CA6NGD5 496 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 B4DLN1 442 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 EEF1GP26641 437 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 ZBED6P86452 979 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 XRCC4Q13426 336 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 MSL1Q68DK7 614 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 RCSD1Q6JBY9 416 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 CACNA2D3Q8IZS8 1091 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 ZNF483Q8TF39 744 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 NOC3LQ8WTT2 800 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 SPDL1Q96EA4 605 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 FAM89AQ96GI7 184 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 NUP58Q9BVL2 599 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 SH2D4AQ9H788 454 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 SPATS2LQ9NUQ6 558 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 BAIAP2L1Q9UHR4 511 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 IQSEC3Q9UPP2 1182 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 ZNF142P52746 1687 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 ZNF263O14978 683 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 BUB1BO60566 1050 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 C3orf20Q8ND61 904 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 C1orf131Q8NDD1 294 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 SEC16BQ96JE7 1060 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 PLSCR2Q9NRY7 297 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 PLAAQ9Y263 795 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 LEMD3Q9Y2U8 911 aa10.64□□□□□ -0.71
CTNNA1-230ENST00000521724 PDS5AQ29RF7 1337 aaKnown RBP10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 TMEM94Q12767 1356 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 TRAPPC3O43617 180 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 MGRN1O60291 552 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 RPN1P04843 607 aaKnown RBP10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 ATF3P18847 181 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 GRIK3Q13003 919 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 ZNF174Q15697 407 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 QPCTQ16769 361 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 ACCSLQ4AC99 568 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 CFAP221Q4G0U5 840 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 ODF2Q5BJF6 829 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 CRACR2BQ8N4Y2 399 aaPredicted RBP10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 MREGQ8N565 214 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 MAB21L3Q8N8X9 362 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 HOOK2Q96ED9 719 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 GDF3Q9NR23 364 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 EXOC1Q9NV70 894 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 MYH7P12883 1935 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 TJP1Q07157 1748 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 GCOM1H8Y6P7 765 aaPredicted RBP10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 NCK2O43639 380 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 BMP15O95972 392 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 MYZAPP0CAP1 466 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 XBP1P17861 261 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 PEX19P40855 299 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 KLK7P49862 253 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 WHAMMQ8TF30 809 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 TRIM47Q96LD4 638 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 MTRQ99707 1265 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 UBAC1Q9BSL1 405 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 TTYH3Q9C0H2 523 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 NOD2Q9HC29 1040 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 KIAA1522Q9P206 1035 aaPredicted RBP10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 PCDHA13Q9Y5I0 950 aa10.63□□□□□ -0.71
CTNNA1-230ENST00000521724 ALS2Q96Q42 1657 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 MYH6P13533 1939 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 CIAO1O76071 339 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 ATP6V1G2O95670 118 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 PLEKP08567 350 aaPredicted RBP10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 SRGNP10124 158 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 TMOD1P28289 359 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 MYO1EQ12965 1108 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 GKAP1Q5VSY0 366 aaPredicted RBP10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 TYW1BQ6NUM6 668 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 HIBCHQ6NVY1 386 aaPredicted RBP10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 ANKRD13AQ8IZ07 590 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 NUP133Q8WUM0 1156 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 NSMCE1Q8WV22 266 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 CUL5Q93034 780 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 HVCN1Q96D96 273 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 THOC1Q96FV9 657 aaKnown RBP10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 EEF2KMTQ96G04 330 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 MS4A14Q96JA4 679 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 ZKSCAN3Q9BRR0 538 aa10.62□□□□□ -0.71
CTNNA1-230ENST00000521724 TUBGCP2Q9BSJ2 902 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms