RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 SMRP1Q8NCR6 262 aa9.28□□□□□ -0.92
HMBOX1-208ENST00000521516 POLR3EQ9NVU0 708 aa9.28□□□□□ -0.92
HMBOX1-208ENST00000521516 ATG2AQ2TAZ0 1938 aa9.28□□□□□ -0.92
HMBOX1-208ENST00000521516 HOXB3P14651 431 aaPredicted RBP9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 PLCD1P51178 756 aa9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 DYNLL1P63167 89 aaKnown RBP9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 FAM117BQ6P1L5 589 aa9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 TMEM179Q6ZVK1 233 aa9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 TMEM192Q8IY95 271 aa9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 CAGE1Q8TC20 777 aa9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 PHF7Q9BWX1 381 aaPredicted RBP9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 LMAN2LQ9H0V9 348 aa9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 SH2D4AQ9H788 454 aa9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 COPRSQ9NQ92 184 aa9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 PCDHGC5Q9Y5F6 944 aa9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 ATP2A1O14983 1001 aa9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 LMNAP02545 664 aaKnown RBP9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 RRP1P56182 461 aaKnown RBP9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 EXOSC9Q06265 439 aaKnown RBP9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 RBL2Q08999 1139 aa9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 COASYQ13057 564 aa9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 IQSEC1Q6DN90 963 aa9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 SNRNP48Q6IEG0 339 aaKnown RBP9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 FBXO11Q86XK2 927 aa9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 AKAP2Q9Y2D5 859 aa9.27□□□□□ -0.93
HMBOX1-208ENST00000521516 LINC01565O15544 149 aa9.26□□□□□ -0.93
HMBOX1-208ENST00000521516 NBNO60934 754 aa9.26□□□□□ -0.93
HMBOX1-208ENST00000521516 SELPP16109 830 aa9.26□□□□□ -0.93
HMBOX1-208ENST00000521516 ASTLQ6HA08 431 aaPredicted RBP9.26□□□□□ -0.93
HMBOX1-208ENST00000521516 TAPT1Q6NXT6 567 aa9.26□□□□□ -0.93
HMBOX1-208ENST00000521516 MTG1Q9BT17 334 aaPredicted RBP9.26□□□□□ -0.93
HMBOX1-208ENST00000521516 ARHGEF10LQ9HCE6 1279 aa9.26□□□□□ -0.93
HMBOX1-208ENST00000521516 CLEC1BQ9P126 229 aa9.26□□□□□ -0.93
HMBOX1-208ENST00000521516 ZFYVE26Q68DK2 2539 aa9.26□□□□□ -0.93
HMBOX1-208ENST00000521516 MPHOSPH10O00566 681 aaKnown RBP9.25□□□□□ -0.93
HMBOX1-208ENST00000521516 GTF2F1P35269 517 aaKnown RBP eCLIP9.25□□□□□ -0.93
HMBOX1-208ENST00000521516 IKBKEQ14164 716 aa9.25□□□□□ -0.93
HMBOX1-208ENST00000521516 RSPO4Q2I0M5 234 aaPredicted RBP9.25□□□□□ -0.93
HMBOX1-208ENST00000521516 TMEM63BQ5T3F8 832 aa9.25□□□□□ -0.93
HMBOX1-208ENST00000521516 CERS3Q8IU89 383 aa9.25□□□□□ -0.93
HMBOX1-208ENST00000521516 CCDC155Q8N6L0 562 aa9.25□□□□□ -0.93
HMBOX1-208ENST00000521516 FAM133AQ8N9E0 248 aa9.25□□□□□ -0.93
HMBOX1-208ENST00000521516 CTAGE1Q96RT6 745 aa9.25□□□□□ -0.93
HMBOX1-208ENST00000521516 PA2G4Q9UQ80 394 aaKnown RBP9.25□□□□□ -0.93
HMBOX1-208ENST00000521516 C5orf67F2Z3F1 127 aa9.25□□□□□ -0.93
HMBOX1-208ENST00000521516 USP5P45974 858 aa9.25□□□□□ -0.93
HMBOX1-208ENST00000521516 FAM47CQ5HY64 1035 aa9.25□□□□□ -0.93
HMBOX1-208ENST00000521516 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.25□□□□□ -0.93
HMBOX1-208ENST00000521516 LRRC8DQ7L1W4 858 aa9.25□□□□□ -0.93
HMBOX1-208ENST00000521516 ANKRD35Q8N283 1001 aa9.25□□□□□ -0.93
HMBOX1-208ENST00000521516 PDGFCQ9NRA1 345 aa9.25□□□□□ -0.93
HMBOX1-208ENST00000521516 USP15Q9Y4E8 981 aaPredicted RBP9.25□□□□□ -0.93
HMBOX1-208ENST00000521516 FLNBO75369 2602 aaKnown RBP9.25□□□□□ -0.93
HMBOX1-208ENST00000521516 ATF7P17544 494 aaPredicted RBP9.24□□□□□ -0.93
HMBOX1-208ENST00000521516 CLCN5P51795 746 aa9.24□□□□□ -0.93
HMBOX1-208ENST00000521516 CNTN2Q02246 1040 aa9.24□□□□□ -0.93
HMBOX1-208ENST00000521516 ICA1Q05084 483 aa9.24□□□□□ -0.93
HMBOX1-208ENST00000521516 KIAA0319Q5VV43 1072 aa9.24□□□□□ -0.93
HMBOX1-208ENST00000521516 CLEC10AQ8IUN9 316 aa9.24□□□□□ -0.93
HMBOX1-208ENST00000521516 INCENPQ9NQS7 918 aa9.24□□□□□ -0.93
HMBOX1-208ENST00000521516 FBXO40Q9UH90 709 aa9.24□□□□□ -0.93
HMBOX1-208ENST00000521516 TRIP12Q14669 1992 aaPredicted RBP9.24□□□□□ -0.93
HMBOX1-208ENST00000521516 MICAL3Q7RTP6 2002 aa9.24□□□□□ -0.93
HMBOX1-208ENST00000521516 RALGAPA2Q2PPJ7 1873 aa9.24□□□□□ -0.93
HMBOX1-208ENST00000521516 ASB14A6NK59 587 aa9.24□□□□□ -0.93
HMBOX1-208ENST00000521516 RB1P06400 928 aa9.24□□□□□ -0.93
HMBOX1-208ENST00000521516 UQCRFS1P1P0C7P4 283 aa9.24□□□□□ -0.93
HMBOX1-208ENST00000521516 TFCP2Q12800 502 aa9.24□□□□□ -0.93
HMBOX1-208ENST00000521516 UBALD2Q8IYN6 164 aa9.24□□□□□ -0.93
HMBOX1-208ENST00000521516 CHST13Q8NET6 341 aa9.24□□□□□ -0.93
HMBOX1-208ENST00000521516 RPGRIP1Q96KN7 1286 aa9.24□□□□□ -0.93
HMBOX1-208ENST00000521516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.24□□□□□ -0.93
HMBOX1-208ENST00000521516 AMHP03971 560 aa9.23□□□□□ -0.93
HMBOX1-208ENST00000521516 NDUFV1P49821 464 aa9.23□□□□□ -0.93
HMBOX1-208ENST00000521516 DUSP28Q4G0W2 176 aa9.23□□□□□ -0.93
HMBOX1-208ENST00000521516 KCNG4Q8TDN1 519 aa9.23□□□□□ -0.93
HMBOX1-208ENST00000521516 SUSD6Q92537 303 aa9.23□□□□□ -0.93
HMBOX1-208ENST00000521516 DHX38Q92620 1227 aaKnown RBP9.23□□□□□ -0.93
HMBOX1-208ENST00000521516 SLF1Q9BQI6 1058 aa9.23□□□□□ -0.93
HMBOX1-208ENST00000521516 SH2B1Q9NRF2 756 aaPredicted RBP9.23□□□□□ -0.93
HMBOX1-208ENST00000521516 GRM6O15303 877 aa9.23□□□□□ -0.93
HMBOX1-208ENST00000521516 ADRB1P08588 477 aa9.23□□□□□ -0.93
HMBOX1-208ENST00000521516 MYL3P08590 195 aa9.23□□□□□ -0.93
HMBOX1-208ENST00000521516 CPT1AP50416 773 aa9.23□□□□□ -0.93
HMBOX1-208ENST00000521516 FAM83BQ5T0W9 1011 aa9.23□□□□□ -0.93
HMBOX1-208ENST00000521516 TRAF7Q6Q0C0 670 aa9.23□□□□□ -0.93
HMBOX1-208ENST00000521516 EFHBQ8N7U6 833 aa9.23□□□□□ -0.93
HMBOX1-208ENST00000521516 NEUROD6Q96NK8 337 aa9.23□□□□□ -0.93
HMBOX1-208ENST00000521516 HAUS7Q99871 368 aa9.23□□□□□ -0.93
HMBOX1-208ENST00000521516 IGFLR1Q9H665 355 aa9.23□□□□□ -0.93
HMBOX1-208ENST00000521516 NOD1Q9Y239 953 aa9.23□□□□□ -0.93
HMBOX1-208ENST00000521516 NLRC5Q86WI3 1866 aa9.22□□□□□ -0.93
HMBOX1-208ENST00000521516 CYP2E1P05181 493 aaPredicted RBP9.22□□□□□ -0.93
HMBOX1-208ENST00000521516 LINC00271P0C7V0 271 aa9.22□□□□□ -0.93
HMBOX1-208ENST00000521516 SDHBP21912 280 aa9.22□□□□□ -0.93
HMBOX1-208ENST00000521516 ATXN1P54253 815 aaKnown RBP9.22□□□□□ -0.93
HMBOX1-208ENST00000521516 EVX2Q03828 476 aa9.22□□□□□ -0.93
HMBOX1-208ENST00000521516 ANGPT1Q15389 498 aa9.22□□□□□ -0.93
HMBOX1-208ENST00000521516 PTGISQ16647 500 aa9.22□□□□□ -0.93
HMBOX1-208ENST00000521516 GORABQ5T7V8 394 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms